Aper015286.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHABGR00000022:8854471-8861677[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00064 13 6.2 0.0 24 48 93 117 75 120 0.84 2 8 0.041 8.5e+02 0.4 0.0 25 44 153 172 139 179 0.80 3 8 0.31 6.5e+03 -2.4 0.0 21 32 179 190 170 202 0.73 4 8 0.0076 1.6e+02 2.7 0.0 25 48 212 235 209 238 0.88 5 8 0.00086 18 5.8 0.0 26 46 272 292 262 298 0.89 6 8 0.00016 3.4 8.1 0.3 25 48 339 362 327 365 0.86 7 8 0.00059 12 6.3 0.1 24 48 366 390 362 393 0.90 8 8 0.0053 1.1e+02 3.2 0.2 22 50 394 422 391 426 0.85
Sequence Information
- Coding Sequence
- ATGGAAGAAGCTACTGTCAAAGTAGATGCTATAGATTATTCTGATGCTGAAGATAGTGAAAGTGAGGTACCTTTAGCATTTGCTTTCAAGAGAGATGTTTCTAACAATAGATCCAATGTTTTTGATGGCAATGAGTGTACTTCAAAATTGACTACTAAAACTGAGAAATTAAGTGAAAGCGAGTATGAGCAGAAGGAACATACAGAAGATAGCATTGATGAAGTGCCAGGCACAAGATTAAAGGATACTGTAAAACAAGTTAATAATAAGACTGATGAAGCATATTGCCAAATCTGCAACAAAAGGTTCAAGACAAATGCTAATTTAAGACAACATATAAAGCACATACATTCTGATGAGTATTTCGTTGAGTGTGATAAATGCGAGCGCACGTTCAAATCACGCGCACATCTTAAATCTCATGTGGACTGCGCTCATCCAAAACCCGGGACAGAAGCGAAGTGTGATATATGTGACAAGGTCTTCATAAATAAGAAAAAGTTGAGCAACCACAAGTACTATACTCATGCTACACCAGAGGAGAAAGTCACCTGCAAGCTCTGTAACAAAACATTTATGAAACAGTACAAATTAAATGTGCACAATCGTCAAGTACATGCATTGTATAGCAGTGTAACCTGTGACATTTGCGGGAAGCCCTTCAAGAATGAGATGCTTTTACGAAGACACGCAAAATGGAGTCATCCAACTGATCGGATGGATCACAAATGTGAAGAATGCGGAAAGGACTTTCCCTCCTGGAGACATTACAAAAAGCATAAAGAGAATGCACACTCTTTGTTAGATGGTTTAACATGTGATTTGTGTAAAAGGGTTCTGGCGAATAAGAAGTCCTTAGCAAGACATTTGAAGACGCACAGTTTAGGGAAAATCTTCAAGACGAAGCCGAAAGACGCTGAGTTCATATGCACGATATGCGAAAAGACATTTAGCAGTAAAACTTCTCTGTTCTGGCACAACGAGAAAGACCATTCAGAGACTTATCAACTCAGGAAGACTTGCCACATCTGTTCTAAGGATTTTTCTGATCAGCACGTCCTAAGACGGCACTTGGAAGCGGTGCATCCAATCGAAACAGCGACATGTAAGGTTTGCAATAAAATCTTCAAATCGGCATTAAATCTAGAGAGTCATATGAGGACTACCCACGCGCCTCCGGAAGCGGCGAAAACTTGCGACGTATGCCACAAGACATTCAAATGTGGGATGCATCTTCGTATTCACATAAGCGCGGTGCACCCGGCAGAGGGCTCTGTGGTGTGCGACATCTGTAACAGAACCTTCGTCTCGAAAAGGTATTTGTACTCGCACAAGAAGATCCACGTGAAAAAGAGAGAATTTGACTGTGGAGTTTGCGGGAAATCGTTCAAACGGCAAGTAGACGTTGGAAAGCATGTCAGGAAAGTTCACAAGAAACAAAAGACCACAGTTTCCCGATGCTTAAAGTGTAATTCGTGCTTCAGTAACGACGATGAACTGCATCAGCATATCATCAGCTGTACAGCTGGTGACACTAAGATTGAAACACTTAAAGTAATCAAAGTTGAGATCGTTGAGGAATGA
- Protein Sequence
- MEEATVKVDAIDYSDAEDSESEVPLAFAFKRDVSNNRSNVFDGNECTSKLTTKTEKLSESEYEQKEHTEDSIDEVPGTRLKDTVKQVNNKTDEAYCQICNKRFKTNANLRQHIKHIHSDEYFVECDKCERTFKSRAHLKSHVDCAHPKPGTEAKCDICDKVFINKKKLSNHKYYTHATPEEKVTCKLCNKTFMKQYKLNVHNRQVHALYSSVTCDICGKPFKNEMLLRRHAKWSHPTDRMDHKCEECGKDFPSWRHYKKHKENAHSLLDGLTCDLCKRVLANKKSLARHLKTHSLGKIFKTKPKDAEFICTICEKTFSSKTSLFWHNEKDHSETYQLRKTCHICSKDFSDQHVLRRHLEAVHPIETATCKVCNKIFKSALNLESHMRTTHAPPEAAKTCDVCHKTFKCGMHLRIHISAVHPAEGSVVCDICNRTFVSKRYLYSHKKIHVKKREFDCGVCGKSFKRQVDVGKHVRKVHKKQKTTVSRCLKCNSCFSNDDELHQHIISCTAGDTKIETLKVIKVEIVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00113478;
- 90% Identity
- iTF_00113478;
- 80% Identity
- iTF_00113478;