Acar014390.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- Jarid2
- Assembly
- GCA_905404175.1
- Location
- CAJQEZ010000005.1:317063-327034[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-15 7.7e-12 45.8 0.0 14 89 308 380 300 380 0.87 2 2 7.3 1.1e+04 -2.7 0.0 35 82 636 685 625 688 0.71
Sequence Information
- Coding Sequence
- ATGATAACACCGGAATGCAAGTCAGGTACTAGACGTAGAAGGTTAAGATCGGATAATATGGGTCGGACGGATGTTCCATGTGCGAAGAAGTCATCCAATAGGGTAAGTATTAAGCGGCGAAAATCAAAGCTGGGAAATATGGATAGGATTGAAATCCAGATAGAGGTACAAAGTGCAAACAAAACGGTTAACAACCCAAGTACTAGCCATCAAATGTTACGGTCATTGACAAGTAGTGATGACGGAATATTGGCAACTACACCAGCTAGAAAGTCTGGTACTAGGCGTCGAAGGAATGCGTCTGAAAGAAAATATATTAAGCGTAAAAAGACAGTGACGACTATCAATGAAAGGGATCAGATTGAAGACGTGGAAAGTCCAACCATAACGGCTAACAACCCAAGTACTAGCCATCAAATGTTACGGTCATTGACAAGTAGTGTTGACGAAGTATTGGCAACTACACCAGCTAGAAAGTCTGGTACTAGGCGTCGAAGGAATGCGTCTAGAAGACAATGTATTAAGCGTAAAAAGTCAAAGACGACTATCAATGAAGGGGATCAGATTGAAGACGTGGAAAGTCAAACTACAACGGCTACTAAGCCAAATACTAGTCCTGACAGGTTTCGTACTCTAAGCAGTGATGACGAAGTATTGGCGAAAAAGAAAAGGGATATTACGGTCTTACAGGAGGCGCCAGTTTTCAAGCCAACTAAAAAAGAATTTGAAGATCCAATAAAGTATTTTGAAAGTATAATGCCAAAGGCATCAAAATATGGGATTTGTAAAGTAATACCACCAGTTGCATTCAAACCCTCTTGCCATCTCAATGTAATGATGCCATTTGTAGTAACAAACCAGTACATAGCTAGAATGTTCCGGCGCTGGGGTCCATCCACTAGTATACTTGCTGCAATTATAGCGGCCCAAAGAGAGACTTTTAAAAGACCACCATTGCTTGGCAGCATCGAAGTTGATCTTCCTAAGCTTTTTAATACAGTGATCAGTATGGGAGGCCTTTCAAGTGGCTTCACTCACCAAAAATGGACTAAAGTAGCTGAAATGCTTAAATACAATCATGTTAAAAGGCCCGGTTCAAGACTCGAGGCCATCTATGTTAAATATCTGCTTGCATATGAAATATTGACTCTTACCGAACGGAAGCTACTGATAGAAGTAGTGAGAGAGCATTGGACCAAAAGAGAGAAATTAATGCTGAAAAGGTCCTCTGATCCGGACTACAACAGGAAAGTGATACTCGGCGAGTTACACGGGTCAACCGAGCCTAAAAATACTGGCGGTTTTGAAACAAATAAAGAGATGAACATATTCAACTTTCTCGCAGAAACCGAGGATTGTGTGGCCAAAGGCCGAAAAGCTAATTTGACATCATTCAAGAAAATGGCTCAGTATGCGTCAAACATACTATTGGCGTCTCGCGGTATGGACACTGATAGCATCGAGAAGGCCTATTGGGATCTGATTAAGTCGGGCACTGAGCATGTTTGCGTGAACGCCTCATCAATCGACACTGCCACTAGTAACGACGGTTTTCCAGAAAATGAAGTGAACAACCAATATCCTTGGAACTTGAAAAGATTGAGTGAGTGCACTCAAAATATGCTGAGTTTTTTGGGCCCAGTTTTGGGCATGACGGTGCCCACTTTGCACCTGTCTATGGTGTTTTCTACGAGTTGCGGCCACCGAGATCTACACGGTCTGCCGTGGATAGAGTACATGCACGAGGGAGCCGATAGGGTGTGGTATGGCGTAAGTGACGAACAAGATGAAACTTTCCGAAAGGCAGTCGAAACGCTGTGCCCATTATATTTCCAGAAAAAGTCAGTTTGGATGCAGTCGGATATGACTATGATACCACTGAATCTCCTTAAACAGTACAGAGTCTCCTTGTGCCGAACGGTACAGAAGCCTGGCGAGTTTATATTAGTCTGCCCGAAAGCATATTCCTCTTCAGTTGCAACAGGATATTCTGTGTCGGAAAGTGTCTACTTTGCCACCTTAGCGTGGATTCAAAATATAGACCAGGTCTTCCAGCGACTGACCTATTTAAACGAAACGTGTTGTCTTCGTCTTTCCACCCGCCGGAGGCGGCGGAAAGACGGAACCCTGATATCGCCAGAAGATGGCATGCAGGGGGAAGCGGGGTCGCGCCCTAACAAAATAGGGCGGTCGTTGGAGTGGGCGCAGAAATTGCGCACTCGGGCGATCACCGGCACGCTCCGCGGATGA
- Protein Sequence
- MITPECKSGTRRRRLRSDNMGRTDVPCAKKSSNRVSIKRRKSKLGNMDRIEIQIEVQSANKTVNNPSTSHQMLRSLTSSDDGILATTPARKSGTRRRRNASERKYIKRKKTVTTINERDQIEDVESPTITANNPSTSHQMLRSLTSSVDEVLATTPARKSGTRRRRNASRRQCIKRKKSKTTINEGDQIEDVESQTTTATKPNTSPDRFRTLSSDDEVLAKKKRDITVLQEAPVFKPTKKEFEDPIKYFESIMPKASKYGICKVIPPVAFKPSCHLNVMMPFVVTNQYIARMFRRWGPSTSILAAIIAAQRETFKRPPLLGSIEVDLPKLFNTVISMGGLSSGFTHQKWTKVAEMLKYNHVKRPGSRLEAIYVKYLLAYEILTLTERKLLIEVVREHWTKREKLMLKRSSDPDYNRKVILGELHGSTEPKNTGGFETNKEMNIFNFLAETEDCVAKGRKANLTSFKKMAQYASNILLASRGMDTDSIEKAYWDLIKSGTEHVCVNASSIDTATSNDGFPENEVNNQYPWNLKRLSECTQNMLSFLGPVLGMTVPTLHLSMVFSTSCGHRDLHGLPWIEYMHEGADRVWYGVSDEQDETFRKAVETLCPLYFQKKSVWMQSDMTMIPLNLLKQYRVSLCRTVQKPGEFILVCPKAYSSSVATGYSVSESVYFATLAWIQNIDQVFQRLTYLNETCCLRLSTRRRRRKDGTLISPEDGMQGEAGSRPNKIGRSLEWAQKLRTRAITGTLRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114719;
- 90% Identity
- iTF_00114721;
- 80% Identity
- -