Basic Information

Insect: Antheraea assamensis
Gene Symbol: ZEB1
Assembly: GCA_035772565.1
Location: JAQQSE010000099.1:450421-461074[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00019 0.015 16.4 2.0 2 23 299 321 298 321 0.95

2 11 0.013 1 10.7 6.5 1 23 327 349 327 350 0.95

3 11 1.6 1.2e+02 4.1 0.9 1 23 354 376 354 376 0.96

4 11 0.004 0.32 12.2 2.8 1 14 380 393 380 404 0.79

5 11 9.2 7.3e+02 1.7 0.0 2 21 455 474 454 475 0.82

6 11 0.02 1.6 10.1 0.1 3 23 483 504 482 504 0.92

7 11 1.6e-05 0.0013 19.8 2.3 1 23 508 531 508 531 0.94

8 11 0.00087 0.069 14.3 0.2 3 23 556 576 555 576 0.97

9 11 3.7e-06 0.0003 21.8 0.1 1 23 582 604 582 604 0.98

10 11 7.6e-05 0.006 17.7 1.3 1 23 610 632 610 632 0.98

11 11 0.00014 0.011 16.8 0.4 1 23 638 661 638 661 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00019	0.015	16.4	2.0	2	23	299	321	298	321	0.95
2	11	0.013	1	10.7	6.5	1	23	327	349	327	350	0.95
3	11	1.6	1.2e+02	4.1	0.9	1	23	354	376	354	376	0.96
4	11	0.004	0.32	12.2	2.8	1	14	380	393	380	404	0.79
5	11	9.2	7.3e+02	1.7	0.0	2	21	455	474	454	475	0.82
6	11	0.02	1.6	10.1	0.1	3	23	483	504	482	504	0.92
7	11	1.6e-05	0.0013	19.8	2.3	1	23	508	531	508	531	0.94
8	11	0.00087	0.069	14.3	0.2	3	23	556	576	555	576	0.97
9	11	3.7e-06	0.0003	21.8	0.1	1	23	582	604	582	604	0.98
10	11	7.6e-05	0.006	17.7	1.3	1	23	610	632	610	632	0.98
11	11	0.00014	0.011	16.8	0.4	1	23	638	661	638	661	0.97

Sequence Information

Coding Sequence: ATGTGGCGTGTCTCAGAAAGTATGGAATTTCCACCGAAAGATGAGGTGAAAAGCGAATTGTTTCCGTGCCGAGGGTGTCTTGGAGATGGGCAGATGTATAACATGCAGCAGTATGGATTGGCGGAACCCTACAAACAGCTTGTCGGTGTTGAGGTGAGGGTCCCGAGTCTATTACCACAGCATCTATGTCACATATGCCGTGCATTCCTGATCAAGTTCTCAGTGTTCCGAGAAAGATGCAGACGAACCGAGTTGTTGCTGCAGAGTCTGGCTATTGTGAATCCAGTGataaCGACTGAAGATATATCCAGTATAGACAGATTCACCCAGAGATTAGCACCGGTGTATGTACAAACGCAACCCTATATCATTAGTGTAACTGATGCAGTGGAGCAGAACGAAGAGAAACAAGAATGTGACGTTGAACAAAACAGTAATATCAGCTTCGATGACTTCAAAAACGATTTAATCCCAGCGGTAGAAGATGATGATCAAAAAGCAGATGTGGATTTCTTCCAAACGGACGACTTCGATCTAGAAGATATCAAATTGAGCGATCTGAAACGTGAGAAAACGTTAAAAAAGAGCAAGAGGTTGatgaaaaagaacaaaaaagaaatggaaataaaaatcattgaGAAGAAGAGAAAAGTCAAACGAGAAGTTAAGGAGGAGAGTTTGGTGGAGATCGAAATAGACACGGCAGAAGTAGAGGAGAAAGCGAGAGTTAGACGCAAGACGAAACCGCgcgttaataatttatactccGATCCTGAGGATAGGGAGAAGTTTTCTCAGAAGTATGATGTGGACATTATAGTGATGACGAAGGAGGACGAAATGAACGATATGCTGGAGAGGAAGAACAGCCCCAAATACCTTCGAGCCCATAATAAATGCGAGGAGTGTTACAAAGGCTTTATCCATGAGGATACATTGAAACGGCATATTAAAGACAAACATGATCCTAGCTTGGAACACGTGTGCGAATTCTGCCGTTTCCGTTTCAGCAAACGTGTGAACCTAACAGGACATTATCGGAGACACCacaagtacaaatatatatgcaGAGTTTGCACCATCGTCACGCGGATGCGTGAACACGCGGTCCAACACTCCAAGATGCACACGCAGAAGTTCGAGTGTAAATATTGCGGGAAGACATTCAATACAAAAGGGACGACGTACCACGCGCATGTTCGGAGCAAGCACAGTTCTGAGTTACCCTGGTGCAGGATATGCGGGGACGCATTCGTCTGTACCAAGACTCACATGGAGAGGCTTCACAAACAGgctgatatgatAATCGTGTATCCAACATCTAAATGTCACCTCCAGGCTTTGGATCCGGCTCCCGAGCTACAATGCCCGCGGTGCAAGGTTCAGTTCTTGAACGCGGCAGCAGTGTTCGCACACGGACGCACTGGTTGCGGCGCTCTGGCGGCGTGCTTACACTGCGGTCTCGGCTTCGAAGTCGAGTCCGACCTGCGGGAACACGTGCTAGCTCTTCACAAGATACAGTACCCTTGCGACAAGTGTAATAAGGTGTTCAGCCACGAGAGTAAGCTGAATAACCACACTCTGGAGAAGCACTGTGAGGTGGAAACCGGTCCGGAGGGACAGCGCTCCGCCCGGAAGCGCTACATGAAAGTAGTTCCTGCGATGTGCGACATCTGCGGCAAGATTATCGCGGATCAGTACCACATGGTGTACCACCAGCGTATTCACACGGGGGAGAAGCCGTACGCGTGCGCCGACTGCCCCAAACGCTTCAGGATGCCGGAACAGCTCCAAAACCACGTTCGGATCCACACTGGTGAGCGTCCGTTCAAATGCAAGTACTGCCCGAGCTCGTTCAAGACGTACCCCGCGCTCAGCCGCCACCGCCTCGTGCACACCGGCGAGCGCCGCTACCCCTGCCCCGTCTGCAGGAAGCACTTCGCCACCACCGCCGAGATGAAGACCCATCTCGCCACTGTCCACATGAAGATACCCAAACCGCCCCGTAACAGGAGGAGGAACAAACAGACGTTACCGTAA
Protein Sequence: MWRVSESMEFPPKDEVKSELFPCRGCLGDGQMYNMQQYGLAEPYKQLVGVEVRVPSLLPQHLCHICRAFLIKFSVFRERCRRTELLLQSLAIVNPVITTEDISSIDRFTQRLAPVYVQTQPYIISVTDAVEQNEEKQECDVEQNSNISFDDFKNDLIPAVEDDDQKADVDFFQTDDFDLEDIKLSDLKREKTLKKSKRLMKKNKKEMEIKIIEKKRKVKREVKEESLVEIEIDTAEVEEKARVRRKTKPRVNNLYSDPEDREKFSQKYDVDIIVMTKEDEMNDMLERKNSPKYLRAHNKCEECYKGFIHEDTLKRHIKDKHDPSLEHVCEFCRFRFSKRVNLTGHYRRHHKYKYICRVCTIVTRMREHAVQHSKMHTQKFECKYCGKTFNTKGTTYHAHVRSKHSSELPWCRICGDAFVCTKTHMERLHKQADMIIVYPTSKCHLQALDPAPELQCPRCKVQFLNAAAVFAHGRTGCGALAACLHCGLGFEVESDLREHVLALHKIQYPCDKCNKVFSHESKLNNHTLEKHCEVETGPEGQRSARKRYMKVVPAMCDICGKIIADQYHMVYHQRIHTGEKPYACADCPKRFRMPEQLQNHVRIHTGERPFKCKYCPSSFKTYPALSRHRLVHTGERRYPCPVCRKHFATTAEMKTHLATVHMKIPKPPRNRRRNKQTLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01316716;
90% Identity: iTF_01317636;
80% Identity: -