Agra031088.1
Basic Information
- Insect
- Anthonomus grandis
- Gene Symbol
- dmrta2_1
- Assembly
- GCA_030068095.1
- Location
- CM057941.1:33111664-33136075[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-12 1.3e-07 33.6 1.7 1 22 37 58 37 63 0.94 2 2 3.5e-13 1e-08 37.1 4.7 22 47 218 243 207 243 0.95
Sequence Information
- Coding Sequence
- ATGAGTTTGCCGAATAGCGGGGTGGATATGTCGACTATAATGTCGCAGCATCCGGTTTTAGGAGCGATTCCCCCGGCTCTGTTTTTCCGCACGTCCGAACGGTATCAGAGGACTCCCAAGTGTGCTCGGTGTCGAAATCACGGTGTTGTGTCGGCCCTTAAGGGACATAAAAGttttattagcgGTTGTGATAGCGTACCACAAGCAAGGAAAACACTAAGAAAACCTGAATATCTCAGAATGGAAAAGCGATTGTTCGAATGGTTTTGCAGGCAACGTTCCAGACACATTCCCAtatcatatgaaattttagCAGCCAAAACAAAGCAAATCTACAACGATGTTTATGGAAATGAGAATTTTGCAGCCAGTCGAGGTTGCATCGCAAATTTCAGAAAAAGACATGGAAAAGCTACGAGCTTTAACGGATGTTTCGGCTATGCTCTGCTCCAAACACTAAGTGAAAACGAGATAAATCTTAATGAAGTGAATAACTGGATTGAAAATGATGACAACTTGGTATTAGATGAGATAGAAAGCAACGAAATGCATTATAGCAGCAGCGAAGAATGTGAAGATGATGACGAAAATCAAGGGAGAGAGAAAGGAGTGAAAAATGATGAAGCAGTGAAGGGCTTCAATTTATGCTTAAAatactgTCGATGGAGGGACTGTAACTGTGCAAAATGCACTTTGATAGCGGAACGTCAAAGGGTAATGGCGGCCCAAGTGGCCCTCCGAAGACAACAAGCCCAAGAAGAAAACGAGGCGAGAGAGTTAGGGATAATATTCCCGACTCCGTCTACTACGTTGGGAGAGGCGCCCCCGATGGCCCCCTTGACACCCCCGGATACCGCAGCCCCTTTGGAGATGGGCGCGGGCCCCACCACCACTTTCCATCACCATCAGAAGTCGTCGTTTGTACCGTCGGATTCGTCGGATCCTTCTAGTCCGACGTCCAAACGTGCGCGGATCAACATCGACGAATCAGACTCGGACCAGGAGGATGTGGTACCAGTGGCACCTCAGAAACTCACCACCTCTTGTCCCTCCCCCGATCCGGTGACCAGTCCAGAGGTGGACCTCAATGTGGAAGAAAACGACCCAAACACCCCCGAGAATTTATCGTTGAAGCCCAACCCTGCCAGTCCAGAACCAGTTAGCCATCCTCACTCCGACTATATTCCTCCTCACCATAGTCCAAGGTTCCCTCAGCATCCTCCTGTTACTCCCTCACCCCCGCAGAGGTCCCcggtgaatattttaatgaggGTGTTTCCGGGAAAGAGACGATCGGATGTAGAGGCTATTTTACAAAGGTGTAAAGGAGACATTCTTCAGGCGATGGAGATGATGGTGGGTGACGAGGAAGTGTCCTCGCCCTCGGCGTTCTCCCCTTTGGGTCCCCCGCACCCTTTTCACCGCTACTCACCATCGAGGAGATTCTTGGCGGCACCCTTTGCCGGTACCGGCTACTTGTCATCGATAATTAGGCCTCCGCCCGATTATCTCAGCATGATGGGGCCACTGCACGACGTTTACAATGAGAAAACCACCGCTTCCTCCCCAGGGTCTAATACTAGCTCCGATAAGACTTCGTATTCGGAGTAG
- Protein Sequence
- MSLPNSGVDMSTIMSQHPVLGAIPPALFFRTSERYQRTPKCARCRNHGVVSALKGHKSFISGCDSVPQARKTLRKPEYLRMEKRLFEWFCRQRSRHIPISYEILAAKTKQIYNDVYGNENFAASRGCIANFRKRHGKATSFNGCFGYALLQTLSENEINLNEVNNWIENDDNLVLDEIESNEMHYSSSEECEDDDENQGREKGVKNDEAVKGFNLCLKYCRWRDCNCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGIIFPTPSTTLGEAPPMAPLTPPDTAAPLEMGAGPTTTFHHHQKSSFVPSDSSDPSSPTSKRARINIDESDSDQEDVVPVAPQKLTTSCPSPDPVTSPEVDLNVEENDPNTPENLSLKPNPASPEPVSHPHSDYIPPHHSPRFPQHPPVTPSPPQRSPVNILMRVFPGKRRSDVEAILQRCKGDILQAMEMMVGDEEVSSPSAFSPLGPPHPFHRYSPSRRFLAAPFAGTGYLSSIIRPPPDYLSMMGPLHDVYNEKTTASSPGSNTSSDKTSYSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -