Basic Information

Gene Symbol
ARID5B
Assembly
GCA_943734865.1
Location
CALSEK010000102.1:1354713-1380304[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-12 2.8e-09 37.1 0.1 2 89 1153 1233 1152 1233 0.89

Sequence Information

Coding Sequence
ATGAAGATACCTTCGTGCATCTTGCATGCTATTATTTGGAGCAGTTTGTTCTACACTTCCTCGCCGGTAGAAACCACTGCTGCATCAACTCGTCACAGCCGGGACCTGGAAGAAGCGCTTCTAGATTTATTCGAACCAAATGAACTTGACGAATCGCACAATGCTGACAGTGGTCGCATATTAGCCCAGAAGCGTGAAGAGAAGCGCGTCCTGAAGGAATTGTTCTATCTAGCGAAAGTGCTTCAAGCTTACCGACTTCCGCATGCCTACGGAAGCAACGTGTTCAAGCGTGTCATCGATCGGGTTACGAACAAGGAGCTTCTCGAACAGCTGGAACGAAAACTGCGCCATGAGAGCGGCATCGAAGTGATCGCCCGCATCGGAACGAACGGAACTGAGCCGGATCCATTACAGTTTCAGCTTGCGAATGATTTCCGTTTGCTCGCACCCGTTCTCGTTCGCACCCTTCGACGGGTGTTAAGTTTGAAGCATGTTCCAGAAATTCTGCAAGTCGACGAGAAGAGTAACTTCCTGTACGAACTGCAGTGGGATGTGCAAAACGAGTGGCAGACGCTACGTGAGACTGTGAAGAGCTTGCAGGAAGGGGGAGTGGGACAGGTCAAACCACTTGAGTTCCATCCCAGTAAGGCGCCCGTGATGTATGAAGAACCGATTGATGTTGTTCCCGAGGAGTTAAGCGTCGAACATACAGATTCCGGTATGGATGGCAATGATTGGGTAACTAATCCAATCGCAGGTGGTTATGTATGGGGCAATGCTAGAGGTGCTGCTGCAAGCAGTCAAGCTGACGTTGAAAACCTTTCATGGGAGGTAGAGGAGCGCAGATCAGTGGTACGGCACCCAGAACCTCAGACTCCGGTGGTAATAATTCAGCAATCTACAACGAAGATCTCCGAAGCACCTGCTCCTGTGCCAGTGAAACCGTTGCCGAGTAAAGTTCGTCCGTTTCCAGTGCTTGTGAGTGGTCCACCTGCATCGTCGTTGGCCGCTCAACTTTCGACGGAGGTAGATCGAGTAACCAGGGAGCTTATCGCTGTTGAGCTGGATAAGTTCTTGCTGCGTGTGGAGGACCTATCCGGTGTGGATGGCTTTTCGAAAGAGTTTGACCGATCGGACCGTGCCCGGATGGTTGGTTGGGTGAAGCAGTTCTATTCTCCATCGGTGGGACTGGATCAGCGAGAGTTTCTTCGGGCGTTACGACGATTGCTAAAGACTAAACAGCTTCGTCGGGGTCGACCGGACGTGTTGGAGGCGTTAGACTATCTACAGTCACAGTTAGACATTGATCGAAGAGAAGGTTTGGGCGATGAGTTCTACCTAGACGAGGTCGTTGGTGGACCCTGCGGCTACCATGGCTCGTACACCTTTTTCAAGGGTCTCAAAATTACGTTCGGCGCGAAAGGATCGCTCGAATCGGGCATTAGTTCCTCGTCGTCGGCTTCGTCTGTGGCCAGCCTACCAGTGTCCTCCGCTGCTGCTCCGAGCAGCGGAAGTGTTGGTGGCCCATCACCACCCAACACTGCCACCCCTACCTCCACCGACAACAACAGTAACGGGCACGATCGGCGGCGCCCTTCTGTCGACATTCCCAGCGAAGTCGGTGGCACCACCAAAACCACCGCCGGCCCACCTGAACCCTCCTCCTCCTCCTCCGCCTCACCATCAACTACCATCAAGCGGCCATCGACGGGTGGTGAAGATGGTGGTGATACACCGGGGGAGGAACAGGATGAACGGATGAAGGATCGTAATGGCGATCACACTGCCCAGTGCAATCAAACCAATGCcaacagtagtagtgcgtcgtcgacaaccggcggcagtagtagtggaaatactagtggtaatagtaacagcagtaatagtaatagcaatagcaatagtgatagtaacggtaacaacggtagctctagtgccaacggtggcaacagtggaaagagtcaaaatggcaaccatgcgaagccaaaacaaacgcaacgaaaatgtgtcagcgaaaatggcgtcagtggagtagttggtggtggtggtggtggtggtggtggtggtggtggcggcagcggaggtagtgttggtggcagtgttgccagcagcaacggtaccagcaccagagccggtatcaacaacaacCTATGCCGATTAACGTCGGTCGATCGAGAGCAACACTACCGTCCACTGGTGCTGGCGCTGGGCGACTGCATTCCGGTCCGACCGTGGTCCGATTCACCGATCGCCTGCCTGGCCGAGCTGCGTATGGTCTGGCGGGATCGGAACGAGCAGTGCCTGCTGATAGCCCTCCGGCTGTACTTTCTGCCGGAGAATACACCGATGGGCCGCAACTGTCACGGCGAGGACGAGGTGCTTGCGATCTCGGACAAGGTGATACTGCGGGCCGAAGATCTCCTGAACTGGATCGATACCGAGCAGGAATGGAGCTGGGGCCTGCTAACGCTGTACGACGAACACAGTGCCAAGGATTGCCTGGGGATGACGCGACATCTCAGCAAAAACTCATCGCTCGATTTTGGCGATGTTGATAAGGAGAAGCATTCAGGTGAAAACATTGTATCCAAAGTGGCAGTCTTGAGCTTTTCACGATACTGTCGCTATCGAGCGCTGCTAAAACGTCTCGAAGGTGTACAGGATGCGTGGCTACGAAATGCGCTGGTGGAAACGCTCGGAGGCTTTGTCGCACCCGTCCCCAACATGCGGATAATGTTCTGTAAAGAAACGTTCGACTATCCTGAGCTGGAAACACACGAGCTACTGTGCAATCATTTGGCGCCAAAGCTAAAAGGACGACCACGCGGAAAGCGGAAGAAAACTCTCTCCGACTCGTCGCAGTATACGAAGAAGGAGGGCTGTTCGGACGAGAGCGATTCAAACGAATCGGATGTTTCGGATTATTCCTACAGCAAGGTATCTCCCGGTAAGAAAGTTATCGATCTCCATCCTACCCCACGCTACAATCCCCGACCGTCTCGAGGATCGTCCCAAACAAAGCAGGAACCGATCAGCGTGGTTATATCCGCCTCGGCCGGCACAGTCAAACCAAGCACGGGAAACAACAACAACCATCTGTCCCAGCGCAATCGGTCCAAATCCACGTCGAAAACGAAAACCTCCAAGAAGTCAAAATCGTCGGCCACGAAAGCGGCTCGCAAGGTGGGTCGCCCAGGAGGCGGTGGTAAAAAATCGTCTTCATCGTCCTCCAACTCATCCCTGGCAGCTGCTGGAGGTGGTGGAGAATCGGAGGACGATGAAGAGGAAGTGGATGAGGATGGTGAAGATGGTGGGTCTTCGTCGGCCCGCGGTGCTTCGAAGGATCGTGATCGGGAGGATGATGCTGATGAAGATGAGGAAGAGATGGACTATGAGGATGACGAGGAAGAGGAGGATGATAATCTGTTCCGGGTGAATGAGAGGATGAATTCTGCCGAGCGAGAGTTCTTGCAGCGATTGCAGGAATTCCTCGATCCACGAGCGCTTCAGTATGCGGATAGTCAGGCTTCTTCGCTGAAGAATGTGAGTTTATACGCGGTATACGCCAAGGTACAGAAGATCGGTGGCTACAGTGCGGTGACGGATAAGGAGGTGTGGAATCAGCTGCTTCAAGGAACGGGTGCCGAGAATGGTGTACTTAGTCGACGGAAGTACGAGAAGATTATACTTCCGTTTGAGAAACATTTACGCGAACTGGCTGCTGACCAGGATTCGGAGCTGAAGCGAGAATCGACCCTACTGTTGGTGGGAGACGATGAGCTGGAAGCTAAACTTCGGTTGCTGCGCGACGTGAAGTTGGAGAAGCGTGATCCTGATCCGGACAGCAAATCGCTTGCGCAGATGGAAAAGAATGGAAACACTGGATTGGATTATTCGGTTAAACGGGAACTGGTGGAAAAGGATGAACTTTACGGGAAAGGTGCACTTAAAGAGGACAGCAATGGTTCCGGTGGAGGCAGTCCTAACGGTGGCGTACATCTGGGAATGTCCCCTGTATCGGTCCCACTAACAGTTATCGTACGTCCCAATTTGGACGAAAAGGATCAAAAGTCCTCTCAGATACAGATCAAGCAACCGCACACGACGATCACGGTACATCAAACAACGATCCATCCGCACAATGCCAATCACCATCACGCAAATCAGCCAAATAGCAATCACCATCAGCATGGATCGATGAGTAGCCAGAGTCCGCAGCACATTACCAACCAGATACAGATCACGAATCAGATCCAAATCCAGCAGATCACAGTGCAATCGAATGATAAGAATGGTTCGGGTGGCATGGCAGGATCTGGGGCTGGAAGTCCGAATGAATCTGCGGGACAGTTCAAGTATAGTTTCAAACAGGACAAATCAGGCCAAGAACTCAACATCGAACCGGCTGCGACGACACCGAAATCCACTTCAACGACGATTGCCTCTGGGGCTGGATCACCGTCGAAGGGTGCTCCATCGCTAAGTCTATTCCCGCTCAACCGACAAGGAACGGATCCAGATCTAACCATAAAGGAAGTTTCAGTGTGCCCAACAAGTGGAACGTTATCGATTACGTCCAGTGCTTGTGTGCCGACAACACCCTCGAAGACGAGTTCGCTGAGGCATGTGCGAATGAAGAACGATAGAAAAGGAAGTGGCTCCGGTGGAGGAATGCTGATGGACGCTGGTGGGTTTATGGGTGCTAGTCAGAAGGAGAACATCCCATTGCTTGGTGGTGGCGTCGGTTCGGCAAGTCTGTTCGGTGGTCAGAGTCTAACCACAATTACACCGATCCCTGCTAACATGATGATGGCAGGAGCGTTCCTTGGAGGAGGAGGTAGCCTAGCAGGAGGAGGAAGACCTTCAATGGACATGGATCACTCGTCCGGTAAGCAGCAATCAGCTACTCCAGCTGCAACGGAAGTGATCGATCTTGTTGATAGTGATAACGAAAGCGAAGCAGGATCATCCTCTGCGAATCGCAAACAAGCCGGTCAAGCCATGCGACCGATTCCTTCGCTACTGCCACCGATGAAGAAGCGCAAGTTGGACATTCTTCGCGAGGGCGGCCTCGAAGTGACACCGATCTCAAACGGAGCAAGTATCTTCTCGAGTCTCGGAAAAAGCACGGGACCGCCCAATCCGATGCGTATTAATATAACGGCTGAACTGAACACGACTCCTCCACGGCCCGAAGCCGTATCGAAACGGAACGATCAGCAGCCACGCAAATGCATTCCGACTCCTCTCGAGTTCCAGACGCACTGTATGTACACACGCACCGGGAAGATATTCGGCGATCCGAAGGAGCTGGTTCCTTCGAGAGCTCCCGTGCCTGCACCGGATCTTCTCGATCTAACTGGCCGCATGGGTATGATGGTAGGCGTCGATAGTGTGGCGAATCTTTCCAACAAAAGTCAGCTCCCTGGGATGGATTTCTCTTCTTCCGGTGGGAATATGCGTCAGAATAATCGTACAGGACCAGCCTCCCGCACAGCACCGAGCTTGCAGATAACGCTAGTGCCCGGTCCGTCGAACAACCACAACACTGGTGGTGGACCTTCAAGTCTTCCACCAATGATGACACCACTGAACATTCCCGTTCCGGTGCCAAGTCAACAATCGGTGGCAGCGTCGGCATCTTCCACCCCGTCCAATTCGATGATGGGACACAAGAAATCGAAAGCGTACGAAATTGTGCCATTAAGAGATGGTGTTACTGCACCAATGAAGGAACCAAGTCCCAAGGTTACTATCGGTCCTTCTTCTGCGTCCTCATCCTCGTCCGGCTCCACCAACGGTACAATCATTCCACCACCTCCACCCCCCTCGGCCTCCGCCGCTCAGCTAGGATTGATGGGTGCGGGATCTTCTACCAACAACTTCCTCGAAACACTTGCCAACCTGCAGAAGGTGAACCCGGTCCTGATGGCTAGCATACTATCCTCTTCCGGCATCTCAAAGTCATCCATTCCGGGGCTGACGCAGCTTCTCGGTACACTTGCCGATCAATCGCCACTCGCACCGCCAGCGACGAAGAAGACGCAACGAAGACGTTCCAACTCACAGGCAGCGGCGGCAGCAGCAGCAGCAGCGGCTGCAGTCAGTTCAGTCCCGAATGCGCCATCACCCAGCATCCCTGGCAGTTTACCACCAGCGGGTGCTCCTCCTGGTCAAGCGCCAAATTTTGTCCCCTCCATGCCACCGTTTCCGATGCCACCGGCCAGCTTAGGAATGGTGCCACCATCGGTGTTACAATCCAACTCACCCTCTCCGCAACATCATCCTCCGCAGGCTGATTCACCAACCTCCGCGAATCATCCGCTCAGCCAACAGATCAAGCTACTCCAGCAAGTTCAGCTCCAACAGCAGCAAAAGTTCTTCCAACAGAAAGCCTCCGAAGAACATCAGAAGCTGCAAATGTACCAACAGTTCTCGCAGAAGCAACAGCAACAATCCTCCCCAAGTCAAGGCTCACCCGTGTCCCCTGTGTCTACCGTCGGAGCAGGCTCCCCATTGCCGGGCACACCTCCACTCGCAATGCCACCCTCTCCGGTCACGGTTCCCCGTATTCCGGTTGTACCACCTGCAGCAGCCGCAGTACTGTCTGGACTGCCGCCTGGAGCTGGTGCTACATTCCCTCCTCCGTTCGATCCGATCTACCTGCAGCTGTACGCAAACCCGGGACTATACCTGCAAAGCTTGCCGCCAGAACAGTTGCTGCAGCTGTACAAAAACCTTCCGCAGGGCATTCCAATCACCAAGAGCTAG
Protein Sequence
MKIPSCILHAIIWSSLFYTSSPVETTAASTRHSRDLEEALLDLFEPNELDESHNADSGRILAQKREEKRVLKELFYLAKVLQAYRLPHAYGSNVFKRVIDRVTNKELLEQLERKLRHESGIEVIARIGTNGTEPDPLQFQLANDFRLLAPVLVRTLRRVLSLKHVPEILQVDEKSNFLYELQWDVQNEWQTLRETVKSLQEGGVGQVKPLEFHPSKAPVMYEEPIDVVPEELSVEHTDSGMDGNDWVTNPIAGGYVWGNARGAAASSQADVENLSWEVEERRSVVRHPEPQTPVVIIQQSTTKISEAPAPVPVKPLPSKVRPFPVLVSGPPASSLAAQLSTEVDRVTRELIAVELDKFLLRVEDLSGVDGFSKEFDRSDRARMVGWVKQFYSPSVGLDQREFLRALRRLLKTKQLRRGRPDVLEALDYLQSQLDIDRREGLGDEFYLDEVVGGPCGYHGSYTFFKGLKITFGAKGSLESGISSSSSASSVASLPVSSAAAPSSGSVGGPSPPNTATPTSTDNNSNGHDRRRPSVDIPSEVGGTTKTTAGPPEPSSSSSASPSTTIKRPSTGGEDGGDTPGEEQDERMKDRNGDHTAQCNQTNANSSSASSTTGGSSSGNTSGNSNSSNSNSNSNSDSNGNNGSSSANGGNSGKSQNGNHAKPKQTQRKCVSENGVSGVVGGGGGGGGGGGGGSGGSVGGSVASSNGTSTRAGINNNLCRLTSVDREQHYRPLVLALGDCIPVRPWSDSPIACLAELRMVWRDRNEQCLLIALRLYFLPENTPMGRNCHGEDEVLAISDKVILRAEDLLNWIDTEQEWSWGLLTLYDEHSAKDCLGMTRHLSKNSSLDFGDVDKEKHSGENIVSKVAVLSFSRYCRYRALLKRLEGVQDAWLRNALVETLGGFVAPVPNMRIMFCKETFDYPELETHELLCNHLAPKLKGRPRGKRKKTLSDSSQYTKKEGCSDESDSNESDVSDYSYSKVSPGKKVIDLHPTPRYNPRPSRGSSQTKQEPISVVISASAGTVKPSTGNNNNHLSQRNRSKSTSKTKTSKKSKSSATKAARKVGRPGGGGKKSSSSSSNSSLAAAGGGGESEDDEEEVDEDGEDGGSSSARGASKDRDREDDADEDEEEMDYEDDEEEEDDNLFRVNERMNSAEREFLQRLQEFLDPRALQYADSQASSLKNVSLYAVYAKVQKIGGYSAVTDKEVWNQLLQGTGAENGVLSRRKYEKIILPFEKHLRELAADQDSELKRESTLLLVGDDELEAKLRLLRDVKLEKRDPDPDSKSLAQMEKNGNTGLDYSVKRELVEKDELYGKGALKEDSNGSGGGSPNGGVHLGMSPVSVPLTVIVRPNLDEKDQKSSQIQIKQPHTTITVHQTTIHPHNANHHHANQPNSNHHQHGSMSSQSPQHITNQIQITNQIQIQQITVQSNDKNGSGGMAGSGAGSPNESAGQFKYSFKQDKSGQELNIEPAATTPKSTSTTIASGAGSPSKGAPSLSLFPLNRQGTDPDLTIKEVSVCPTSGTLSITSSACVPTTPSKTSSLRHVRMKNDRKGSGSGGGMLMDAGGFMGASQKENIPLLGGGVGSASLFGGQSLTTITPIPANMMMAGAFLGGGGSLAGGGRPSMDMDHSSGKQQSATPAATEVIDLVDSDNESEAGSSSANRKQAGQAMRPIPSLLPPMKKRKLDILREGGLEVTPISNGASIFSSLGKSTGPPNPMRINITAELNTTPPRPEAVSKRNDQQPRKCIPTPLEFQTHCMYTRTGKIFGDPKELVPSRAPVPAPDLLDLTGRMGMMVGVDSVANLSNKSQLPGMDFSSSGGNMRQNNRTGPASRTAPSLQITLVPGPSNNHNTGGGPSSLPPMMTPLNIPVPVPSQQSVAASASSTPSNSMMGHKKSKAYEIVPLRDGVTAPMKEPSPKVTIGPSSASSSSSGSTNGTIIPPPPPPSASAAQLGLMGAGSSTNNFLETLANLQKVNPVLMASILSSSGISKSSIPGLTQLLGTLADQSPLAPPATKKTQRRRSNSQAAAAAAAAAAAVSSVPNAPSPSIPGSLPPAGAPPGQAPNFVPSMPPFPMPPASLGMVPPSVLQSNSPSPQHHPPQADSPTSANHPLSQQIKLLQQVQLQQQQKFFQQKASEEHQKLQMYQQFSQKQQQQSSPSQGSPVSPVSTVGAGSPLPGTPPLAMPPSPVTVPRIPVVPPAAAAVLSGLPPGAGATFPPPFDPIYLQLYANPGLYLQSLPPEQLLQLYKNLPQGIPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00108168;
90% Identity
iTF_00108168;
80% Identity
-