Ayam001331.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- RFX7
- Assembly
- None
- Location
- AY:78717-105605[-]
Transcription Factor Domain
- TF Family
- RFX
- Domain
- RFX domain
- PFAM
- PF02257
- TF Group
- Basic Domians group
- Description
- RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-34 3.8e-30 104.0 0.0 3 78 150 225 148 226 0.98 2 2 2 1.5e+04 -3.6 0.0 38 57 985 1004 975 1005 0.67
Sequence Information
- Coding Sequence
- ATGGATAGTACAAATCCATTTCAGCCTTGGGCACCTGATGATAGTGCAAAAATCGTTAAATCCGAGAGAGAAGTAGTGGATGACGCGAAACTTCATCGGGAAAATGTCAATCATCCAAAACATAGGCAAACTGCGTCTTATGATAAAGAAAGTGTCGTCGTTCCAATCAACGTCCCAGGATCGTCGATTGCAACTAGTCCTGGTGGGGATTCTCCTCGAATTAGAGAGCCTATAATGGACTCTAGCAAAATAACTTCTATGCAGCAAATCGTAGAGAACACCCTCAGTCAAGAGGGACGACAGCGAGTTGCACAGCTACTTGAAGCAGTAGAAGCATTAGGCAGTGCTGAGAGATTACTTTTGTACCTGAGATTGCCAACAGGTGTCCCTCCACATGATCCCCTGAAACAGCCCATTAACCCATTAGGTTCCAGGGCTGAACTTCAGCAGACTGTAACATGGATACAGACGCACTTAGAGGTTGACCCAGATGTCTCATTACCGAAGCAGGATGTTTATGACGAATACATTGCACATTGCATGAGCAGCAATATGAAGCCTCTGTCTACCGCTGATTTTGGAAAGGTCATGAAACAAGTATACCCCAGCGTTCGACCTCGTCGACTTGGAACTCGTGGTAATTCCAGGTATTGCTACGCTGGTCTTCGAAAAAAGATCAAGTTGGAAGTGCCTCAATTACCTGATTTAGGAGAAACATCGAAGGAACCAAATGTAACATCTAGAGTAACAGAAAGAATAGTATGCGACTGGGCTGAAACGAAATTAGGTACGAAGTTTGCGAATATATCGGAACTATCTCGACATTTAATCTCAATGGGCTCCTCGACAGTCGCTCCTCTTGGACCGCATAGCGCCTCTCCGCCTCCACAACTCACGCAGGCTCACGTGCCGGCAGAGGAAGCAACAAGTCGGCAGTTAATTAAACACTTGAAACGTAAAATGCAGGCTCAAGGTACACCCGGTCGACCTAAAAAGAACAAAGGTCAAGAAGCAGTCGGAGAATCCCCACCATCTACATCATACGTAAGCCATCACCCGCCTCTGAAACATGAAAACGAAGCGAGTGAGCCAGGTTACGGCTACCAACCGGCGTACATGCCAGTTTATGATGTACGCCCTCCGTTCCCGGCGTACTCGGCGCCTCCGCGCGCTCACCCCCCTCACATACCACATTCGGTGCATCCGAGTGGTGCATCGCATCCCACTATGTCCGTCCACGAATTCCGGCCTGAGCCTTACGTGTTCGAGACGCCGTACGCGCCACGTGACCTTACCCTGCCTTCCGATGCTTCCCATAATCTGCCCATTAACTTGAGTAGCGACGCATCTCTCGACTTGTCTACGGAACGCACCGAATGGCAACGTCGACGACCCCCCGAACCCCCTCCGCCGCCAACTCGCCTCTCTTTACCTGGTAAGAAGCTTATTCTCGAGACATACCAGAGCGAAACACGAGCGAGTTCTCCTCGTTCTTCTCAAACAGATTCTCGTCTAGTGCAACAGCCACAGGATTTCCCGCGTACAGAGTACTTGCCGAAAAAAATGAGAGCTTCCGAGATTCGAGGTGGAAAGCATGCATTTACGCGTCAGGCCCAAGTGAGTGCCGAAACAACATCTACTACCTCCGCACCAGTCGCAGAGCCCTCCGTTCGTTCCGAGGTTGCTTTTTTAGAGGATCCAAAAAACTTAACGAGCCGGTCCAAAAGCACCGCCGCGGCGCTGGCCCGGGAGGAACAGGAGGCGGCGAGTCCCACGCGATCGGTGAAGACTCCGACGTCTGAGTCCGAACGCACTAAACTTCGAAAGATTAATAGCCGACCGAGGGGACCTACGCCGGATCGCGCGGGATCGCCCGACCGACCCCCGACGCCCGATTCGTGTTGCGGCCTCGACGGGATCAATATCAAAACCGGGATGATTTGTGAGGAGAAACATTCGGAAATACTCAACAGAGAACGGGTTATTAGTATATGTAATATAGATAAACATGACTTGGACGATTATTTGAACGAAGGCAATAGCCAGGAACATGAGGAGGAGCTCTTGCAGTATTTTCATCAGCGATCTGCGCAATTGAACGCACACACGGATGTGACGTCAGATAGTACTTCTTTTTTGGAGGCAGGCCAAGACCCACAAGACGAGCACAGCCAGGGAAAAAATGAAAGGTTATCTCAGTTGCGGGAACTGTTAGCAAAAAATTTAAAACATCAGAGTGGGTTAAATTCTCAAAATACGTCATTTAATCAAGATCCTCAATTATCTCAGGAAAATTCATGTGATTTACCCACGAAAACTATTATCACTGATGGGGCTTTTAAAGCTCTCGTATCCGATGAGACGGACATAGTGGAGGCCGCCATAGTTAGTCGAACTGAAGTAAACAATGTTAAATCTTGTAATTCAACTGCTATTGAGAATGGAACATCATTATCCTATAACAATGGTGTTGCGAATAATCAAATTATGACAAATGTTGTTGGTCCACATATCTACAATGGGCATAACCATAACGATCCCCAAAGCCCTACTACTAGAACACAGCAATATGATTTCGTACCTATCTCAGATGGTTGTCACTCACCAGGGAATTTCCATTCAAAATCTCCTCTAGGATTTAATCAAAGAGGACAGAGTCCGTCAAAAGTAAAGAAGCAAGTTATAATGGGTGGTTCCTTACAGACTTCACCGATTTCGCACAGTACAGCTGCTAGCCCATTCGTAAGTCCAAGAAACACACCGGTCCCGCGGTCGCGTCTTTGCCCTCGGCCTATACCAAAACACAATGGTAGAAAGAGACGTAACCCTCTATCGTTGGGAGTCAGTGATCCATGTTCGAAGCAATTTGCTATCCCTACTGAGCAGAAATTCATTTCCAAATTACCGGTTTCTGATCCGGGGAAATATTGTCAACCTATGTCAGCTCCACCATCACCGAATATACTTCCATCACAATTCAAGAACCTAATATATCAATGCCATCCAGGAATCCAAAATGGTAATAACAATCTCTGTTTAAATTTTATGCCAAATCCAACATTCCGAGATCATGTAAATGGCGATCAACCAACGTCAGCTGATCCACTCTCTAGCGAAGTGAGTCAGTTTTTCCAAGATTCACTTGTTACTTTTAGACCAGGACACGATGCGTTTAGGTCACAATCAGTGCCACTCAAACAAGGCATAAACAACATGGTTGGTTTATTGAGTTACAACAATACTCCTGTAGGATCTGTACCGCCTACCCCCGTCCCTAATGAGTTTTGCGATTTCGGCTCCCTCGCCGAGGCTTGTGACATTTCTAAAGCCGGTCTCAATAGAGAGACGCTCGATAAGATTTATAATGCCATTGATAGTAGCAATGATGTACTTAATACGGATACAACTCAAAGTATACTAAATTCGAATAATACCTTGAGTAATGGCTGTGATCCTCTACCTAGTCAGTCGATCCTTTCTGACCAGTTAACATCCCTCATTCCGAGCGGTGATGATTTACTTGACAGGAGCAACCAATTCAATCAACCGTTCATAAATGATGGGAACGGAACTGATAATGTAGAGGATTTTTTAAAACGAGCAAATAGTATGGAGTTCGACTTACCAGATTTGGTATCCGATAAGAATAAATATTACACGTCACGTTCCGTACCGAGCACACCTTTACCGTACAAACGTACGGCCTCGAATCTACAAATCGATTCGCGTCGTTCCCGGGAGCTTTTCGCTTCAGATAACTACTCCACCGTGTCTAACGGGATATCATCAAAATCAGTGCCATCAACACCACAGTTCGCCGAGGATAGGAACATTTTTAACTATAGCAACAGAGATTTTCTGATAAATGGTAATTCAGTTTGTGGTTCCGCACAAGTTCATGAGACTGTAGTGGATAATGACCAATCGTTAGCTTCGCCGCTGCACGATATGTTGCGCGAAGACATACTAGGTGAACCGTTGACACCCGCCTTGCTGGCTGACCTCGACAAAATAGACGAAACCCCGTATGTCGACCTCTAG
- Protein Sequence
- MDSTNPFQPWAPDDSAKIVKSEREVVDDAKLHRENVNHPKHRQTASYDKESVVVPINVPGSSIATSPGGDSPRIREPIMDSSKITSMQQIVENTLSQEGRQRVAQLLEAVEALGSAERLLLYLRLPTGVPPHDPLKQPINPLGSRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHCMSSNMKPLSTADFGKVMKQVYPSVRPRRLGTRGNSRYCYAGLRKKIKLEVPQLPDLGETSKEPNVTSRVTERIVCDWAETKLGTKFANISELSRHLISMGSSTVAPLGPHSASPPPQLTQAHVPAEEATSRQLIKHLKRKMQAQGTPGRPKKNKGQEAVGESPPSTSYVSHHPPLKHENEASEPGYGYQPAYMPVYDVRPPFPAYSAPPRAHPPHIPHSVHPSGASHPTMSVHEFRPEPYVFETPYAPRDLTLPSDASHNLPINLSSDASLDLSTERTEWQRRRPPEPPPPPTRLSLPGKKLILETYQSETRASSPRSSQTDSRLVQQPQDFPRTEYLPKKMRASEIRGGKHAFTRQAQVSAETTSTTSAPVAEPSVRSEVAFLEDPKNLTSRSKSTAAALAREEQEAASPTRSVKTPTSESERTKLRKINSRPRGPTPDRAGSPDRPPTPDSCCGLDGINIKTGMICEEKHSEILNRERVISICNIDKHDLDDYLNEGNSQEHEEELLQYFHQRSAQLNAHTDVTSDSTSFLEAGQDPQDEHSQGKNERLSQLRELLAKNLKHQSGLNSQNTSFNQDPQLSQENSCDLPTKTIITDGAFKALVSDETDIVEAAIVSRTEVNNVKSCNSTAIENGTSLSYNNGVANNQIMTNVVGPHIYNGHNHNDPQSPTTRTQQYDFVPISDGCHSPGNFHSKSPLGFNQRGQSPSKVKKQVIMGGSLQTSPISHSTAASPFVSPRNTPVPRSRLCPRPIPKHNGRKRRNPLSLGVSDPCSKQFAIPTEQKFISKLPVSDPGKYCQPMSAPPSPNILPSQFKNLIYQCHPGIQNGNNNLCLNFMPNPTFRDHVNGDQPTSADPLSSEVSQFFQDSLVTFRPGHDAFRSQSVPLKQGINNMVGLLSYNNTPVGSVPPTPVPNEFCDFGSLAEACDISKAGLNRETLDKIYNAIDSSNDVLNTDTTQSILNSNNTLSNGCDPLPSQSILSDQLTSLIPSGDDLLDRSNQFNQPFINDGNGTDNVEDFLKRANSMEFDLPDLVSDKNKYYTSRSVPSTPLPYKRTASNLQIDSRRSRELFASDNYSTVSNGISSKSVPSTPQFAEDRNIFNYSNRDFLINGNSVCGSAQVHETVVDNDQSLASPLHDMLREDILGEPLTPALLADLDKIDETPYVDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00186872;
- 90% Identity
- iTF_00113079; iTF_01317017; iTF_00112254; iTF_01316063;
- 80% Identity
- -