Ayam010925.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- -
- Assembly
- None
- Location
- AY:490308-494335[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.025 1.2e+02 2.6 0.0 22 48 205 231 199 235 0.83 2 9 0.0012 5.9 6.8 0.6 21 46 232 257 228 259 0.90 3 9 7.2e-05 0.35 10.7 0.1 21 52 260 291 258 291 0.89 4 9 0.00033 1.6 8.6 0.1 21 52 288 319 285 320 0.87 5 9 0.00033 1.6 8.6 0.1 21 52 316 347 314 347 0.89 6 9 0.00051 2.5 8.0 0.1 21 46 344 369 342 372 0.92 7 9 0.001 5.1 7.0 0.1 21 52 372 403 370 403 0.88 8 9 0.00019 0.95 9.4 0.0 21 52 400 431 397 431 0.89 9 9 0.0061 30 4.6 0.0 22 46 429 453 426 456 0.84
Sequence Information
- Coding Sequence
- ATGGTCTTTTATGGCAGCGAGTTCGCAAATGCACTCCATATAGATCTACGACGGTATAACTCCCCACCCGGATACGCACAGAAATTTGGTGTGCCTTTAGTTAATAAGCCTAAGACAATAGAAAAGGGCAGCAAAGAAGATACGAAAAAACGTAATAAAGAAGATACATTAGATTCCCCATGTTTATTTAAACAGCAAAAATTGACTGCAAAAAAGGAATCCCCTCAAAATATATCATCAGATATTATAATAAACATTCCTGAAGCAACCAAACAGATAACTTTTAAAGGAATTCATACAGACAGTAACATTGAAACTTTTGTAGGCAATGATTGTAGCAAGCGACTTACTTCCAAACATAATATAACATGCCTTGAACATAAATCGGAATTAATCAAAACGCCTTTAGCAAAACAAAACGTATTAGATGTCCATGAAACTAAAAACATAAATAGTTCATCGGTGAAAACTTCATATGCATATAAAGTAAGCGATGATCTAGAAGTAAAATTAGTCGAACATGTAAAAGAGAAAAGGCTTACAGATCATACGGATAGTTATGAACGTAATCAATCTGGTAATCTAGAAACCCATATAAAGACGTATACAGAAGAGAAGTCGTACGCATGTGATATTTGCAAATATAAAACTAAACAGAAGAGTTCTTTAAAAGAGCATATGAGAGTACATACAGGAGAGAAACCGTTCGCATGTGACATCTGTCATTATAAATGTAAACGAAAAGGTTGTTTAAAAAGACATATGAGGTTACATACAGGGGAAAAACCCTTCGCATGTGACATTTGTCATTATAAATGTAGAGAAAAAGGTAATTTAAAAGCACACATGAGGTTACATACAGGAGAAAAACCGTTTGCATGTGACATTTGTCATTATAAATGTAAACGAAACAGTGATTTAAAAAAACATATGAGGTTACATACAGGCGAAAAACCCTTCGCATGTGACATTTGTCATTATAAATGTAAACAAAACGGTCATTTAAAAACACATATGAGGTTACATACGGGGGAAAAACCGTTCGCATGTGACATTTGTTCATATAAATGTAGACAAAAAGGTTCTTTAAAAACACACATGAGGTTACATACAGGGGAAAACCCCTTCGCATGTGACATTTGTCATTATAAATGTAGAGAAAAAGGTTCTTTAAAAACACACATGAGGTTACATACAGGCGAAAAACCGTTCGCATGTGACATTTGTTCATATAAATGTAGAGAAAAAGGTAATTTAAAAATGCATATGAGGTTACATACGGAGGAAAAACCGTTCGCATGTGACATTTGCAAGTACAAGTCTAACTGGAGAAATGCTCTTAAAAGGCATCTGAAAATTCATAACAAAAAATGA
- Protein Sequence
- MVFYGSEFANALHIDLRRYNSPPGYAQKFGVPLVNKPKTIEKGSKEDTKKRNKEDTLDSPCLFKQQKLTAKKESPQNISSDIIINIPEATKQITFKGIHTDSNIETFVGNDCSKRLTSKHNITCLEHKSELIKTPLAKQNVLDVHETKNINSSSVKTSYAYKVSDDLEVKLVEHVKEKRLTDHTDSYERNQSGNLETHIKTYTEEKSYACDICKYKTKQKSSLKEHMRVHTGEKPFACDICHYKCKRKGCLKRHMRLHTGEKPFACDICHYKCREKGNLKAHMRLHTGEKPFACDICHYKCKRNSDLKKHMRLHTGEKPFACDICHYKCKQNGHLKTHMRLHTGEKPFACDICSYKCRQKGSLKTHMRLHTGENPFACDICHYKCREKGSLKTHMRLHTGEKPFACDICSYKCREKGNLKMHMRLHTEEKPFACDICKYKSNWRNALKRHLKIHNKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114338;
- 90% Identity
- iTF_00114338;
- 80% Identity
- iTF_00114338;