Basic Information

Insect: Anopheles ziemanni
Gene Symbol: -
Assembly: GCA_943734765.2
Location: OX030919.2:9302478-9304808[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.2e-06 0.00017 21.9 2.5 1 23 239 261 239 261 0.98

2 15 0.0008 0.062 13.9 4.0 1 23 269 291 269 291 0.96

3 15 1e-05 0.00078 19.9 0.2 1 23 300 322 300 322 0.98

4 15 1.8e-06 0.00014 22.2 5.2 1 23 328 350 328 350 0.98

5 15 0.005 0.39 11.4 0.2 2 23 358 379 357 379 0.97

6 15 0.00028 0.022 15.3 3.3 1 23 385 408 385 408 0.94

7 15 0.0027 0.21 12.2 6.2 1 21 414 434 414 435 0.94

8 15 0.032 2.5 8.8 3.3 3 23 443 464 441 464 0.94

9 15 9.3e-06 0.00073 19.9 0.7 1 23 499 521 499 521 0.97

10 15 0.0019 0.15 12.7 0.1 1 23 532 554 532 554 0.93

11 15 2.8e-06 0.00021 21.6 2.9 1 23 584 606 584 606 0.99

12 15 0.19 15 6.4 4.2 2 23 641 662 640 662 0.94

13 15 0.17 13 6.6 7.0 1 23 668 690 668 690 0.98

14 15 2.1e-07 1.6e-05 25.1 1.5 1 23 698 720 698 720 0.99

15 15 0.00067 0.052 14.1 0.8 1 23 726 749 726 749 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.2e-06	0.00017	21.9	2.5	1	23	239	261	239	261	0.98
2	15	0.0008	0.062	13.9	4.0	1	23	269	291	269	291	0.96
3	15	1e-05	0.00078	19.9	0.2	1	23	300	322	300	322	0.98
4	15	1.8e-06	0.00014	22.2	5.2	1	23	328	350	328	350	0.98
5	15	0.005	0.39	11.4	0.2	2	23	358	379	357	379	0.97
6	15	0.00028	0.022	15.3	3.3	1	23	385	408	385	408	0.94
7	15	0.0027	0.21	12.2	6.2	1	21	414	434	414	435	0.94
8	15	0.032	2.5	8.8	3.3	3	23	443	464	441	464	0.94
9	15	9.3e-06	0.00073	19.9	0.7	1	23	499	521	499	521	0.97
10	15	0.0019	0.15	12.7	0.1	1	23	532	554	532	554	0.93
11	15	2.8e-06	0.00021	21.6	2.9	1	23	584	606	584	606	0.99
12	15	0.19	15	6.4	4.2	2	23	641	662	640	662	0.94
13	15	0.17	13	6.6	7.0	1	23	668	690	668	690	0.98
14	15	2.1e-07	1.6e-05	25.1	1.5	1	23	698	720	698	720	0.99
15	15	0.00067	0.052	14.1	0.8	1	23	726	749	726	749	0.96

Sequence Information

Coding Sequence: ATGGACTACAATGCATACAACAACAAGCTGTATGCCGGGGTGTCGCAGCCCATTCCCGGGAGCTCCGGGTTCTTTCAGCCAAGTGCCGCAACACCGACGTTCCTTAAGGTCCCTAATCCCGCGCTGATCAAACAAGAGTCTTCCGTTGGTGTAGGAACTCTCGGAGAAACCCCTACGCCGCCTGTAAATTACAGCCAAAACCAGCATTATGTGAACCATGGCGTTTCGGTGGATCCGGAAAAGCCGCTGTTCTACCGACCGAAACCGTTTGACCTGCAGTTAATGTCCAATGCCTATATGCAGCACCATCCGCATCAGCAGTTTATGCAGCATCCACACCATCACCATTtacagcatcaacagcagcagcaacaacatccacctccacaacaacaacagcaccatcatcagcaacaacaTCTTTCGTCAGTGCCATCGCACGTACAACCCCAACAGCAACAGGTGCAGGTTGttacgcagcagcaacatcagcatgcGACGAGCTTTCACGAGTTTCCTGACCACTCCAATGCGTCCAGCGTTGGATCGTCTTCCATCGAACCACAAGCGTACATAGTACACCGGCAACCGGTGGTTCCGTTGCAAATAATGAAGGAAGAAACATTTCCTCCTGCGGTTCCAGCTGCCAGTTACACTCCAACGGCCGTGGACACCCCACCGGCACCGGCCCCTGTCGTTTCGCAAGTAACGCGTTTTAGTTGCGATTCCTGCCCGAAGACGTTTGACACGAAATCGAAGCTAGAGAAACACACCAAGACGCACCTGGTGTACGAGGAGCAGGTCTTCAAGTGTCGCATGTGTGATAAGATCTTTCGCACCAAGAGCACACTTATCTGCCACGAGAAGGTGCACGGCGAGAATGGGGTGGACAATAGCTTTTCGTGCGTGGAGTGCGGTAAGGTGTTCGCTTCGGATGATAAATTGCAGGTCCACCGGCGGCTACACACTGGGGAAAAGCCGTACCAGTGTAAGGTGTGCCAAAAGTGCTTTAATCACCAGTCGAACCTGATCGTGCATTCGCGCATCCACGAAAAGGTAAAGAAGGCACTGAAGTGCGATCGGTGCAGCAAGGTGCTGGACAATGAGGAGCGCCTGGCCATACATATGCGGTTGCATACGGGCGAAAAACCATACAAGTGTTCGTACTGTGAAAAGCGCTTTAATCACAAGAGTACGGTGAGCACGCACGAAAAGGCGGCCCATATCGCAGCCAACTCGTTCAAGTGTGACCGGTGCCACAAGACGTTCAATCAAAAGTGCCAGCTGCAATATCACGAGAAGCTACAGGAAGAGCACACGATCGCGTGCACCCTCTGCGATAAGGTGTTCTGCTACAAGGCAAGCCATAAGGAGCACATGTTTAAGGTGCATCTACCTCGGCCGAAGAAGGAACCGAAAAAGGAACCGTCGGGTTCGGGGGCCGAAGGATCCGGTGCGACATCCGGTGGGACCGGTTCCCAGGGTCGCAACAAATTCAAATGTACCGTGTGCGATCGTCGGTTTTATTATAAGCGCGCGCTCGAAGTTCACATGGGCGTGCATGATGCGTCGTTGGATGTGAACGTGCTGCACTTCTCGTGCAACTACTGCCCGGAGACGTTCACCGAGGAAGAACCGTTGGAGCAACACGAGGCCGAGCACGTGGCTCTCGGAACAACGGATTTTCTCGTGAACATGAAAGCGCTCGAACAGTCGGAAAATCCCGCCAACGGCCAGGTGGACGGAGGGTTCCGGTGTCCACTGTGCTTCAAACGGTTCGACGATCAGTCGGCACTACGCGAACACCACCGTACGCATCTTTGTGCGCGACCCGATTGCACCAAATGCGAACGGGCCCGCGGGGAAGAATTCGATATCAACATCACCACGTACGATGCCGAAGAGGATCGGCGCGAAACGGTGTGCAACATTTGCCACCGGACGCTGCCCTCCTTCGAACAGTTTCAGAACCACTTCCACTATCACACATCGCGGGTGCCATTCTACTGCTTTCACTGCCGGGTGGAGTTTCACGACAAGCGCGAACTGTACTCGCACTCCCGCACACACTCGCCGCGCGAACTGGAGTCGTACACGTGCGAGATCTGTGCGAAGGTGTTCTCGACGAAGGGCAACTTTAAGCGCCACCTGAAATCTCACGAAACGGTCCGGGCGTTCGCGTGCGACCGGTGCTTCAAGCAGTACGACTATAAGAGCGCCCTCGAGGCACACTTGAAGCGATCCCACGGTATCGAGTTGTAG
Protein Sequence: MDYNAYNNKLYAGVSQPIPGSSGFFQPSAATPTFLKVPNPALIKQESSVGVGTLGETPTPPVNYSQNQHYVNHGVSVDPEKPLFYRPKPFDLQLMSNAYMQHHPHQQFMQHPHHHHLQHQQQQQQHPPPQQQQHHHQQQHLSSVPSHVQPQQQQVQVVTQQQHQHATSFHEFPDHSNASSVGSSSIEPQAYIVHRQPVVPLQIMKEETFPPAVPAASYTPTAVDTPPAPAPVVSQVTRFSCDSCPKTFDTKSKLEKHTKTHLVYEEQVFKCRMCDKIFRTKSTLICHEKVHGENGVDNSFSCVECGKVFASDDKLQVHRRLHTGEKPYQCKVCQKCFNHQSNLIVHSRIHEKVKKALKCDRCSKVLDNEERLAIHMRLHTGEKPYKCSYCEKRFNHKSTVSTHEKAAHIAANSFKCDRCHKTFNQKCQLQYHEKLQEEHTIACTLCDKVFCYKASHKEHMFKVHLPRPKKEPKKEPSGSGAEGSGATSGGTGSQGRNKFKCTVCDRRFYYKRALEVHMGVHDASLDVNVLHFSCNYCPETFTEEEPLEQHEAEHVALGTTDFLVNMKALEQSENPANGQVDGGFRCPLCFKRFDDQSALREHHRTHLCARPDCTKCERARGEEFDINITTYDAEEDRRETVCNICHRTLPSFEQFQNHFHYHTSRVPFYCFHCRVEFHDKRELYSHSRTHSPRELESYTCEICAKVFSTKGNFKRHLKSHETVRAFACDRCFKQYDYKSALEAHLKRSHGIEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00094080;
90% Identity: iTF_00096526;
80% Identity: iTF_00096526;