Basic Information

Gene Symbol
lilli
Assembly
GCA_000390285.2
Location
NW:218121-306018[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 1.9e-08 0.00028 20.0 0.0 4 69 10 80 8 144 0.79
2 8 1.9e-08 0.00027 20.0 17.1 349 496 236 389 228 419 0.55
3 8 1 1.5e+04 -6.8 15.5 197 483 485 554 426 585 0.47
4 8 1 1.5e+04 -8.0 14.4 422 472 634 681 578 690 0.49
5 8 1 1.5e+04 -5.8 22.0 370 487 685 803 680 815 0.74
6 8 1 1.5e+04 -5.9 2.2 429 467 866 904 858 912 0.51
7 8 0.17 2.4e+03 -2.9 20.9 85 222 967 1106 947 1148 0.48
8 8 0.14 2e+03 -2.6 2.6 177 215 1240 1280 1162 1306 0.49

Sequence Information

Coding Sequence
ATGGTACTGGATACATTTTTAAGCGTGGAAAGAGACCGCCTCCGTGAGCGGGAACGGCAGGCGAGGGCCCAGATGTCTTCTCAAGTAGCGGATCAAGAAAGTCCGGGCACTTCCGGAAATTTCTTGTTTAGAGAACCCATAAGGATAAACCCTTCCACTGCCGACCCGGTCACCCAACAGATCCAGAGTAAGCTAGGCGACTTCCAACGGGTGAGACACTTCCTCGACCAAAAAGACTCCGGACTGATCGGCGTGGATGGAGTCCCACCAAGTCCGGGCGGTCCACCTCCACCTCCTCCGAGACATCACATGTCCATGCTTTCTGGACCACCGGTGGCAGGTGCTTCGAGCAGACTCCAGCCGGCGCCCGAATCACGCACGGAATTCAAGAAGCCGAACCATCACCACCTCCACCACCCCCATCAGAGGGGCGGGTATGTCAAGCCGGCCGAGGGCAAGCCGCCCTACGGGGGCCGCGGTGGCTACCCCGGCCAGCCCGTCAAACACGGCAGCGGCACCGTCAGCCACCGATCCAACGGCATCCTGCCGGCAAAGGGACCGCCTCCGTTGTCGCTGTCGTCCAGTTCTTCATCTATTCGCCTCCACGGCATCGACAGAATTCCACGCAGTCCCTACGAGCAGAACCAAGGCCCTACGGCTGGACCGAGGGAAACCCTGCCTTCCGCCACCCCGATTGCCGCTGAAGTGGATCACATATTTAAGGAAATGATAGACCAGAGAACACCACTGACTGCCATTGCGGCGACCCCCAGGATAGAACTCGACAACAAGTACAATTACAATCCGCTTCTTGCCAAGATACACGAGAAGACACCAGCGCCATCTGCAATTAAAAAACGTGATCGTCAACCGGCTCCACGGCCCCAAGAaagCCTAAGAGATGATCTCAACTTATCGGAGGAAAGCGATGATGAACATAAGAAGGAAGCTTTACATTCTTCTAATATAATTGTCGAAAAgatGTTATCGCCTCTAAGTGCTACTCCAGCAATACATAATTCAAAGATGGATGTGCCCGAACCTTTGGCACCCATCCCAACCTCACCGGTAGCTAGTTCTTCTAGTGACTCAGGATCTGATTCGGGGTCAGATAGCGAGTCCAGCAGTGACGATTCCGGAGAGGAAAATGTGACCTCAGTGGACGTACGTTTACAACCGCCACCTACAGAATTGCAGCCAGCGTCACCTCCGTCAGAAGACAGCAAAATTAGGTGGAACCTGGCATCTTTCGTGGGCAACAGCCAAAATATCACAGATCCCCTTACCTCTCCGTTAGTGTCTCCTGTTAAACCGTCTTGTTCGCTGCCAATAAAGACAAGTCCGGACAGTAGGAAAAGGGTTTCTGAGGAGTCGGACACCAGTGATTCCACTAAAGACATTGATGATATAGTGGCCAAGGCAAAAGCGCTAGCTGAATTAAGTAATTTGCCGTTACTGTCCAGTTTCTCTGACTCGGAAAACAGCAGCAAAGAATCAAATTCAAAGAAACAAAAGCATACCGTTCAACCAGTTACCAATCCTAATTTAAGTGACAGTGATTCAGATGTGAAAAGAACTAGTAAAAGAAAACCGGTGATTCGTGCTAGTCCCAGGACAAAATCAGTGGACTCCCACAGTGACTctgattttgaaaataaaacctATAGTGGCTTCGTTAACACCGCCCCCAAACCTATTTCCCCTGTGCCAGTAGTGAACCCAGAGAAAGTTACGAAACCTGGTCGAGGAAGGCCTAGGAAGATTAAACCTCCTAACGGCGATGAAGTGAAGAAACCAAGAGGTCGTCCAAAGAAAACGAGATCCCCTAACACTTCATCGGACGTCGAAAAGAAGAAGCCAAAGAGAGGTCGTCCGCCAAAATCTGTACTTCCACCATGTTCAAGCAGTTCCGACGAGGACGAGAAGTTTGAAAAGCCTCCACCTCCACCACGCCGCAGGACCAAATCAAAAGTGCAGACATCCAGCAGCTCAGATTCGGATAGTCCAGCACCAAGGCGACGAAACTCAAGCAGTTGCAGCAGTATTCGTCACGAGTCAGAAAGagaaattctaaaacatgagTCTCCAAAGAAAAGTTACAAACATAAATCTCCAAGGTCTGAGGAAAGGAAAAAAGCAAAGAAGAGCTCCGATGAAGAATGGGGCGCTGAAAATAAGGCGATCTTAAAAAATCACTTCAGGGATGACTCTATAAAGAAGAAATTGTCGGATAACTCAAAAGATGTCACATCACCGTTTAGGCGAAAAGGTCGACCGCCTTTACCCAAAAAGGAATCAAGTGATATTGAAAAGGTGAAATCTAAAGCTAAAGTAAGCTCATCATCCGAGGACTCTGATAGTGATATTACTTCACCATCGAAGAAAACTCTTAACAAAATAGATTCCACTATAAAGGTGGAAGAGAATAAGACGATAGCAGATAAGAATAAATACGATACCCTCCGTAAACTCTTCACACCTAAAAGGGACTCTGAAGGAGGCAAAGGTGGTGGAAAAGGAGGAGGAAAAGGTGGTGGTAAAGGAAAATGCGGGGTTAATGTGATAATAGTAGATGAAAATTATGAACGCAGTAGTTCATCCGTAGAGGACGAGGCTATGCCAACCATATCAACCAACCCCACCCTGCTGTCGCCTATATCCAATAATGAAGTGAAAAGAAAAAGTTCTGAACTGCCTTCTCATTCATCTTCACCTGTATATAATGACCCAATGAAATGTACGAAGACTGAAATTCCAATTAACGATAATATTGAAAAGATATCACTTTTGGTAAAGATAGATTTAAATCGGTTAGACTTATTTTCTATTCCCGCTTTGAGGAAATATATAGAGAACACTAGAAGGCTAACGGAGCCAAAAAAGGAAAACTTAGATAAGGCCAAAAAGGAAAATTTAGAGAAAACAGGTGACTGTGAAACTGATTTTAAAGTGAAGTCAACGAAGGAAAGTGATAACGAAACAAAAAGGGCGTTGCCACCTAAACTTGATCAGGATCACTCCGAGAGGAAACATAAACTGAAGAAACGCAAAAGGAGAAATAGCTCCAGCTCCATTTCTTCACTTTCGACAGTCAGTAACATGTCTCACAACAGTCACAAGAAAGAACACCAAATTAAAAAGGATAAAGATAATCCAAAATCTAAGAGACGAAGAGAAGACACTGAAGTTGCACGATCTCAAATTGATAATCTCAGTTTAATTAATGCCCCACCAACCAACCACGAACGGGAAGCAAGCAAGACTGTTCAGTACCTTGATGGGTCTATGTCCAGCAATCACACCCAGCCTACTAGAAAGTACCACTCATACTTTGAACCTCCAGAAGAACCATCTGAATATGAGGAGAGGGATCAAAACCAGTACCTGAGCGATGCAAAGAGATTAAAACACATGGCTGATGGAGAGACTGATACTATTAAACAATGTATGCTGTACCTGGAAGCTGTACTTTTCTTCTTGCTTACCGGCAACACCATGGAGCAAGAAagcatttcaaaaaattcagcCTTCACAATGTACAAAGACACACTTTCGTTAATCAAATATATTTCATCTCAGTTTAGGAGCCAGCAAAATGTATCCTCGGTTCATACTAAATTGGCTGTGTTAAGTTATCGGTGCCAAGCTCTGCTGTtttataagttatttaaaatgagGAAGCAGGAATCCAAGGAAGTGCAGAAAATTGTTAGTGATTATTGCAGTAAGAATGCCATTTCTCAAGATCAGCAGAACCACCAACAGGGCCAAGGTACTCCTTCTCCTCTGTCTCCCACCCCTTCTCCCGCCGGTTCCGTGGGTTCGGTGGGCAGCCAGTCCTCCGGGTACAGCAGTGGAGAATTGGCGGCGAGGGGAAACAATGCACTCATTCCTGCGACGCATGCTCAAAACGCCGGGGCATGGCTTCCGCTCTCTGTTTTTAACTCTGTGTCCTTGCAGAACCAGCTCTTCACATATCTAATCTCATTCCAGGATCATTGGGATATGGCCGACTCACTCATTATCAAGGGCAAACTTACAGaCTTCTTTATTGAGCTGGACAGGCAGTGCAGGCCTTTGACGATGCACAGTTCTCTCATAGACTTGGTCAGGTATGTAAGAGAAGGCATAAATCGCCTGAAGAGGGAGAGTTAG
Protein Sequence
MVLDTFLSVERDRLRERERQARAQMSSQVADQESPGTSGNFLFREPIRINPSTADPVTQQIQSKLGDFQRVRHFLDQKDSGLIGVDGVPPSPGGPPPPPPRHHMSMLSGPPVAGASSRLQPAPESRTEFKKPNHHHLHHPHQRGGYVKPAEGKPPYGGRGGYPGQPVKHGSGTVSHRSNGILPAKGPPPLSLSSSSSSIRLHGIDRIPRSPYEQNQGPTAGPRETLPSATPIAAEVDHIFKEMIDQRTPLTAIAATPRIELDNKYNYNPLLAKIHEKTPAPSAIKKRDRQPAPRPQESLRDDLNLSEESDDEHKKEALHSSNIIVEKMLSPLSATPAIHNSKMDVPEPLAPIPTSPVASSSSDSGSDSGSDSESSSDDSGEENVTSVDVRLQPPPTELQPASPPSEDSKIRWNLASFVGNSQNITDPLTSPLVSPVKPSCSLPIKTSPDSRKRVSEESDTSDSTKDIDDIVAKAKALAELSNLPLLSSFSDSENSSKESNSKKQKHTVQPVTNPNLSDSDSDVKRTSKRKPVIRASPRTKSVDSHSDSDFENKTYSGFVNTAPKPISPVPVVNPEKVTKPGRGRPRKIKPPNGDEVKKPRGRPKKTRSPNTSSDVEKKKPKRGRPPKSVLPPCSSSSDEDEKFEKPPPPPRRRTKSKVQTSSSSDSDSPAPRRRNSSSCSSIRHESEREILKHESPKKSYKHKSPRSEERKKAKKSSDEEWGAENKAILKNHFRDDSIKKKLSDNSKDVTSPFRRKGRPPLPKKESSDIEKVKSKAKVSSSSEDSDSDITSPSKKTLNKIDSTIKVEENKTIADKNKYDTLRKLFTPKRDSEGGKGGGKGGGKGGGKGKCGVNVIIVDENYERSSSSVEDEAMPTISTNPTLLSPISNNEVKRKSSELPSHSSSPVYNDPMKCTKTEIPINDNIEKISLLVKIDLNRLDLFSIPALRKYIENTRRLTEPKKENLDKAKKENLEKTGDCETDFKVKSTKESDNETKRALPPKLDQDHSERKHKLKKRKRRNSSSSISSLSTVSNMSHNSHKKEHQIKKDKDNPKSKRRREDTEVARSQIDNLSLINAPPTNHEREASKTVQYLDGSMSSNHTQPTRKYHSYFEPPEEPSEYEERDQNQYLSDAKRLKHMADGETDTIKQCMLYLEAVLFFLLTGNTMEQESISKNSAFTMYKDTLSLIKYISSQFRSQQNVSSVHTKLAVLSYRCQALLFYKLFKMRKQESKEVQKIVSDYCSKNAISQDQQNHQQGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELAARGNNALIPATHAQNAGAWLPLSVFNSVSLQNQLFTYLISFQDHWDMADSLIIKGKLTDFFIELDRQCRPLTMHSSLIDLVRYVREGINRLKRES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01226904;
90% Identity
-
80% Identity
-