Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: -
Assembly: GCA_000390285.2
Location: NW:592946-612671[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.9e-05 0.0015 18.6 0.7 1 23 143 165 143 165 0.95

2 15 0.0022 0.067 13.4 1.2 3 23 173 193 172 193 0.99

3 15 0.00044 0.013 15.6 0.4 1 23 298 320 298 320 0.98

4 15 0.04 1.2 9.4 0.2 1 23 327 350 327 350 0.94

5 15 1.5e-06 4.5e-05 23.4 3.9 1 23 374 396 374 396 0.98

6 15 0.02 0.61 10.4 0.0 1 23 409 431 409 431 0.94

7 15 1.8 55 4.2 0.0 1 23 437 460 437 460 0.88

8 15 0.1 3.2 8.1 1.9 2 19 468 485 468 486 0.96

9 15 0.00042 0.013 15.7 3.6 1 23 495 517 495 517 0.97

10 15 0.0073 0.22 11.7 0.3 2 23 523 544 522 544 0.97

11 15 1.6e-05 0.00048 20.1 0.4 1 23 552 574 552 574 0.98

12 15 0.0068 0.21 11.8 0.2 3 23 582 602 580 602 0.97

13 15 0.00022 0.0067 16.5 0.3 1 23 608 630 608 631 0.95

14 15 0.13 4 7.8 1.8 1 23 645 667 645 667 0.96

15 15 0.00075 0.023 14.9 0.1 1 20 1025 1044 1025 1047 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.9e-05	0.0015	18.6	0.7	1	23	143	165	143	165	0.95
2	15	0.0022	0.067	13.4	1.2	3	23	173	193	172	193	0.99
3	15	0.00044	0.013	15.6	0.4	1	23	298	320	298	320	0.98
4	15	0.04	1.2	9.4	0.2	1	23	327	350	327	350	0.94
5	15	1.5e-06	4.5e-05	23.4	3.9	1	23	374	396	374	396	0.98
6	15	0.02	0.61	10.4	0.0	1	23	409	431	409	431	0.94
7	15	1.8	55	4.2	0.0	1	23	437	460	437	460	0.88
8	15	0.1	3.2	8.1	1.9	2	19	468	485	468	486	0.96
9	15	0.00042	0.013	15.7	3.6	1	23	495	517	495	517	0.97
10	15	0.0073	0.22	11.7	0.3	2	23	523	544	522	544	0.97
11	15	1.6e-05	0.00048	20.1	0.4	1	23	552	574	552	574	0.98
12	15	0.0068	0.21	11.8	0.2	3	23	582	602	580	602	0.97
13	15	0.00022	0.0067	16.5	0.3	1	23	608	630	608	631	0.95
14	15	0.13	4	7.8	1.8	1	23	645	667	645	667	0.96
15	15	0.00075	0.023	14.9	0.1	1	20	1025	1044	1025	1047	0.94

Sequence Information

Coding Sequence: ATGGAGGAGTCTTTCGGGTTAACATGGGAGGACTCCACGACTGTTGTTCAGGCGGAGGAGGTGATCTGCGGCATTGAGAACGAGATCCTCCCGGCAGAAACAGAAGAATTTACTGGCGTCTCTGAGGGAGTAACAGAAGAGGTCGTACAGGAAACACCCGAGAATGGACAGGGTGATGTACCGGTGGAAAGAATTATGTATCTCACAGATGGAAATGTGCTAGTCATGCAGGAGACTGCCGAACCCGAGTACCAGGAACAGCTGATGGTTTCAGAGGAGATTATTACAGAACAGTGGGGAGAGAGCTGCCCAGAAGAAATAGTGGTGGGTTCAGAGGAAGCCGTTGGCGGCACGGAGGAACAATCTCAGGAGGACTGTGACATTCCCCTGCCCACCGACCAAGATGAGTACACGGCTGCCAGACCATACCCCTGCGACTTTTGCAGTCGTCGGTTCCGAAAGAAAGCCAACCTGATGAACCACATGGTGGCTCATCAGACAGATAGGCCTCACGGTTGTAATCTGTGTGGGGTACGTTACATTAGGAAATGTGATCTGATGAACCACCTCAAGATCCACGCCTACATACCTGAGGCCGACGGGCTAGAGGAGGAAGATATGCAGGCCTTGGAGGATTCCTCTGATGCCGAGAAGGCCAGGAAGAGGGGGAAGGCCCCACAGAAGAGGCGGAGGAAGAATAAGGTGAAGGAGGAATATGATTCATTTGAAGGAGACGACACagTCGCTTCCAGTTCCCGTTCTTACAACTACGTAGATGAAGACATGAAATTGATGGAGCAGATGGAGAATAATAGCAAAGCCGAATACACCGAGTACATCCCCGAGGAGCAGACCGAAATGAGGTACCCTGTAACGGATCCGAGGAAACCCTTCGTCTGCCAGCACTGTGGCATTGGTTTTGCTCGAGAGAAGGCCATGCTTTCACACACCCGAGTCCATGCCGAGGGCGACAGTCCTTTCGAGTGCCAGAAGTGCGGCGAGATGTTTTGGGACCCTGTTCAGATGCGTGAACATGCCAAGCAGAAGCACGGGGACGTGGAGGACTTTGATGATGATGAGGACGAGGACTATTCGGAGGAGGAAACCAAATATGGAACATTCTACTGCACGACCTGCGGCCTGTCCTTTCACCGGCAGGACAATCTGAGACGCCACCAGCGTGTCCATATCAAGGAGGAGTTTGTGAACGAACACGAGTTTGGCCATATATGCAACGTCTGCGGAGAATCCTTCCAGGAGGCTCTCGATTTGTTGGCCCACGCAGAGGTGCATGCTAGGGGAACGGAGCATCGGTGCATGATTTGCGGGGAGAGCGGAGCCGATGAAAATGCTGTCGCTGTCCATGTTCAGGCAAAGCATGGCAAGAGCCTGCCGCCCAACACCTGCATGCTGTGCGGCCGGACGTGCAAGGACCGTCGCACCCTCCTGAAACACTCCTGGGAGCACTCGAAGGAGAAGATGTTTGCGTGCAGCAAGTGCGCCAAGACCTTCCACAACAAGGCTAGGCTGAAAAGGCACATGCTTTCGCACAGGAACAAAGTGGTGACCTGCGATGTGTGCGGAGAGGATTTCCCCGACGGAAGGTCGCTCATGAATCACCGGCACAGCCACAGTAGCGTCTCGGGCAGGCAGTTCCCCTGCAGGGAATGTGGCAAGACGTTTGGATCGAGAAGCTCGCAGCAGATTCACATAAGGATTCATACGGGCGAGAGGCCTTATGGCTGTCGATTCTGCTGGAAAGCATTCGCGGACGGCGGCACGTTGCGCAAGCACGAGCGCATCCACACCGGCGAGAAGCCTTACGCTTGCGCCGTCTGCCCCCGAGCATTCAATCAACGGGTGGTCCTAAGAGAACACATCCGCTCTCACCACTCGGGCCCCGACCCTAAATATACCCACAGCATGACGCCTTACTGCTGCTCCGTCTGCTCAGACATGTTCGCTACGTCCCAGGACCTCATCCTGCATCTAATCCATCACTGCGACATGAACACCGCCATGAAACGGCAGCCCCAGGTGGGCCCCAGGAAGTACAAACGGAGGAGGAAGCTGAAGCCGCACGAGCTTGAGCTGATTTCAAACCGCATAGAGGAAGACGACAACGATAATATGGACGGCATGGAGGAGACTTTCACGGAGAGCGACGAGGAACGTGACAGGAGGAAGAGGACTCCGAGACGGCCAGCTAAAAGGCCTCCCCCTGCTCCCGTCTCGCCCAAGGATCCGCTGACAGAGACCTACACCGACTTGTACAACAGTTGCTCCTCCGCCATCGAAAACATCAACTCGATAGTCAATTCCAAGACGACTCCCACTAAGGCGAAACCCAAGAAGTCAAAGGCGGACCAAGCGATGCCTTCCAGACCCAAGATGATTCACACGCAAAAGACGAGGGTAGCGGTGGAAACAGGGGAAGACGGTAGGGTGAGGCACAAAACTAAGACGTTGATCACAAGGACGCAGCCTGCTGAAATTAAGTCTGCCACAGgAGAGAGAATAAGGCCCAGAACGAAAAACGTCAGCTACCACGTCCTGCAGACCGAGAAATTACCGCTGGCCACTTTCCCCGAGCCTGACAAGGACGCCCAGCAGGCCGTCGAGAACCTACTGAAGGTGGAGCAACCCACAGAGGAAGCCAACCTGGCCGAGCACAGCAACGGGGTAATATACATGGACCAGGTGGAGCAACCACCCGACGTGGCCGCCGAGCAGACCGTGGAGAGCGAAGAACCCGTGCCTGTCAGTATCGTAGAGATTAAGAAGCGGACGAGGAGCTCCAGCAACAGTCTCAAACCCGGCCGCCACATAATCGGTCCCGGAAGCAAGGTGAGGCTAGTGAAGGAGGGTATGATCGTCTCCAAGGTGAAGAGCAACAAGAAATCAGACGAGAGCGAGGTAGAATCGATCCTCCCTGACGTGACTAGCACTCCGTTAACTATTAAGGAGGAGATAATACAGCACTCAATCAAGCAGGAGATAATGGATCCCAGTCCGCTGCACGAGCTGGCAGAGATTTCGATGCAACACGCCAACGCTACAGCGAAGAGTCTCTTTAAGTGCGAGATGTGCAGCGAGGTGTTCTCCGACAGGGCCCAGCTGCTGGTGCACGTGCCTATACACATTTGA
Protein Sequence: MEESFGLTWEDSTTVVQAEEVICGIENEILPAETEEFTGVSEGVTEEVVQETPENGQGDVPVERIMYLTDGNVLVMQETAEPEYQEQLMVSEEIITEQWGESCPEEIVVGSEEAVGGTEEQSQEDCDIPLPTDQDEYTAARPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYIRKCDLMNHLKIHAYIPEADGLEEEDMQALEDSSDAEKARKRGKAPQKRRRKNKVKEEYDSFEGDDTVASSSRSYNYVDEDMKLMEQMENNSKAEYTEYIPEEQTEMRYPVTDPRKPFVCQHCGIGFAREKAMLSHTRVHAEGDSPFECQKCGEMFWDPVQMREHAKQKHGDVEDFDDDEDEDYSEEETKYGTFYCTTCGLSFHRQDNLRRHQRVHIKEEFVNEHEFGHICNVCGESFQEALDLLAHAEVHARGTEHRCMICGESGADENAVAVHVQAKHGKSLPPNTCMLCGRTCKDRRTLLKHSWEHSKEKMFACSKCAKTFHNKARLKRHMLSHRNKVVTCDVCGEDFPDGRSLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYTHSMTPYCCSVCSDMFATSQDLILHLIHHCDMNTAMKRQPQVGPRKYKRRRKLKPHELELISNRIEEDDNDNMDGMEETFTESDEERDRRKRTPRRPAKRPPPAPVSPKDPLTETYTDLYNSCSSAIENINSIVNSKTTPTKAKPKKSKADQAMPSRPKMIHTQKTRVAVETGEDGRVRHKTKTLITRTQPAEIKSATGERIRPRTKNVSYHVLQTEKLPLATFPEPDKDAQQAVENLLKVEQPTEEANLAEHSNGVIYMDQVEQPPDVAAEQTVESEEPVPVSIVEIKKRTRSSSNSLKPGRHIIGPGSKVRLVKEGMIVSKVKSNKKSDESEVESILPDVTSTPLTIKEEIIQHSIKQEIMDPSPLHELAEISMQHANATAKSLFKCEMCSEVFSDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01227586; iTF_01370084; iTF_01290627; iTF_01014885; iTF_00886721; iTF_00722323; iTF_00166296; iTF_01310779; iTF_01296733;
90% Identity: iTF_01014885; iTF_01227586;
80% Identity: -