Aste006989.1
Basic Information
- Insect
- Anopheles stephensi
- Gene Symbol
- Hr39
- Assembly
- GCA_013141755.1
- Location
- CM023249.1:75975875-75983636[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.12 6e+02 -0.7 0.3 118 151 61 96 50 161 0.59 2 5 2.3 1.2e+04 -4.9 1.5 139 149 240 250 215 284 0.47 3 5 1.6 7.9e+03 -4.4 2.5 61 131 383 402 350 436 0.39 4 5 5.9e-08 0.0003 20.1 0.0 1 20 590 609 590 614 0.93 5 5 2.7e-79 1.4e-75 255.0 0.0 157 408 693 954 683 954 0.91
Sequence Information
- Coding Sequence
- ATGAGAATAATGACATCGACCGAGGTAAACGGAGGCGGTGGTACGCCCACGACCACACGCGGCGGAAACGTGTCCGTGACGACGATCAACTGTGGTGACGACGGCGGTATGGGCGGCACAACGTTGGACATGagcggtgttggtggtggtagtataGTGGCGGCAatcaagcacaacaacaacaataacagcatcaacaacaataacaacaacacgaCGAGTAGTAATAGTGTGAATAATAACACCAgcaccactactactgctaccactACAGGAACGAGTAGTAGCGGTGGTGGGGGTGGTAGTCCAGGTGGCATCTTTGGAAACGTGAGCGGTGGAGTACGCATCACCGTGCCGAAGATGGAAGAGTCGGACGAGTCCGATACGGAGCTGTCCAACATCGAGAAGACGGCAGCAGCGGCACTGACGAACGGCGTCAATATGCGCGAGGAACGTAGCGCCAGTAAGAGCCTTCCGCGACCCATGTCCTGGGAGGGTGAACTTTCCGAACCGGAGGAACCGATGCTGGTGGACAATGAGAATTCTAGCTCCAGctcggttggtggtggtggcagtaAGCACGGGATAGCACCGATCGATCCTTCCCCGATCGCGATGATTGTGCCGAAGCGCGAGGAAGAGCTGGACACCGAGGTACCGACGTCCGGACCGGGCATTACGGAACCGTTGGCACTGACCGCTTCCAGCAgtaatagcagcagcagtagcagcagtaccggTGGCTACAATCTTTCCTCCCAGAGCGGTGGCACGATTCGGAATGCGCACAGTAACAGCAATACCGGTAGTAGCAGCTCCAGCAACTCACCACTGCCGAATCGGCTCATGATCAAACCGGAAGCGGGGCTTCCACTGATCAATCCCGGGCTGGCGTACAACGTGTCCGGGCTCGGGAACAACTCCTCCAACATTCCAACGTCTTCGGGAGCTTCGTCGTCCACGGTGAAGAAGGCCGGACTTCCGGATGTGATAAACCTGAAGTACGAACTACcaccgggtggtggtggtggtgatccgGGCGGCGGTAGTGCACTTCCACCGAGTGCAATCCATTCGCCGCTGTTGGTCCGTTCGAAGACGACGCTGCTGCCCGCGAATCCCAGTCCCGACTCAGCCATCCACTCGGTGTACACGCACAGTTCGCCGAGCCAATCGCCACTCACATCCCGCCATGCACCGTACACGCCATCGCTCAGCCGGAACAATAGTGACGCGTCGCACAGCAGCTGCTACTCGTACAGCTCGGAGTTCAGCCCGACGCATTCGCCCATCCAGGGCCGGCATAACATCttcgccggtggtggtggtggtggtggaggaggagggggcggaggaggaggaggcagTGCATCCTTCAACGGATCACCGTTGCATCACTCAGTATTATACAAACCGATGCTGGAtagcgagcagcagcaacagcaagcccTTAAACAGCTGGCTGCAGCGGCGGCTGCCGCGGCCCAAGAAGAACCGCTCTACGATGGGGAACATTTGCCTTCGCCCGGGATATCTCGGCAGCAGCTTATCAACAGCCCGTGTCCCATCTGTGGCGATAAGATATCCGGCTTCCATTATGGCATTTTCTCGTGCGAGTCGTGCAAGGGCTTCTTCAAGCGTACGGTGCAGAACCGTAAGAACTACGTGTGCCTTAGGGGGGCGGCCTGTCCGGTGACGATAGCGACACGCAAAAAGTGTCCCGCCTGCCGGTTCGAGAAGTGCCTTCAGAAGGGGATGAAATTGGAAGCTATTCGGGAGGATCGAACACGTGGAGGACGCTCAACGTACCAgtgctcgtacaccttgccagGACCGTTGGTAAACGCGGGCGGTGGTATGCAACCGGGTGACTCACCGGGCGCGGGACCATTCCAGTACGGTGGTTCGGTACGATCACCGTACGTTGGAGGAGGTtccggtgttggtggtgttggagGACAGCAGATGAAGATGGAACCACCGGACGGTGGTATGATGATGGTCGGATCGGGTTCCATTGGCGGAGGGAACGGTGGCATGAATGGAATGGGCAATGGACTCGGTTCGGATGGTATTAGCAGCTCCGGTGGAGCTAATCACATGCAGCCAGGCATTCCAGTACTGTTACAGGAAATTATGGACGTTGAACCGCTGTGGCAGTATAATGCTCAGGAGCTGGCCCGACTCAACCAACCGCCAACGAACGTAAGCAGCACGACGATCGCCAACAATCCGATCCTGTCGAGTGCCGGCATCTCGTCCGACAGCAGTCCCGATCTGATCGCTAACCTCTGTAACATTGCCGACCACCGACTGTACAAGATCGTCAAGTGGTGCAAAAGTCTGCCACTCTTCAAGCACATTTCCATCGACGATCAGATCTGTCTGCTGATAAACTCCTGGtgtgagctgctgctgttctcgTGCTGCTACCGTTCGATCTCGACACCGGGCGAGATTAAGATTTCCCAGGGCAAATCGATCACGCTGGATCAGGTTAAGAATAGTGGTTTGCAGACGTGTATTGAGCGGATGTTAAATCTAACCGACCATCTGCGACGATTGCGCGTCGATCGGTACGAGTACGTGGCGATGAAGGTGATCGTGTTGCTCTCTTCGGACACATCCGAGCTGAAGGAATCGGAAAAGGTGCGGACGAGCCAGGAGAAAGCATTGCAGGCCCTGCAAGCCTACACACTGGCCCACTATCCCAAGTCGCCGGCCAAGTTTGGCGAGCTGTTGCTGCGCATTCCCGAACTCCAGCGCACCTGTCAGGTCGGTAAGGAGATGCTCACAATCAAACCGAAGGATGGCGAGGAGCCATCGTTTAACCTGCTAATGGAACTGCTCCGTGGCGAGCACTGA
- Protein Sequence
- MRIMTSTEVNGGGGTPTTTRGGNVSVTTINCGDDGGMGGTTLDMSGVGGGSIVAAIKHNNNNNSINNNNNNTTSSNSVNNNTSTTTTATTTGTSSSGGGGGSPGGIFGNVSGGVRITVPKMEESDESDTELSNIEKTAAAALTNGVNMREERSASKSLPRPMSWEGELSEPEEPMLVDNENSSSSSVGGGGSKHGIAPIDPSPIAMIVPKREEELDTEVPTSGPGITEPLALTASSSNSSSSSSSTGGYNLSSQSGGTIRNAHSNSNTGSSSSSNSPLPNRLMIKPEAGLPLINPGLAYNVSGLGNNSSNIPTSSGASSSTVKKAGLPDVINLKYELPPGGGGGDPGGGSALPPSAIHSPLLVRSKTTLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNIFAGGGGGGGGGGGGGGGGSASFNGSPLHHSVLYKPMLDSEQQQQQALKQLAAAAAAAAQEEPLYDGEHLPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTIATRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPGPLVNAGGGMQPGDSPGAGPFQYGGSVRSPYVGGGSGVGGVGGQQMKMEPPDGGMMMVGSGSIGGGNGGMNGMGNGLGSDGISSSGGANHMQPGIPVLLQEIMDVEPLWQYNAQELARLNQPPTNVSSTTIANNPILSSAGISSDSSPDLIANLCNIADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCYRSISTPGEIKISQGKSITLDQVKNSGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLSSDTSELKESEKVRTSQEKALQALQAYTLAHYPKSPAKFGELLLRIPELQRTCQVGKEMLTIKPKDGEEPSFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00097815;
- 90% Identity
- iTF_00097815;
- 80% Identity
- iTF_00108452;