Aper005384.1
Basic Information
- Insect
- Antheraea pernyi
- Gene Symbol
- lrrfip2
- Assembly
- None
- Location
- GWHABGR00000023:324780-331309[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-58 1.4e-53 182.4 14.5 58 292 38 266 19 271 0.89 2 2 0.075 1.6e+03 -1.7 9.0 116 166 240 294 236 303 0.57
Sequence Information
- Coding Sequence
- ATGACGGCAAAATTCCGGCAGTTTTCAGTAAATTTCTGTATTACCATAATCTGTAGTTACTACGATGATCTTACAACAGAGACGGTGGGGAGGCGCGCCGGTGGGCGACTCGCTGCGCTCAGTCCGGGCGGAGTGCACTCCCCCCGACGCAGTTCCGAAGACTCCACTGATGAGGCGTTCAGTATTAAAGACCTCAGGCACGAGCTGAAGGAGGTCGAAGAGAAATTCCGCAAGGCAATGATACTGAATGCGCAGCTGGATAACGACAAGGCGGCGCTCGGCTATCAACTAGAACTGCTCAAAGATAGGATAGAAGAACTCCACGAAGAGTACGCGCAATTGCAGCGCGAGCACAAGGAGAAATGCTCGGCTCACGAGCGGTTAAAGCGCGAGCACGGGTCGCTCGAGCGGGAGGTGGAGGGCGCGCGGGCGGCGGTCGTGGCTCGCGAGGCGGCCGCCGCGGCCGCGGGGTTCGCGTTCGTGGAGGCGGGGGCGGGGGTCGAGGGGGCGGAGGGGTGCGGGCCGGTGCCGGCGCTCGCGCTCGTCTCGCACCAGGCACAGGCGCTGCTCAACGATGCCGGCGAGGGCACGCTCGATGTCCGATTGCAAAACCTCGTGAGCTCGAAACAAGCGTTAGAGTCAGAAGTTCGTAAGCTGAAGTTGCAGTTGAACGAGGAGCGCGCCGCCCGACAGAACGGTGTCGCCTCGCACAACGATCAAGAGTACGAAAACGAACCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCCGCCTGCAGAGGGAGGCGAGAGAAGCCCTCAACCGGGTCGAAGAGTTGGAGACGGAGAACAGTCACCTCACGAAGCGTCTCGACAAGCTCAAGAACGCGAAATCAGCGCTCCTGAAAGACCTGTGA
- Protein Sequence
- MTAKFRQFSVNFCITIICSYYDDLTTETVGRRAGGRLAALSPGGVHSPRRSSEDSTDEAFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHGSLEREVEGARAAVVAREAAAAAAGFAFVEAGAGVEGAEGCGPVPALALVSHQAQALLNDAGEGTLDVRLQNLVSSKQALESEVRKLKLQLNEERAARQNGVASHNDQEYENEPRQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114120;
- 90% Identity
- -
- 80% Identity
- -