Aste006004.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles stephensi
Gene Symbol
sip1
Assembly
GCA_013141755.1
Location
CM023249.1:67434498-67437902[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.4e-97 4.9e-93 311.5 9.3 1 275 450 721 450 721 0.98

Sequence Information

Coding Sequence
ATGCAAAACCGGCCGAAAAAATCGAGTCAATTTCAGCGAAAGCCGTACAAAAGTTCACCTGTGCGCTCGATTCTTCTACTAACCAATCTCACCATGGACGACGAAGAGTACGAACGCTTCGAAATCACCGATTACGATCTGGACAACGAGTTTAACCCAAACCGAGGCCGTCGGCGTCCTACAAAGCATCAGCAGATCTACGGCATCTGGGCGGACGATGATTCCGAGAACGAAGGCGACGAAGGCACCTCCACTGGTGGAGGTCGACGCAGAGGACGCCAGGTCGGTAAGAAACCGAAGGACTACTCTGCCCCGATTGGTTTCATTGCCGGTGGTATTCAGCAGTCGGGCAAAAAGCCTGACCCGGCCCAAGAACGCAAAGCATCCGACGAGGACGATGAAGGTGATGAAGATGACTCAAGGCCAAGGTTTGGTTCGAAAGTTAAACCAAGCGGTAGCAATACATCGTCCGAATCGGAAGAGGAAAAACCTCCCGTGCATGATATGCGATCGATGGCCGGTTTTCGAACGTTTAGCAGCGCTCCGGCGATGGCAGCCAAAGGTGGTAAAAACATGGCCAACTGGGAGCAGCACACGCGTGGCATCGGTGCGAAGCTGCTGTTGCAGATGGGCTATCAAccaggcaaaggtctgggaaAAGATTTGCAGGGCATTTCAGCGCCAATCGAGGCACATCTGCGCAAGGGCCGTGGTGCTATCGGTGCGTACGGTCCGGAGAAAAAGACAGTCGTCGCGGATGCGAAACTGAAGCAAAAGCAGGATGATTCGAAGGCATTGCCGGCGGGCAGTGCGGAGGAGGAAAGCGGACAGTGGCGCAAGGATGGCAAGCAAGGTAAATCACGCTACTTTTACAAATCCGTGGAGGACGTTATTGAGAAGGGTAAGAAATCAACGTTATCAACGTATGCGCCGTTTGATAAGACTGCCTCGAAGCTGAGCCAGGTGACGGTAATCGATATGACTGGGCCGGAAAAGCGTGTCCTCAGCGGGTATCATGCCCTCGGCCAAGCGAAGGTGATCGACGAGGAACTGTACGAGCCGGGACTGACTGGTAGTAAAGCAGCTACCACCCCTAAAGAAATGACTCACTTTTCCCTGCCCGAACTGATGCACAATCTTAATCTGATGGTAGACTACTGCGAACAGGACATCATCGCGATTGATAAGCAAAAGTGTGAAGCTAAAGATCGCGAAGAGCAGCTGCTGCACGAGAAGCAAAATTTGATACGTATAAgcgagctggagaaggattATCTTCACACGCTGGAGGGAGCGCTTGAGCTGGTGCGGGCACTGGTCGAACCGCCGGCTGACGGACCGATTGAGCTGGAAGAATGTGAGAGAATCTTCGTGCGCCTGTACGCAGAATATCCGGCCGAATGTAAAGAGTTTGGTCTGTCGGACCTAGCGGCAGGTGTGGTTGCTCCACTGATTGCCGCTCGGCTTAAAGAATGGACACCGTTCAGCGAACCGACGCGCCATTTGGACGTGTTTAAGCGGTGGAAATCTATACTGGCCTCTGCCAACACGGacagcaacagtagcagcagcaacagcctgCTCAATCCCTACTCGGCCGTTGTTTGGACCGGTGTAGTTCCCAGCATACGAGCGGCGGCAAACGAATGGAATCCTCGTGTCCATCAGCCAATGATAGCTTTGCTGGATGCTTGGGCACCCCTGTTACCAGCATGGATACTGGACAACGTGCTCGAGCAGATTGTGTTGGTCAAACTGTCGGCAGCCGTCATCGAATGGGACCCATTGACCGATACGGTTCCCATCCACTGCTGGATTCACCCGTGGACGGAACTACTTGGGCCAAAGATGGAAGGTAACGTCTATCCAGCCATTCGTGAAAAATTGGCCCGCGCCCTCAAAGCTTGGCATCCGGAGGATCGGTCCGCCCGCGCAATGCTAACCCCGTGGAAGGGCGTCTTTGCCGAGGAAGATCTGCAGGTGTTCCTGGCCAAGAACATCATACCCAAGCTCGAGCTGAGGCTTACCGAGCTGATCATTAATCCGCTGCAGCAAGATTTGGAAATATTCAACCAGGTGTGGGAATGGAACGAACTCATCTCACCACTGCAAATGGCCACCATACTCGACAAGTACTTCTTCCCCAAGTGGCTCCAGACGCTCGTCATCTGGCTCAACCAATCGCCCAACTTCGATCAGGTGTCGCGCTGGTACCAGGGCTGGAAGGCACAGTTCACGGACGATGTCGTGCGCCACCCGAACGTGAAGGAATGTTTCCGCAAAGCGCTCGAGCTGATGCAACGTTCGATTGGCATGGGCAGCGGCGGTGTGGCAGGCGCTGCGTCAAGCTCACCTCCGGTAATGATGGAACCGATACCGCCGCCACCGAAACCACCCATCCCGATGGACATTTCGGTCGACACACAGGCGCCAACGCTCGAGTTTAAGGAGCTCGTATCGCAAAAGTGTGCCGAACGGGGCATTATCTTTGCACCGATGCCGGGACGCCGGGAGCTGGGCAAACAGGTGTACCGCGTTGGGAAGCTGTTTTGCTACATCGATCGGTCGGTGTGTATCATCAGTCCGGATGGAGGTGTGAGCTGGACGCCCATATCTTTAGCGGCGTTACTGGAACGGGCTGTCAGTGGATAA
Protein Sequence
MQNRPKKSSQFQRKPYKSSPVRSILLLTNLTMDDEEYERFEITDYDLDNEFNPNRGRRRPTKHQQIYGIWADDDSENEGDEGTSTGGGRRRGRQVGKKPKDYSAPIGFIAGGIQQSGKKPDPAQERKASDEDDEGDEDDSRPRFGSKVKPSGSNTSSESEEEKPPVHDMRSMAGFRTFSSAPAMAAKGGKNMANWEQHTRGIGAKLLLQMGYQPGKGLGKDLQGISAPIEAHLRKGRGAIGAYGPEKKTVVADAKLKQKQDDSKALPAGSAEEESGQWRKDGKQGKSRYFYKSVEDVIEKGKKSTLSTYAPFDKTASKLSQVTVIDMTGPEKRVLSGYHALGQAKVIDEELYEPGLTGSKAATTPKEMTHFSLPELMHNLNLMVDYCEQDIIAIDKQKCEAKDREEQLLHEKQNLIRISELEKDYLHTLEGALELVRALVEPPADGPIELEECERIFVRLYAEYPAECKEFGLSDLAAGVVAPLIAARLKEWTPFSEPTRHLDVFKRWKSILASANTDSNSSSSNSLLNPYSAVVWTGVVPSIRAAANEWNPRVHQPMIALLDAWAPLLPAWILDNVLEQIVLVKLSAAVIEWDPLTDTVPIHCWIHPWTELLGPKMEGNVYPAIREKLARALKAWHPEDRSARAMLTPWKGVFAEEDLQVFLAKNIIPKLELRLTELIINPLQQDLEIFNQVWEWNELISPLQMATILDKYFFPKWLQTLVIWLNQSPNFDQVSRWYQGWKAQFTDDVVRHPNVKECFRKALELMQRSIGMGSGGVAGAASSSPPVMMEPIPPPPKPPIPMDISVDTQAPTLEFKELVSQKCAERGIIFAPMPGRRELGKQVYRVGKLFCYIDRSVCIISPDGGVSWTPISLAALLERAVSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00106979; iTF_00093450; iTF_00104365; iTF_00100950; iTF_00095642; iTF_00099654; iTF_00100300; iTF_00103007; iTF_00106399; iTF_00105133; iTF_00101670; iTF_00097767; iTF_00098994; iTF_00103667; iTF_00096379; iTF_00109138; iTF_00095069;
90% Identity
iTF_00097767;
80% Identity
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