Amun036308.1
Basic Information
- Insect
- Anorthoa munda
- Gene Symbol
- -
- Assembly
- GCA_945859655.1
- Location
- CAMAOM010001217.1:173676-175977[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-08 8.3e-06 26.6 0.0 1 43 18 60 18 62 0.89 2 2 7.3 4.2e+03 -1.3 0.0 14 23 142 150 135 152 0.70
Sequence Information
- Coding Sequence
- ATGCCTCGCAAATACATTAGAAAGGTTGGAGTTCGACCACGAGCTGAATGGACGCAAGAGGCATTAATAGCTGCAATGGATGAAATTTCGAGAGGCATTCTTGGTATCAACGAAATATCTCGTAGATATGGGATTCCATCGAGAACATTAAGGAGAAGATTCGCAAACAAAAATACTGAAAAACAAACATTAGGAAAACATCCACTTCTTGATTTTGTAAACGAAAAACGATTGGTGAGCCACATACAGAAATTAGAAAAAGCTGGTTTCCCTCCAACCCGGGACATGATTCGAAGATTGGCATTCGAGTTTGCTGAAAAATTGGGTAAAGAAACCAATTTTAATAAGGAGAGTCGAAAAGCTGGGCCACATTGGTTAAGATCATTTTTAGAACGTAATACTGAGTTAAGTATTCGTCAGGCAGAAGGCTTATCAGTTGCAAGAGCACAGGGATTAAATCGAGATGAAATTAACAAAATGTTTGAACTACTGCTTAAAGTAATGACAGAGCATGACTTACTGGATAAACCGGATAGGATTTACAATATAGATGAGACAGGTGTCCAGTTAAATAACGCTACTGGAAAAGTTATTGCTACAAGAGGCGCCAGAGTAGTCCATTCGATAACTTCTGGTGAGAAAGGTGAAACTCTATCAGTAATAGCGTGCTGTAATGCTGTAGGGAACTTTCTTCCCCCAGTAGTCATCATCAAAGGAGTAAACAAGAAACTAGAATTTCAGGATGGTCTCCCACCCGGATCAGAAGTCTATATGAATAGAAAATCCGCGTACGTGAATGCTGAATTATTTCACAAGTGGCTCAAAGAACATTTTATACCCAGAAAACCAGTAGGAAAGATTATTTTGCTTCTGGATGTTCCAGAGAGCTTTTTTGCAATATCTGACATTTCTTTGAGTAATCAAAGACCTGCAGAAGACAATGCAGTTGAAAATAATGCTCCAGAACAGGAACAAGTTTCATCTAATAGATCAACTCCTGTAGATGATCGAGTCCTTTCTAACATTACTCCTAATTATTTGGATATTTTTTATAGAAATGAAGAAGCTCTTGAGCAGGAACCAGGTCCATCTAATGTACAAAGTCTGGGAGTCGGCCTAAATCTATCCAACATTTCTCCTTGTAATACGGATCAACCAGATAGGAGATTTTCTAATTCAAGCCCATCGATTCTTTCACAGAATAATAACATTATCAACATTGAGGAACTAGAAACACCAAGCAAATATTTGCAAGAATGTTCGCCGGTGCCAATTGTTCCGGTTCCATTTCATAAAAGGGGCAAACAATCAGCTGCAATTTTAAATACAAAAGAAAATATTGAAGTGAAGAAATCTAAAGTTAAAGGTAAAGCTACTCCAGGAATACGTTGTAAAAATAAATGTCGACCAGCTAAAGCTGATGTACAGAAAAAAGTGTTAAGACCTGTAGTAAAGTTTCCAAGAAAGGTTCCAGCCAAATGTAGTAAGAAAAGAAAAGACATTGAATCAAGTGATGAAATGACAATCTCGGATATTTCTAATGAAACTGATTCAGACATCGATCAGGGGAGACCAGGTGAAACTGATCTGCATAAAAAAAATCGAAGATCTCAAGCTAAGATTCAGAGTAAAGTTCCAGCAAAAAATATTAAGAAAAGACGAATAGAACACAAGGAATCAAGTGATGAAATGTCGATCTCAAATAATTCGGATGAATCCGAGTCAGACGCATACAATGATTCGGAATGCAAAGAATGCTTTGAAGAATATAAAAAGACCAAATCAACTGCAGATTGGATACAATGTGTAATGTGTAAAAAATGGCTACATGAGAATTGTACCATGTACGGCGACTATTGCAATGAATGCGGTAGGATTAAACGAATGAAAAAAAACAAAGTGAAGAAGTGA
- Protein Sequence
- MPRKYIRKVGVRPRAEWTQEALIAAMDEISRGILGINEISRRYGIPSRTLRRRFANKNTEKQTLGKHPLLDFVNEKRLVSHIQKLEKAGFPPTRDMIRRLAFEFAEKLGKETNFNKESRKAGPHWLRSFLERNTELSIRQAEGLSVARAQGLNRDEINKMFELLLKVMTEHDLLDKPDRIYNIDETGVQLNNATGKVIATRGARVVHSITSGEKGETLSVIACCNAVGNFLPPVVIIKGVNKKLEFQDGLPPGSEVYMNRKSAYVNAELFHKWLKEHFIPRKPVGKIILLLDVPESFFAISDISLSNQRPAEDNAVENNAPEQEQVSSNRSTPVDDRVLSNITPNYLDIFYRNEEALEQEPGPSNVQSLGVGLNLSNISPCNTDQPDRRFSNSSPSILSQNNNIINIEELETPSKYLQECSPVPIVPVPFHKRGKQSAAILNTKENIEVKKSKVKGKATPGIRCKNKCRPAKADVQKKVLRPVVKFPRKVPAKCSKKRKDIESSDEMTISDISNETDSDIDQGRPGETDLHKKNRRSQAKIQSKVPAKNIKKRRIEHKESSDEMSISNNSDESESDAYNDSECKECFEEYKKTKSTADWIQCVMCKKWLHENCTMYGDYCNECGRIKRMKKNKVKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01264393;
- 90% Identity
- iTF_00111587;
- 80% Identity
- iTF_00111587;