Azie007681.1
Basic Information
- Insect
- Anopheles ziemanni
- Gene Symbol
- -
- Assembly
- GCA_943734765.2
- Location
- OX030919.2:92089999-92092953[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.52 1.1e+03 -0.1 0.0 26 54 220 248 204 248 0.86 2 12 1.2 2.6e+03 -1.3 0.2 17 33 307 323 302 336 0.72 3 12 4.8 1e+04 -3.2 0.0 27 46 421 440 419 444 0.85 4 12 1.7 3.5e+03 -1.7 0.1 27 32 590 595 586 605 0.76 5 12 0.013 28 5.0 0.0 21 45 694 718 688 721 0.89 6 12 0.00066 1.4 9.2 0.0 21 44 722 745 718 749 0.91 7 12 0.012 25 5.2 0.1 21 45 750 774 746 779 0.89 8 12 0.31 6.6e+02 0.6 0.0 21 48 802 829 789 834 0.84 9 12 0.00047 1 9.6 0.1 21 52 831 862 821 863 0.82 10 12 0.12 2.5e+02 2.0 0.0 22 44 888 910 885 914 0.88 11 12 0.0042 8.8 6.6 0.1 21 48 915 942 910 946 0.86 12 12 0.00071 1.5 9.1 0.0 21 45 943 967 939 973 0.91
Sequence Information
- Coding Sequence
- ATGCTCGGTAAATATGCTGACGCGAGTTCCAGCTCGATGATAAACCTGGAAAATGGGCTCCGCAACCGTGTGCTGTACCATCAGAACATGATGGGTATGAATCTGATGGCCGAATTTTACCACAACCCTCTAATGAATTCCTCCGGAAGCAACGGTGCCGGTGGTAGCGACGCTGTTGGAGCCGGCTCAATGCTATCGCCATCGCAAAAGATGCTCAACATTCTGTCAGTTAGCGCTGGAAGCAATCTGCAACCGCATCACACCGGAAATAGTTCCGTAGTGTCAACAGTGCCGGTAGGTTCTGCATCGACGGCGTCAAGCGGTTCATCGCAGCAATCGTTGGTACAGTTGCAATGTCAACTTTGCCAAAAGTACTTTATTTCCGGGGCGGCGCTCGCGCAGCATATTAAAACACACGAAAATGATTACCTTGCGCGGGAAGAATCCGGTCCCAGCGGCGGTTACAGTCAACAGCAGTCGATAACGTCCGCTCCATCGCTTGTAACGACGGTGGCTTCGAGTAGCAAAACTAGTTCACCATTGCTTGCACAGCAAAGCATCAAGAGTGAGTATATTGTACGTAGTACGTCGTCTTCGTCTGTGCCCTTGCCAGGTGGGAACCAATTTCCTACAGCATACGGTATTACGAAACAGTTTGACTGTCACATCTGCCACAAATCGTTCATGACGATGATGAACCTTAACCTGCATATGAAAATCCACGAAGAGTTCAAACCGGCTGTGGTGTCTTCTCTTGCGAATCCGTCCGGTGGTAGCAGCGGAACCGTAACGTCACAGGCGCAAAAGCCGCTCAACATTATGTCGCACCATACCAGCGCGGGAAGTACTCCACAACTGCAGCACTCCGTAAATGGTTCGGTTGTGACGACAATAGCACTAGGCGCCGTGCCGTCGACATCGAGTGGTACATCGCAGCAAGCGTTGCAATGTCAAATTTGTCAAAAGTACTTCATTTCCGGCACTGCACTGGCGCAGCATATTAAAACACACGATAATGACTACCTGGCGCGGGAAGAATCCGGTCCCGGTGGCAGCTATAGTCAGCAGCAATCGTTAACGTCGGCACCCTCGCTAGCAACGGCAGTGGCATCGAGCAGTAAAACTAGTCCCCCACTGCTTGCACAGCAGAGCATAAAAAGTGAGTACATTGTACGAAGTGGTGCATCATCTTCTTCTACCGTGCCCGTGCCAGGTGGGAACCAATTCGCTCCCGCGTATGGTATTACGAAACAGTTTGACTGTCACATCTGCCACAAATCGTTTATGACGATGATGAACCTTAACCTGCATATGAAAATTCACGAAGAGTTGAAACAAACAGCTGCAACCCACGTCTACACCCATGCCCCGACCCTTGGCGCTACAAGTGCAGGGACATCGTCTAACGAttatcatcaccaccatcagcagcaccaCAACAATTATCACAACAACCCGCAGCAGCACATTTCGATGGTGGCAGCGACAACGATTGGGACGGATGGTGCGTGCCAGATTTGCCATAAAACATTCAGCACGGTCGAGCAATTTACGGCGCACATGAAGATTCACGAAAACGAGTTTAGGAATCGTGCGCTCTATCACTCCGGTAGCTCCAATACCATCGGTCCCGGTGTAGAAGGAAGTGTAGTTGTCCAGAGTACGCCAACGACGACAGATTCTTTCTATTCGTCCACTCAATCACAGCCGATCCTCGCACAACAACAAACGACTGCACCACAGTTTGATGCCATGAAAGGATATCGATGTCCCATTTGTCACAAAATGTCCAGCAACATCATCGAACACATCAAACAACACGAAGGGCAGCTAATGTTAGGTGAAGGGGCTGCAAGTAGTCGAAGTGGAACGACACCACCCACGCCGGATGTGACATCGCCTGCGCCGGAAGGGTTGTCGTACCATCCGATGAATGAAGATACGCAATCATCGCTCGAAGGAGACGACAGCGAAGGCCAGACGGGAGAAGGTGCCGATGTTCGAAAGCACGAGTGCCTACTCTGCCACAAAAAGTTCTCGAGCTCGGGAAATTTAGCCATTCACATACGGGTGCACTCGGGCGAGAAACCGTTCAAATGTAGCGTCTGCGGGAAGGGTTTCATCCAGTCGAACAACCTGGCGACGCATATGAAAACGCACACCGGCGAAAAGCCGTACGCGTGCACGATTtgcgggaaaaacttttcgcaATCGAACAACCTGAAAACGCACATCCGGACGCACACCGGCGAAAAGCCTTACGCGTGTACCATCTGCGGGAAGCGGTTCAACCAGAAGAACAATTTGACCACGCACATGCGCACGCACCAGCTGGTGTGCATGGTGTGCGGCGTGCAGTTCATGCATCCGTCCGACCTGGCCAATCACATGAAGTTTCACAATGACGAAAAGCCGTACATCTGCTCGGTTTGCAACAAGGTGTACCTCAACCTGGACGAGCTTACCGAGCACATGAAGAAGACCCACAACCAGGTTAAGCCGTACCGGTGCCACATCTGCGACAAAACGTTCACCCAATCGAATAACCTGAAGACGCACATCAAAACGCACATCTTTCAGGATCCGTTCAAATGTCAGATGTGTTCGCGCTCCTTCCAGAAGGAGGACGACTACTCGCAGCACATGCTGGTCCACACGGCCGACAAACCGTACGAGTGTACGTACTGCGGGAAGCGGTTCATTCAGTCCAACAACCTGAAGACGCACGTCCGGACGCATACGGGCGAAAAGCCGTACCGTTGTACAATCTGCGCAAAGCACTTCAACCAGAAAAACAATCTCAATACACACATGCGCATCCATACCGGCGAAAAGCCCTTCGAGTGCACCATCTGCGATAAGCGGTTTAACCAGTCGAACAATTTGAACAAGCACATCAAAACGCATGGTCAAGAAAAGGacacgcagcagcagcagccacagcACGCAAGTTGA
- Protein Sequence
- MLGKYADASSSSMINLENGLRNRVLYHQNMMGMNLMAEFYHNPLMNSSGSNGAGGSDAVGAGSMLSPSQKMLNILSVSAGSNLQPHHTGNSSVVSTVPVGSASTASSGSSQQSLVQLQCQLCQKYFISGAALAQHIKTHENDYLAREESGPSGGYSQQQSITSAPSLVTTVASSSKTSSPLLAQQSIKSEYIVRSTSSSSVPLPGGNQFPTAYGITKQFDCHICHKSFMTMMNLNLHMKIHEEFKPAVVSSLANPSGGSSGTVTSQAQKPLNIMSHHTSAGSTPQLQHSVNGSVVTTIALGAVPSTSSGTSQQALQCQICQKYFISGTALAQHIKTHDNDYLAREESGPGGSYSQQQSLTSAPSLATAVASSSKTSPPLLAQQSIKSEYIVRSGASSSSTVPVPGGNQFAPAYGITKQFDCHICHKSFMTMMNLNLHMKIHEELKQTAATHVYTHAPTLGATSAGTSSNDYHHHHQQHHNNYHNNPQQHISMVAATTIGTDGACQICHKTFSTVEQFTAHMKIHENEFRNRALYHSGSSNTIGPGVEGSVVVQSTPTTTDSFYSSTQSQPILAQQQTTAPQFDAMKGYRCPICHKMSSNIIEHIKQHEGQLMLGEGAASSRSGTTPPTPDVTSPAPEGLSYHPMNEDTQSSLEGDDSEGQTGEGADVRKHECLLCHKKFSSSGNLAIHIRVHSGEKPFKCSVCGKGFIQSNNLATHMKTHTGEKPYACTICGKNFSQSNNLKTHIRTHTGEKPYACTICGKRFNQKNNLTTHMRTHQLVCMVCGVQFMHPSDLANHMKFHNDEKPYICSVCNKVYLNLDELTEHMKKTHNQVKPYRCHICDKTFTQSNNLKTHIKTHIFQDPFKCQMCSRSFQKEDDYSQHMLVHTADKPYECTYCGKRFIQSNNLKTHVRTHTGEKPYRCTICAKHFNQKNNLNTHMRIHTGEKPFECTICDKRFNQSNNLNKHIKTHGQEKDTQQQQPQHAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108044;
- 90% Identity
- iTF_00108044;
- 80% Identity
- iTF_00109283;