Acar009657.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- dmd-4
- Assembly
- GCA_905404175.1
- Location
- FR989956.1:6284249-6290279[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-25 2.1e-21 75.8 10.1 1 47 7 53 7 53 0.98 2 2 2.3 1.3e+04 -3.5 6.5 3 11 287 295 281 296 0.91
Sequence Information
- Coding Sequence
- ATGAATAGTGGAAAAGCGCGAGTACCAAAGTGCGCCAGATGCCGTAATCACGGTCTGATCTCCAGTTTACGCGGCCACAAGAAAGCGTGTGCTTATCGAAACTGTCAGTGCCCTAAGTGTGGCTTGATCAAGGAAAGACAGAGAATTATGGCAGCTCAGGTAGCACTGAAGAGACAACAAGCGGCGGAGGATAAAATAGCATTACACTTAGCATCGGTCGAGAGTGGAACATCGTTGGAGGCTTTGCCCCCCGGTCGGATCTATGGCATGAGAGTCACAGGACCGTGTCAGAGCCCTGGGCCTGAGCCTGACTCTGCTGGTGATCAAACTCCTATTCACATCGACAGTGAAACCAGTGATTCTGTACCAGACTGCTGCACTTCTCCAGATTCTTCAGGACATACAACTCTTATGTCTCGACCTTGTGTCACAACGAACGAGAATTGTAATATAGAAAGCGAAAATCCTATTAGCACTGCGGGTTTGGAGATGTTAAAAAAATTATTTCCTGGAAAAAAACGCTCCGTTTTGGAATTAGTGCTAAGACGATGTAACCACGATCTTTTACGCGCTGTTGAACATTGCAATGCTATTCAAGGTTCAAAAGAAAAATTACCTTCCACTGTACCTAATTCGTTTAACTACGAATTATCTCTATCGAATACCGAAGAACAATCAAGATGGTCTGCATTCAGACCAGTGGGCCCGCGAGCACCTTCATTGATGTCAGCGCTGGTGATGGGCCGTGTGTGCGGTTCCGACTGGCTCGTACCACTACCCGCTCTGCCTGCGTTATCCGCTCCGTTATTACTGCCCCTACAACACCCTCATGGACCACCTCCTTGCGCTCCATGTGCTCCTGATTGCCGTCAATGCAACAGCCACCATTAA
- Protein Sequence
- MNSGKARVPKCARCRNHGLISSLRGHKKACAYRNCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTSLEALPPGRIYGMRVTGPCQSPGPEPDSAGDQTPIHIDSETSDSVPDCCTSPDSSGHTTLMSRPCVTTNENCNIESENPISTAGLEMLKKLFPGKKRSVLELVLRRCNHDLLRAVEHCNAIQGSKEKLPSTVPNSFNYELSLSNTEEQSRWSAFRPVGPRAPSLMSALVMGRVCGSDWLVPLPALPALSAPLLLPLQHPHGPPPCAPCAPDCRQCNSHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00277400;
- 90% Identity
- iTF_00771128;
- 80% Identity
- -