Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: Hr39
Assembly: GCA_000390285.2
Location: NW:229074-318763[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2 1.5e+04 -6.9 9.0 120 184 189 250 104 278 0.38

2 5 0.55 4e+03 -3.4 4.9 52 113 202 264 177 318 0.49

3 5 1.4e-08 9.8e-05 21.6 0.0 1 28 388 415 388 458 0.78

4 5 0.043 3.1e+02 0.2 0.0 85 117 447 479 413 506 0.70

5 5 1.8e-73 1.3e-69 235.3 0.2 205 408 519 717 499 717 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2	1.5e+04	-6.9	9.0	120	184	189	250	104	278	0.38
2	5	0.55	4e+03	-3.4	4.9	52	113	202	264	177	318	0.49
3	5	1.4e-08	9.8e-05	21.6	0.0	1	28	388	415	388	458	0.78
4	5	0.043	3.1e+02	0.2	0.0	85	117	447	479	413	506	0.70
5	5	1.8e-73	1.3e-69	235.3	0.2	205	408	519	717	499	717	0.97

Sequence Information

Coding Sequence: ATGGCCGCAGACATGAGGTCACCCAACGTATCCGTTACTCCAATTAACATGGAGCCTTATCCGCCCCAGGTCCTTTCCAATGGGGACCACCACCCTCCTAGCGAACCCCCACAGAGAACGAGGAGTGCCCCCCACCCAGCCGCCTTGATGACAAATGggTCCACTGATATCCTGGATAGTTCCGATGCCGAAGTTGCCAGAATAGACTTTCAGGCGGTGAATATGAGGTCCAAGAAAAAACGCGACGACATACCGAGGCCCATGAGTTGGGAGGGTGAGCTGTCAGACGGAGAGAGAGATGGTATGTGCGTGGATGAAGGCGTCTCGAGTCAGgtTCCCGAAAACCTGTCGCTATCACAATCCAAGCAATCTTGTACGTCGGACTCGAAAGAGAGTCCAATCCTGCGACTGAAACAACCCCCTATGGGTAACTACTCACTTCACAGTACACCCAGCAATTCCCCACTACTTAGCCAACGTCATCCTGTAACAGGAGTGCCAATCATAAGCCATAAGGATCTCATGCACAAGGCTTTAAACGTTCCTCCGACCCCCAGCCCCGACTCGGCCATCCACTCAGCATACAGCGTCTTCAGCTCCCCAAATCAGAGCCCTTTGACACAACGACACATTACTCTCACGCCAAACCTGAGCAGGAACAACAGCGATGCGTCGCATTCCAGCTGCTGCAGCTACAGCAGCGTGTCGGTCTCTGTATCGCCGACTCAGCAGTTCTCTCCCACTCACAGTCCCATACAGGGACGCCACATGCACAGTATTCACAGCAGCCCCCTACATCACAATATCCTCTACCGTAGCCTCCAGGAGGACCCCACAATCCAGTATGCTACAGAGCACGACGCTCTCGATGAACCCGAAGACAAGGCGGGCCTTCTACACTCGTCACTGCCAGCTCAGCCCGGAATATCGAGGCAGCAACTCATCAACAGCCCCTGTCCGATATGCGGGGACAAGATATCCGGGTTCCACTATGGCATCTTCAGCTGTGAATCGTGCAAAGGCTTTTTCAAGAGGACCGTGCAAAATAGGAAGAATTACGTTTGCCTGCGGGGGGCTCAGTGCCCCGTCACGGTGGCGACTAGGAAGAAATGTCCCGCTTGTCGGTTCGATAAGTGCTTGCAGTGCGGGATGAAACTTGAGGCTATCAGAGAAGACCGAACCCGCGGAGGTCGATCCACGTACCAGTGTTCTTACTCTCTGCCCCCCTCCTTGACTAACCACGCAGAATTAAGGGCCAGTTCGACTGATCTAAGGCAGGGGATGGGTGATACCCACCCCGGCCTTACCGTGAAGCTAGAACCTCCCGATTCGGGAGTTCCTCATCACAAGAGAAATACTCTGCCAGGATCGAAAGGTGTCCCTCCATTATTGCAAGAAATAATGGATGTGGAGCATCTGTGGCATTACAACGAAATGGAACTGAACAAATTGAGCACTGAGGGTCACCTGGGCAAGGAGGGTTCCAGCGGTGCTGTGCACAATCTTTCCACTCACCCGTTACTGGCCGGCACCGCATTGGCTGGGTCCACAGACACGAACCCCGACTTTGTGGCGAACCTCTGCAACATAGCGGACCACAGGCTTTACAAGATCGTGAAGTGGTGCAAAAGTCTTCCGTTATTTAAGAATATATCGATTGACGATCAAATATGTTTGCTCATAAACTCGTGGTGTGAACTCCTCCTCTTTTCGTGCTGTTTCCGATCCATGTCGACCCCGGGAGAGATAAGGGTGTCCCTGGGGAAGAGCATAAACTTGGCGCAGGCCAGAGAAATGGGCATGCAAGCATGTATAGAGAGGATGTTGAACTTCACAGAGCAGCTTAGGAGACTTAGGGTGGACCAGTACGAGTACATAGCCATGAAGGTTATCGTACTGCTTACGTCTGATACTTCGGAACTTAGAGAGGCTGAGAAAGTGCGAATGTCACAAGAGAAAGCTTTGAAGGCTTTACAGGATTATACGTTGTCGCATTATCCCGAGAGTCCTGCCAAATTTGGGGAGCTTCTGCTTCGTATTCCTGAATTACAACGAACCTGCCAGGTCGGAAAAGAGATGCTGACCATAAAATCGAAGGACGGAGACGGACCTAGCTTCAACCTCCTTATGGAGCTCCTGAGGGGGGACCACTGA
Protein Sequence: MAADMRSPNVSVTPINMEPYPPQVLSNGDHHPPSEPPQRTRSAPHPAALMTNGSTDILDSSDAEVARIDFQAVNMRSKKKRDDIPRPMSWEGELSDGERDGMCVDEGVSSQVPENLSLSQSKQSCTSDSKESPILRLKQPPMGNYSLHSTPSNSPLLSQRHPVTGVPIISHKDLMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHSIHSSPLHHNILYRSLQEDPTIQYATEHDALDEPEDKAGLLHSSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAQCPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTNHAELRASSTDLRQGMGDTHPGLTVKLEPPDSGVPHHKRNTLPGSKGVPPLLQEIMDVEHLWHYNEMELNKLSTEGHLGKEGSSGAVHNLSTHPLLAGTALAGSTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSINLAQAREMGMQACIERMLNFTEQLRRLRVDQYEYIAMKVIVLLTSDTSELREAEKVRMSQEKALKALQDYTLSHYPESPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00753059;
90% Identity: iTF_01014531;
80% Identity: iTF_00110593;