Basic Information

Insect: Anorthoa munda
Gene Symbol: ham
Assembly: GCA_945859655.1
Location: CAMAOM010000154.1:2198737-2239680[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0036 0.43 12.2 0.0 2 23 253 275 252 275 0.96

2 9 0.00094 0.11 14.1 0.8 1 23 282 305 282 305 0.93

3 9 2e-08 2.4e-06 28.8 0.1 1 23 311 334 311 334 0.96

4 9 1.7e-06 0.0002 22.7 1.7 1 23 340 362 340 362 0.95

5 9 6.1e-05 0.0072 17.8 6.1 1 23 368 390 368 390 0.99

6 9 0.00012 0.015 16.9 0.4 2 21 398 417 397 418 0.94

7 9 1.5e-08 1.7e-06 29.2 0.7 1 23 813 835 813 835 0.98

8 9 5.2e-07 6.2e-05 24.3 1.7 1 23 841 864 841 864 0.97

9 9 2e-05 0.0023 19.4 3.2 1 23 870 892 870 892 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0036	0.43	12.2	0.0	2	23	253	275	252	275	0.96
2	9	0.00094	0.11	14.1	0.8	1	23	282	305	282	305	0.93
3	9	2e-08	2.4e-06	28.8	0.1	1	23	311	334	311	334	0.96
4	9	1.7e-06	0.0002	22.7	1.7	1	23	340	362	340	362	0.95
5	9	6.1e-05	0.0072	17.8	6.1	1	23	368	390	368	390	0.99
6	9	0.00012	0.015	16.9	0.4	2	21	398	417	397	418	0.94
7	9	1.5e-08	1.7e-06	29.2	0.7	1	23	813	835	813	835	0.98
8	9	5.2e-07	6.2e-05	24.3	1.7	1	23	841	864	841	864	0.97
9	9	2e-05	0.0023	19.4	3.2	1	23	870	892	870	892	0.98

Sequence Information

Coding Sequence: ATGCTGAATTTTGATACGAGTTACAGAATGAAGATGTCTGCGGCAGACAGCCAAGAGTCTGGCAGTCCCCCGCCGAGCCCGACTGACTCTGCAACATCAGAATCAGCGCCCACCTTAGTTCACATCAAACAAGAAAACATGCCTCCAGGAACAGACGTAAAAGAGTACTACGGTACTCTAGACTTTGGTCTCTCTGACACTTATCTAGCCAATAACTTCTCCGACTATGGAAGAGGATATTTACCTAGACCTCTAGACCACCTAAAATCGGTCAAAAACGAAGAAGGGACGAAAGATGATGATCCCGGGGATAGAGATTTTATCCTACCTAGTGAATTGATGTTTAAAAGTGGAGGTATATTTGCTAGAGCAAATATTTCTAATGGAACGCAATATGGGCCTTTTCTGGGAGTGTTGGAGAGTCAGCCGAAGGATAGGCGGTTTGCTTGGGAGGTCCGTGACAAGAGTGGTGTCAGTGGCTGGTTAGATGCCACCTCGGAAAAGGAAAACTGGCTCAAACTGGTGCGCTCCACCAACTACCCCCACGATGTCAACGTACAACACCTCTTGTTGGCTGGCCAGGTGTGGTACAAGGTTGTCCGTGAAGTGCCCTCTGGCCAGGAGTTGCTGCTGGGTCCTCGGACACCCATCTTCTTGGAAGACGTGCTCTCTTTGGAAGCAAAGCGTCAGTCATCTATTGAGAAGTTCAGTTCTCTGGCGTCAGCTGACGACGAGGAGAGGGAGGACGCTGACATCCGCTGCAGCTACTGCGATCAACCCTTCCCTAACATCGATGTTCTCGATCGTCACTTGATAACGGAGCACGCTCAGCCGGCCGCTGCATTTCACTGCGAACTCTGTAACAGGGCTTACAGCACTCGGGTATTGCTCCTACGACACCGTGCGCTTGCGCATACTGACATCAGAAAATACCCCTGCGAAAACTGTCCTAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATTCGCGCGCAGCACGCGGGCGCCCGCAGCCACGCCTGTCCCGAATGCGGGAAGACCTTCGCGACCTCCTCGGGCCTGAAGCAGCACACGCACATACACTCCAGTGTCAAGCCCTTCCAGTGCAAGGTCTGCTTTAAGGCTTACACCCAGTTCTCCAATCTGTGCCGTCACAAGCGGATGCACGTCGCTTGCCGAGCTCTGGTTGAATGCGGAAAATGCGGCCAGTCCTTCACGTCTTACGCCTCTCTTACTAAGCACAAGAGATTCTGTGACACCGCAGCCGCCGCTTCTGTCAACCTCCGAGGACAAATGCCCCAGGGTTTACCGCAAATACCATCGCTTCAAAACGTCGGGATGAATAACCCTAACAACACCAATCCGTTCCCGATGTACAGGGGACCCACTCTGCCCCTACCATACAATACATTTGCTCACTACCCGGCGCTCTTCTCTGCTGCTGCTGCTGCAGCTTGCCCACCCGAGTTCCTCAGCCCACTACTCTTCAACGTACAAGGTGCAAGACTCGCTATGGAACATGACATGGCTATGTCAAATGCCAATTTGGTATCCAAGCAGCAAGAAGGCCGTCTATCGGTAAAAAGCATGGACAGCTCAAACTCCTTAGATGATAACAAGAAGCCCAAGGATTTGGATTTCGAAAACAAAAGAGACAGCTACAGTTCAGATAGGGCTACGCCCAACAAATCGCATAGTCTTTATTCTAAGCAATCGCCTCCTTCTGGAGAGGAAGCATCGTCTCAACGCCGACCGTCACCAGTGATGCCACTGCCTACACCGATTACTCCATTCAGTTTCGCAAGAGAAGAAATGAAACGGAGGTCTCCGTTCAACTTCAAACTCAATAATAATGATATTCAGGGTAACAAGTGTCTGTCACCATTACCTAAAGACTTGTCCAAAAATGTCATCGAAGACGATAAAACTTCTGATTATTCTGATGTTGAAGAAGATACGAAGAAAGATGAGGGTGATCAGCCTTTGGATCTATCGGTATCAAGGAAACATAATGATAAGGATTCTGAAGCTGAAAATGATGATCGTTCCTTTCGCAACTCAGTTAAGTCATATTCACCTCCTGAAAGCCCAGCTGAGAGGAGCAAGACTCCTGAAAATGACACGACAGACGTTGATGTCGAAGGTGTAGAACCTAAGAGGGAGGAATCGCCACCGCAGCTAGTATCACCACCCTTGGCGTTCCCCATGCCCGTTCACCCGCAGCACAGCAACTTAATCGAAGCTATGTACCGGCCTCGATTCCCATCTTTCCACCCTTCCGAATCGCTCCTGAACTCGTCGCACTCTCCGTACGTTCCGAGTCCGTTCAATTTTTTATCCCCACTTCTCGGTACTGATGGACCCGATAGGCAAACAAGCGCCTATGCTAAGTTTCAAGAGCTTAGTTCAGGATCAGGAAAGTTGCGTGACAGGTATGCTTGCAAGTTCTGCGGCAAAGTGTTCCCGCGGAGTGCGAACCTGACTCGTCACCTACGTACCCACACTGGCGAGCAGCCTTACAAGTGCAAGTACTGCGAGCGCTCGTTCTCGATCTCGTCGAACCTGCAGCGGCACGTGAGGAATATTCACAACAAGGAGCGGCCATTTCGGTGTCCCTTGTGCGAGAGATGTTTCGGGCAGCAGACGAATCTCGATCGACACTTGAAGAAACACGAGGCAGAGGGGGGAGATTCTCCTAGTTCTGCGGATACTGAGAGGGAGGATGCGTATTTTGATGATATTCGGTCGTTCATGGGGAAGGTGACGTGTTCCCCGGGGACCCGCTCTCCGGCGGCGACGCCTCCGCACGGAGCGCACGGCGCGCACGGAGCACACGGGGCGCACGCCGCCCACGGCCCACGCCCCTCGCTGGCTATCTCCACATAG
Protein Sequence: MLNFDTSYRMKMSAADSQESGSPPPSPTDSATSESAPTLVHIKQENMPPGTDVKEYYGTLDFGLSDTYLANNFSDYGRGYLPRPLDHLKSVKNEEGTKDDDPGDRDFILPSELMFKSGGIFARANISNGTQYGPFLGVLESQPKDRRFAWEVRDKSGVSGWLDATSEKENWLKLVRSTNYPHDVNVQHLLLAGQVWYKVVREVPSGQELLLGPRTPIFLEDVLSLEAKRQSSIEKFSSLASADDEEREDADIRCSYCDQPFPNIDVLDRHLITEHAQPAAAFHCELCNRAYSTRVLLLRHRALAHTDIRKYPCENCPKVFTDPSNLQRHIRAQHAGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKAYTQFSNLCRHKRMHVACRALVECGKCGQSFTSYASLTKHKRFCDTAAAASVNLRGQMPQGLPQIPSLQNVGMNNPNNTNPFPMYRGPTLPLPYNTFAHYPALFSAAAAAACPPEFLSPLLFNVQGARLAMEHDMAMSNANLVSKQQEGRLSVKSMDSSNSLDDNKKPKDLDFENKRDSYSSDRATPNKSHSLYSKQSPPSGEEASSQRRPSPVMPLPTPITPFSFAREEMKRRSPFNFKLNNNDIQGNKCLSPLPKDLSKNVIEDDKTSDYSDVEEDTKKDEGDQPLDLSVSRKHNDKDSEAENDDRSFRNSVKSYSPPESPAERSKTPENDTTDVDVEGVEPKREESPPQLVSPPLAFPMPVHPQHSNLIEAMYRPRFPSFHPSESLLNSSHSPYVPSPFNFLSPLLGTDGPDRQTSAYAKFQELSSGSGKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPLCERCFGQQTNLDRHLKKHEAEGGDSPSSADTEREDAYFDDIRSFMGKVTCSPGTRSPAATPPHGAHGAHGAHGAHAAHGPRPSLAIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00441779;
90% Identity: iTF_00177403;
80% Identity: -