Acar014387.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- Jarid2_6
- Assembly
- GCA_905404175.1
- Location
- CAJQEZ010000005.1:299386-303906[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-15 5.9e-12 46.2 0.0 14 89 308 380 300 380 0.87
Sequence Information
- Coding Sequence
- ATGATAACACCGGAATGCAAGTCAGGTACTAGACGTAGAAGGTTAAGATCGGATAATATGGGTCGGACGGATGTTCCATGTGCGAAGAAGTCATCCAATAGGGTAAGTATTAAGCGGCGAAAATCAAAGCTGGGAAATATGGATAGGATTGAAATCCAGATAGAGGTACAAAGTGCAAACAAAACGGTTAACAACCCAAGTACTAGCCATCAAATGTTACGGTCATTGACAAGTAGTGATGACGGAATATTGGCAACTACACCAGCTAGAAAGTCTGGTACTAGGCGTCGAAGGAATGCGTCTGAAAGAAAATATATTAAGCGTAAAAAGACAGTGACGACTATCAATGAAAGGGATCAGATTGAAGACGTGGAAAGTCCAACCATAACGGCTAACAACCCAAGTACTAGCCATCAAATGTTACGGTCATTGACAAGTAGTGTTGACGAAGTATTGGCAACTACACCAGCTAGAAAGTCTGGTACTAGGCGTCGAAGGAATGCGTCTAGAAGACAATGTATTAAGCGTAAAAAGTCAAAGACGACTATCAATGAAGGGGATCAGATTGAAGACGTGGAAAGTCAAACTACAACGGCTACTAAGCCAAATACTAGTCCTGACAGGTTTCGTACTCTAAGCAGTGATGACGAAGTATTGGCGAAAAAGAAAAGGGATATTACGGTCTTACAGGAGGCGCCAGTTTTCAAGCCAACTAAAAAAGAATTTGAAGATCCAATAAAGTATTTTGAAAGTATAATGCCAAAGGCATCAAAATATGGGATTTGTAAAGTAATACCACCAGTTGCATTCAAACCCTCTTGCCATCTCAATGTAATGATGCCATTTGTAGTAACAAACCAGTACATAGCTAGAATGTTCCGGCGCTGGGGTCCATCCACTAGTATACTTGCTGCAATTATAGCGGCCCAAAGAGAGACTTTTAAAAGACCACCATTGCTTGGCAGCATCGAAGTTGATCTTCCTAAGCTTTTTAATACAGTGATCAGTATGGGAGGCCTTTCAAGTGGCTTCACTCACCAAAAATGGACTAAAGTAGCTGAAATGCTTAAATACAATCATGTTAAAAGGCCCGGTTCAAGACTCGAGGCCATCTATGTTAAATATCTGCTTGCATATGAAATATTGACTCTTACCGAACGGAAGCTACTGATAGAAGTAGTGAGAGAGCATTGGACCAAAAGAGAGAAATTAATGCTGAAAAGGTCCTCTGATCCGGACTACAACAGGAAAGTGATACTCGGCGAGTTACACGGGTCAACCGAGCCTAAAAATACTGGCGGTTTTGAAACAAATAAAGAGATGAACATATTCAACTTTCTCGCAGAAACCGAGGATTGTGTGGCCAAAGGCCGAAAAGCTAATTTGACATCATTCAAGAAAATGGCTCAGTATGCGTCAAACATACTATTGGCGTCTCGCGGTATGGACACTGATAGCATCGAGAAGGCCTATTGGGATCTGATTAAGTCGGGCACTGAGCATGTTTGCGTGAACGCCTCATCAATCGACACTGCCACTAGTAACGACGGTTTTCCAGAAAATGAAGTGAACAACCAATATCCTTGGAACTTGAAAAGATTGAGTGAGTGCACTCAAAATATGCTGAGTTTTTTGGGCCCAGTTTTGGGCATGACGGTGCCCACTTTGCACCTGTCTATGGTGTTTTCTACGAGTTGCTGGCACCGAGACCCACACGGTCTGCCGTGGATAGAGTACATGCACGAGGGAGCCGATAGGGTGTGGTATGGCGTAAGTGACGAACAAGATGAAACTTTCCGAAAGGCAGTCGAAACGCTGTGCCCATTATATTTCCAGAAAAAGTCAGTTTGA
- Protein Sequence
- MITPECKSGTRRRRLRSDNMGRTDVPCAKKSSNRVSIKRRKSKLGNMDRIEIQIEVQSANKTVNNPSTSHQMLRSLTSSDDGILATTPARKSGTRRRRNASERKYIKRKKTVTTINERDQIEDVESPTITANNPSTSHQMLRSLTSSVDEVLATTPARKSGTRRRRNASRRQCIKRKKSKTTINEGDQIEDVESQTTTATKPNTSPDRFRTLSSDDEVLAKKKRDITVLQEAPVFKPTKKEFEDPIKYFESIMPKASKYGICKVIPPVAFKPSCHLNVMMPFVVTNQYIARMFRRWGPSTSILAAIIAAQRETFKRPPLLGSIEVDLPKLFNTVISMGGLSSGFTHQKWTKVAEMLKYNHVKRPGSRLEAIYVKYLLAYEILTLTERKLLIEVVREHWTKREKLMLKRSSDPDYNRKVILGELHGSTEPKNTGGFETNKEMNIFNFLAETEDCVAKGRKANLTSFKKMAQYASNILLASRGMDTDSIEKAYWDLIKSGTEHVCVNASSIDTATSNDGFPENEVNNQYPWNLKRLSECTQNMLSFLGPVLGMTVPTLHLSMVFSTSCWHRDPHGLPWIEYMHEGADRVWYGVSDEQDETFRKAVETLCPLYFQKKSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114719;
- 90% Identity
- iTF_00114719; iTF_00114720;
- 80% Identity
- -