Basic Information

Gene Symbol
ARID5B
Assembly
GCA_013141755.1
Location
CM023248.1:1745039-1770769[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-12 2.7e-09 37.1 0.1 2 89 1138 1218 1137 1218 0.89
2 2 7 1.5e+04 -5.1 1.1 3 18 2126 2141 2115 2151 0.55

Sequence Information

Coding Sequence
ATGAGGACATCTTCGTCCATCCTGTGTGTTATTCTTTGGTGCACTTTGCTATACATTTGCTCGCCGGTAGGAAGCACAACTCCATCGACCCGACACAATCGGGACCTGGAAGCAGCACTGCTTGATTTGTTCGAGCCAAATGATCTTCAAATCGACGATGCCGACAGTGGCCGTATTTTCGCCCAAAAGCGTGAAGAAAAGCGAGTCCTGAAGGAATtgtactatctagcgaaagtGCTTAAAGCCTTTCGACTTCCGCATGCCTACGGAAGTACCGTGTTCAAGAGTGTCATCGATCGAGTTACCAACAAGGAGCTGCTCGATCAGCTCGAACGTAAACTGCGCCATGAGAACGGAATCGAGGTgatcgcccgcatcggaacGAACGGAACTGAGCCGGATCCATTACAGTTTCAGCTCGCGAATGACTTCCGTTTGCTAGCCCCCGTGCTCGTCCGCACCCTTCGACGGGTGTTGAGTTTGAAGAAGGTTCCCGAAATTCTACAAGTGGACGAGAAGGGCAACTTCCTGCACGAACTGCAGTGGGATGTGCAAAACGAGTGGCAGATGCTTCGCGAGGCAGTGAGGAGTTTGCAAGGCGATGGAGTGGTACCGGTCAAACCACTTGAGCTCTATCCCAATAAGGCGCCGGAGGTGTATGCAGAGCCGATCGAAGCTGTTCCCGAGCATTTAAATGTGGAAAATACGGATGCTGATGTGGATGCAAATGATTGGGTAACTAACCCGATCGCAGGTGGTTATCATTGGGGTGATGCTAGAGGTTCTGCCGCAAGCCCTCAGGATGCTGAGAACCTTTCGTGGGAGATTGAGGAGCGCAGAACATCGCTGCTGCAACCAGAACCGCAGACACCGGTGGTAATCATTCAGCAATCTACAACGAAGATCTCCGAAGCACCTGCTCCTGTGCCAGTGAAACCGTTGCCCACTAAAGTACGTCCATTTCCAGTGCTTGTGAGTAGTCCACCTGCATCGTCGTTGGCGAATCAACTTTCGGTCGAGGTAGATCGAGTCACTCGGGAGCTTATCGCTGTGGAGCTGGATAAGTTCTTGCTGCGAGTGGAGGACCTGTCCGGTGTGGATGGATTTTCGAAAGAGTTTGATCGGTCGGACCGTGCCCGGATGGTTGGTTGGGTGAAGCAGTACTATTCTCCATCGCTGGGACTGGATCAGCGGGAGCTGCTTCGAGCGTTAAGACGATTACTAAAGACCAAACAGCTCCGTCGGGGTCGTCCGGACGTGTTGGAGGCGCTAGATTATCTACAGTCACAATTGGACATTGATCGAAGAGATGGGTTGGGTAACGAGTTCGTTCTAGACGAGGTCGTTGGTGGACCCTGCGGCTACCATGGCTCGTACACCTTTTTCAAGGGCCTCAAAATTACGTTCGGCACCAAAGGAACGCTCGAATCGGGCAGCAATTCCTCGTCGTCCGCCTCATCCGTAGCCAGCCTACCAGTGTCCTCCGCTGCACCGGGCAACGGAAGTGTTGGTGGCCCATCACCGCCCAGCACTGCCAACACTACCTCCACCGACAACGGCAGTAACAGTAATGGCCACGATCGGCGACGCCCTTCCGTCGACATTCCCAGCGAAGTCGGTggcacgaccaccaccaccaccaccaccgattcTCCTGATTCCTCCTCCACACCAGCAACTACCATCAAACGGCCATCGACGGGTGGTGAGGATGGCGATACAGCGGCGGAGGAACAGGATGAACGGATGAAGGACCGCAATGGCGGTCACACTGCCCAGTGCAATCAAACCAATGCCAACAGTAGTAGTGCGTCGTCGACGACCGGCGGCAGTAGTAGTGGAAATAATAATGGtagtagcaacagcagtaaTAGTAATAGCAATAGCAATAGTGATAGTAACGGTAACAACGGTAGCTCTAGTGCCAACGGTGGCAGCAGTGCAAAGAGTCAAAATGGCAACCATGCGAAGccaaaacaaacgcaacgaaAATGTGTCAGCGAAAATGGCGTCGGTGGTgcaggtggtggtgttggcggTAGTGTTGgtggcagtgttgccagcagCAACGGTACCAGCACCAGagccggcaacaacaacaacctctGCCGATTAACGTCGGTCGATCGAGAACAACACTACCGACCGCTGGTGCTGGCGCTGGGCGACTGCATTCCGGTCCGACCGTGGTCCGATTCGCCGATCGCCTGCCTCGCCGAGCTGCGGATGGTCTGGCGGGATCGGAACGAGCAGTGCCTGCTGATAGCCCTCCGGCTGTACTTTCTGCCGGAAAACACACCGATGGGCCGTAACTGTCACGGCGAGGACGAGGTGCTTGCGATCTCGGACAAGGTGATACTGCGGGCCGAGGATCTCCTGAACTGGATCGATACCGAGCAGGAATGGAGTTGGGGACTGCTAACGCTCTTCGACGAACACAGTGCCAAGGATTGCCTGGGGATGACGCGACATCTCAGCAAGAACTCGTCGCTCGACTTTGGCGATGTCGATAAGGAGAAGCATTCAGGTGAAAACATTGTATCCAAGGTGGCAGTCTTGAGCTTTTCACGATACTGTCGCTATCGGGCGCTACTGAAGCGTCTGGAAGGAGTTCAGGATGCTTGGCTACGGAATGCGCTGGTGGAAACGCTCGGAGGCTTTGTCGCACCCGTCCCCAACATGCGGATAATGTTCTGCAAAGAAACGTTCGACTATCCTGAGCTGGAGACGCACGAACTACTGTGCAATCATTTGGCGCCAAAGCTAAAGGGACGACCACGCGgcaaacggaagaaaactCTCTCCGACTCATCGCAGTACACGAAGAAGGAAGGCTGTTCGGACGAGAGCGAATCGAACGAATCGGACGTTTCGGACTATTCCTACAGCAAGGTATCTCCCGGCAAGAAGGTTATCGATCTCCATCCTACCCCACGCTACAATCCCCGACCTTCGCGAGGATCGTCCCAAACGAAGCAGGAACCGATCAGCGTGGTTATATCCGCCTCGGCAGGCACAGTCAAGCCAAGCACcgggaacaacaacaaccacctgTCCCAGCGCAATCGATCCAAATCCACGTCCAAAACGAAAACACCCAAGAAGTCGAAATCCTCGGCCACGAAAGCAGGTCGCAAGGCGGGCCGTGGAGGAGCCGGTGGCAAGAAATCATCCTCGTCGTCCTCCAACTCGTCGCTGgcagctgctggtggtggtggagaatCGGAGGACGATGAAGAGGAAGTGGATGAGGATGGAGAAGATGGTGGGTCTTCTTCGGCGCGCGGTGCATCGAAGGATCGCGATCGGGAGGATGATGCGGATGAGGACGAGGAAGAGATGGACTATGAGGAGGAtgaggaagaggaggacgaTAATCTGTTCCGGGTGAACGAGAGGATGAGCTCGGCCGAGCGCGAGTTCTTGCAGCGGTTGCAGGAATTCCTCGATCCAAGGGCGCTTCAGTATGCGGATAGTCAGGCTTCTTCGTTGAAGAATGTGAGTTTGTACGCGGTGTATGCCAAGGTGCAGAAGATCGGAGGCTACAGTGCGGTGACGGATAAGGAGGTGTGGAACCAGTTGCTCCAAGGAACGGGTGCCGAAAATGGAGTTCTCAGTCGACGGAAGTACGAGAAAATTATACTTCCGTTTGAGAAGCACTTACGCGAGCTGGCTGCCGATCAGGATACGGATCTGAAGCGAGAATCGACCCTGCTGTTGGTGGGAGACGATGAGCTGGAAAATAAGCTTCGGTTGCTGCGCGACGTGAAGTTGGAGAAGCGAGATCCGGACAGCAAATCACTTGCGCTGATGGAAAACAATGGAAACGCTGGGTTGGACTTTTCGGTTAAACGAGAGCTGGTGGAAAGGGATGAACTGTATGGGAAGAGCGGTCTTAAGGAGGACAGCAATGGATCCGGGGGAGGCAGTCCGAATGGTGGCGTGCATCTGGGAATGTCCCCGGTATCGGTTCCACTAACAGTTATCGTTCGCCCCAATCTGGATGAAAAGGATCAAAAGTCATCTCAGATACAGATCAAGCAGCCGCACACGACGATCACGGTACATCAAACAACGATCCATCCGCACAATGCCAATCACCATCACGCAAGCCAGCCAAATagcaatcatcatcagcatggGTCGTTGAGTGGACAGAGTCCGCAGCACATCACGAACCAGATACAGATCACGAATCAGATCCAGATCCAGCAGATAACAGTGCAATCGAATGATAAAAACGGATCTGGCGGTGTGCCAGGATCCGGTGCCGGAAGTCCGAATGAATCTGGGGGACAGTTCAAGTATAGCTTCAAGCAGGACAAATCGGGCCAGGAGCTTAACATTGAGCCGGCTGCAACGACACCTAAATCCGCTTCGACGACGATCGCGTCAGGAGCAGGATCACCGTCGGAAGGTGCATCTTCACTGAGTCTGTTCCCGCTGAATCGACAGGGCACGGATCCGGATCTAACGATAAAGGAAGTTTCGGTGTGTCCAACCAGCGGAACGCTATCGATTACGTCCAGTGCTTGTGTGCCGACAACACCCTCGAAGACCAGTTCCCTGAGGCACGTCCGAATGAAGAACGATCGGAAGGGAAGTGGGTCTGGTGGAGGGATGCTCATGGACGCGGGCGGGTTTATGGGTGCTAGTCAGAAGGAGAATATTCCACTGCTTGGCGGTGGAGTTGGATCGGCGAGTCTGTTCGGTGGTCAAAGTCTAACCACAATCACTCCGATCCCGGCTAACATGATGATGGCGGGAGCGTTCCTTGGAGGCGGAGCTGGTGCTCTCGCAGGTGGCGGACGAACATCAATGGATATGGAACACTCGGGTAAGCAGCAATCAGCAACGCCAGCCGCAACGGAAGTAATCGACCTTGTTGATAGTGACAATGAATGCGAAAGTTCTCCATCGGGTCCTGCAGGATCGTCATCCGCGAACCGTAAACAAGCAGGTCAAGCCATGCGTCCGATTCCCTCGCTATTGCCACCGATGAAGAAGCGCAAGTTGGATATTCTACGCGAAGGTGGCCTCGAAGTGACACCGATTTCAAACGGAGCAAGTATCTTCTCGAGTCTCGGTAAAAGCACGGGACCGCCCAATCCGATGCGTATTAATATAACGGCTGAACTGAACACGACACCGCCACGGCCCGAGGCCTCAACGAAGCGTAACGATCAGCAGCCGCGCAAATGCATTCCGACTCCACTCGAGTTCCAGACGCACTGTATGTACACACGCACGGGGAAGATTTTCGGCGATCCGAAAGAGCTGGTTCGTCCGAGAGCACCCGTCCCGGCACCGGATCTTCTCGATCTAACAGGCCGCATGGGCATGATGGCGGGCGTAGACAGTGTGGCGAATCTTTCCAACAAAAGTCAACTACCCGGAATGGATTTCTCTTCTTCCGGTGGTAACATGCGGCAGAATAATCGTACAGGACCTGCCTCTCGGACGGCTCCAAGCTTGCAGATAACGCTCGTTCCCGGTCCGTCCACCAATCACAGCTCTGGTGGTGCTCCAGGTCTTCCGCCAATGATGACGCCGCTCAATATTCCCGTTCCGGTGCCAAGTCAGCAGACGGCGGCAGCGTCGGCATCGTCCGCGTCGTCCAATTCGATGATGGGACACAAGAAATCGAAAGCGTATGAAATTGTGCCATTACGAGACGGTCCTGCAGCACCAATGAAGGAGCCCAGTCCCAAGGTCACTATTGGCCCGTCCTCagcgtcctcctcctcgtccagTTCCACCAACGGTACAACCATTCCGCCGCCTCCACCTCCCTCGTCCTCCGCCGCTCAGCTGGGCCTGCTGGGTACGGGAGCATCTCCAAACAGTCTGCtcgaaacgctggccaacctGCAGAAAGTGAACCCGGTCCTGATGGCCAGCATACTTTCCTCGTCCGGCATCTCAAAGTCGTCCATTCCGGGGCTGACGCAGCTGCTCGGCACGCTCGCCGATCAATCCCCACTCGCACCACCAACGACGAAGAAGACGCAGCGAAGACGATCCAACTCACAGGCcgcggcggcagcggcagcagcagcagcagcagcagcggccagTTCTGTCCCAAATGCGCCATCACCAAGCATTCCCGGCAGTTTACCCCCTTCGGGAGCACCTTCCGGTCCGCCGCCAAACATTGTCTCCTCTATGCCTCCATTCCCGATGCCACCGGGCAGCTTAGGAATGGTTCCGCCCTCGGTGTTACAATCAAACTCGCCCTCTCCGCAACATCATCCTCCGCAAGCCGATTCACCCACCTCCGCCAACCATCCCCTAAGCCAGCAGATCAAGCTACTCCAACAAGTtcagctccagcagcagcaaaagttcTTCCAACAGAAAGCCTCCGAAGAACAGCAGAAGCTGCAAATGTATCAACAATTTTcccagaagcagcagcagcagcagcagcagcaatcctccCCAAGCCAAGGCTCACCCGTGTCCCCCGTGTCTACCGTCGGAGCAGGCTCCCCGTTGCCCGGGACTCCTCCGCTCGCAATGCCACCCTCACCGGTCACCGTGCCCCGCATTCCAGTCGTGCCACCGACACTCTCGGGACTTCCGCCTGGAGCCGGTGCCGCCTTTCCACCTCCGTTCGATCCGATCTATCTGCAGCTGTACGCAAACCCGGGCCTCTACCTGCAGAGCCTGCCGCCGGAACAGTTGCTGCAGCTGTACAAAAACCTTCCGCAGGGCATTCCAATCACCAAGAGCTAG
Protein Sequence
MRTSSSILCVILWCTLLYICSPVGSTTPSTRHNRDLEAALLDLFEPNDLQIDDADSGRIFAQKREEKRVLKELYYLAKVLKAFRLPHAYGSTVFKSVIDRVTNKELLDQLERKLRHENGIEVIARIGTNGTEPDPLQFQLANDFRLLAPVLVRTLRRVLSLKKVPEILQVDEKGNFLHELQWDVQNEWQMLREAVRSLQGDGVVPVKPLELYPNKAPEVYAEPIEAVPEHLNVENTDADVDANDWVTNPIAGGYHWGDARGSAASPQDAENLSWEIEERRTSLLQPEPQTPVVIIQQSTTKISEAPAPVPVKPLPTKVRPFPVLVSSPPASSLANQLSVEVDRVTRELIAVELDKFLLRVEDLSGVDGFSKEFDRSDRARMVGWVKQYYSPSLGLDQRELLRALRRLLKTKQLRRGRPDVLEALDYLQSQLDIDRRDGLGNEFVLDEVVGGPCGYHGSYTFFKGLKITFGTKGTLESGSNSSSSASSVASLPVSSAAPGNGSVGGPSPPSTANTTSTDNGSNSNGHDRRRPSVDIPSEVGGTTTTTTTTDSPDSSSTPATTIKRPSTGGEDGDTAAEEQDERMKDRNGGHTAQCNQTNANSSSASSTTGGSSSGNNNGSSNSSNSNSNSNSDSNGNNGSSSANGGSSAKSQNGNHAKPKQTQRKCVSENGVGGAGGGVGGSVGGSVASSNGTSTRAGNNNNLCRLTSVDREQHYRPLVLALGDCIPVRPWSDSPIACLAELRMVWRDRNEQCLLIALRLYFLPENTPMGRNCHGEDEVLAISDKVILRAEDLLNWIDTEQEWSWGLLTLFDEHSAKDCLGMTRHLSKNSSLDFGDVDKEKHSGENIVSKVAVLSFSRYCRYRALLKRLEGVQDAWLRNALVETLGGFVAPVPNMRIMFCKETFDYPELETHELLCNHLAPKLKGRPRGKRKKTLSDSSQYTKKEGCSDESESNESDVSDYSYSKVSPGKKVIDLHPTPRYNPRPSRGSSQTKQEPISVVISASAGTVKPSTGNNNNHLSQRNRSKSTSKTKTPKKSKSSATKAGRKAGRGGAGGKKSSSSSSNSSLAAAGGGGESEDDEEEVDEDGEDGGSSSARGASKDRDREDDADEDEEEMDYEEDEEEEDDNLFRVNERMSSAEREFLQRLQEFLDPRALQYADSQASSLKNVSLYAVYAKVQKIGGYSAVTDKEVWNQLLQGTGAENGVLSRRKYEKIILPFEKHLRELAADQDTDLKRESTLLLVGDDELENKLRLLRDVKLEKRDPDSKSLALMENNGNAGLDFSVKRELVERDELYGKSGLKEDSNGSGGGSPNGGVHLGMSPVSVPLTVIVRPNLDEKDQKSSQIQIKQPHTTITVHQTTIHPHNANHHHASQPNSNHHQHGSLSGQSPQHITNQIQITNQIQIQQITVQSNDKNGSGGVPGSGAGSPNESGGQFKYSFKQDKSGQELNIEPAATTPKSASTTIASGAGSPSEGASSLSLFPLNRQGTDPDLTIKEVSVCPTSGTLSITSSACVPTTPSKTSSLRHVRMKNDRKGSGSGGGMLMDAGGFMGASQKENIPLLGGGVGSASLFGGQSLTTITPIPANMMMAGAFLGGGAGALAGGGRTSMDMEHSGKQQSATPAATEVIDLVDSDNECESSPSGPAGSSSANRKQAGQAMRPIPSLLPPMKKRKLDILREGGLEVTPISNGASIFSSLGKSTGPPNPMRINITAELNTTPPRPEASTKRNDQQPRKCIPTPLEFQTHCMYTRTGKIFGDPKELVRPRAPVPAPDLLDLTGRMGMMAGVDSVANLSNKSQLPGMDFSSSGGNMRQNNRTGPASRTAPSLQITLVPGPSTNHSSGGAPGLPPMMTPLNIPVPVPSQQTAAASASSASSNSMMGHKKSKAYEIVPLRDGPAAPMKEPSPKVTIGPSSASSSSSSSTNGTTIPPPPPPSSSAAQLGLLGTGASPNSLLETLANLQKVNPVLMASILSSSGISKSSIPGLTQLLGTLADQSPLAPPTTKKTQRRRSNSQAAAAAAAAAAAAAASSVPNAPSPSIPGSLPPSGAPSGPPPNIVSSMPPFPMPPGSLGMVPPSVLQSNSPSPQHHPPQADSPTSANHPLSQQIKLLQQVQLQQQQKFFQQKASEEQQKLQMYQQFSQKQQQQQQQQSSPSQGSPVSPVSTVGAGSPLPGTPPLAMPPSPVTVPRIPVVPPTLSGLPPGAGAAFPPPFDPIYLQLYANPGLYLQSLPPEQLLQLYKNLPQGIPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00103472;
90% Identity
iTF_00103472;
80% Identity
-