Amun022747.1
Basic Information
- Insect
- Anorthoa munda
- Gene Symbol
- znf711
- Assembly
- GCA_945859655.1
- Location
- CAMAOM010000384.1:106142-107572[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.31 1.3e+04 -2.4 0.1 22 30 160 168 147 171 0.66 2 6 3.3e-06 0.13 13.5 0.4 8 49 173 215 167 218 0.87 3 6 0.00067 27 6.1 0.1 21 44 247 270 239 277 0.86 4 6 2.6e-05 1 10.6 0.2 22 46 304 328 300 334 0.88 5 6 0.097 3.9e+03 -0.8 0.0 30 53 340 363 333 364 0.76 6 6 5e-05 2 9.7 0.4 7 50 370 413 365 415 0.87
Sequence Information
- Coding Sequence
- ATGGCTACAAAACTGTGTAGATTGTGTTGTCAGAGTGAAGGCACGTCTTACATTTTTAGCAAAGAAATTGATGAAATTGCAATAAGTGCAAAAATAATGTATTGTTGTTCAAATATAAATATTAAAGACGAGGATGGACTTCCCTTGTATATTTGTGAAACCTGCCTACAAGAGCTCGCAACCTGCTATCAATTTGTACTAAAATGCGAAGCTACTGATAAGAAATTAAGATCTCAAGCTTTCGAAGTAATTACCCAAGCTATTCCAGATTTCAATGACTGCTCGCCGAAAATTGAAGTAAAACTTGAATTAGACTGTAACAGCAAAGATGGTCACCTTTACGAAGATTTAGAAAATGATGATATTGCTTTTGAACAAGTAAGGCGAGGTAATCTCGAAATAAAATTGGAAAAAGTAGATTCCAAAGTATCACCTAAACGAAAACTATCCAAACAAAGAGCTAAATGCAAAGGTCTGGAAAAAATATGTACTTGCTCAGTTTGTGGCCGAACATGTGCTAACCCATCCACCTTTAAGGCTCACATGAGATCCCATACTAATGAGAAACCATACCCTTGTCCTTTATGTGATAAGAAATACAAAGACAATGGCACCCTCAAACGACACATGGACAGAAACCATGTCCAACAGAAGCGGCAGCGGAACTTTATTTGTGAAAACTGTGGCAAAAGCTTCTACTCTAAGAATGATGTGAAAGTTCATATGCGTACTCACACGGGGGAAACACCATATAGTTGCTCCATATGCACCCTCAGATTCACACAGACCAGTGCTTTGCAAAGACATAAAAAGCGACACACTGGTGAGAAGGAACACTTGTGCACGGCTTGTCCAAAAAGGTTCTGTACTAAGGCAGAACTAAAAAGTCACCTCTTGGCACACAGTACTGAAAAAAAGTACTCTTGTCCTCTCTGTAATGTATTATTTAAGTATCAAAGCAATTTGAGGAAACATGTGAGACTGCACTCTGAACCAAATAGATTTGTGTGCAACCACTGTGGACGTACATTCAATGTTAAAGGGAACCTGAAGAGCCACATTGACAAGCAACATTCTGAGAAATCTGGTCACTGTACTGTTTGTTCTAAACATGTTGCAAATATGGAGGTTCACATGTGGAGACATACAGGACAAAGGCCATTGAAGTGTGAGCTCTGTACAAGTACCTTTTATGAAATGAAATCTTTGGCTCGCCACATGAACTATAGACATAAGGCAACTGATAGATTTAAGTGTACAGCTAAAGAATGCTTGATGACATTCCCATCAAAGCCAATGCTCGACTTCCATACTGCTAAGCTTCATAGTACCCACATCCCATTTCCATGTGATAGATGCACCAGAGCATTTTACAGGAAGAATGATCTTGCCAGGCATAAAATTGCCACTCATAAAGAAAGACTCACTTAA
- Protein Sequence
- MATKLCRLCCQSEGTSYIFSKEIDEIAISAKIMYCCSNINIKDEDGLPLYICETCLQELATCYQFVLKCEATDKKLRSQAFEVITQAIPDFNDCSPKIEVKLELDCNSKDGHLYEDLENDDIAFEQVRRGNLEIKLEKVDSKVSPKRKLSKQRAKCKGLEKICTCSVCGRTCANPSTFKAHMRSHTNEKPYPCPLCDKKYKDNGTLKRHMDRNHVQQKRQRNFICENCGKSFYSKNDVKVHMRTHTGETPYSCSICTLRFTQTSALQRHKKRHTGEKEHLCTACPKRFCTKAELKSHLLAHSTEKKYSCPLCNVLFKYQSNLRKHVRLHSEPNRFVCNHCGRTFNVKGNLKSHIDKQHSEKSGHCTVCSKHVANMEVHMWRHTGQRPLKCELCTSTFYEMKSLARHMNYRHKATDRFKCTAKECLMTFPSKPMLDFHTAKLHSTHIPFPCDRCTRAFYRKNDLARHKIATHKERLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01118608;
- 90% Identity
- iTF_01119616;
- 80% Identity
- iTF_00111901;