Basic Information

Gene Symbol
ARID2
Assembly
GCA_013141755.1
Location
CM023249.1:6972238-6981539[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-24 2.1e-20 72.7 0.0 2 89 77 162 76 162 0.93

Sequence Information

Coding Sequence
ATGACGACCGATGTAGTGAAAATAGAACGGACAAACCTGCCGCCCATGGCGGTGGACGAGACGACGAACGATGCGAGCATGGCTAGCTGCAACAGCGTCGTCAGCGGAGGACAGCCTGCCGGTGCTGGTGGCGGGGCCGCCGCCGGAAACACTGCCGGAACGCCGAAAGAATCGGCCAAATCGCAAAACCTACGGCGGTCTGTTGCAAAGCCAACGTTCGAGAAGGATAAGTACAGCTTTCTGAACGATCTGCAGATGTTCCATGGGAAGCACGGCACACCGTATCTGAAGCTGCCCAAGATCAGTGGAAAGGAAGTCGATTTGCACAAGCTCTACTCGATCGTTATTGGTAGAGGCGGTTGGATGAAGGTAAATGCCCGTGAGGATTGGTGCGAGGTAATAGAAGAGCTGGACCTACCGACCCGTTGCGTAAACAGTGAAATCGCTCTCAAGCAAATCTACATCCGCTACTTGGATCGATACGAACGGGTCAACTTCCACGGCGAGGATAAAGATCCGGTcgaggacgatgatgacgagaAGCGACTGCACCGACGGTGGTCCGTCCGCATGCTGCACTCCACACCGTCCGTGtacaaccatcaccagcacaATGTGCCGGAGGGCATGCGCTCGTCGCTGAAACTTTCGGACGATCTGTACCGTGCGTCCGAGTACGATAAGCTGATCCTGTCGCTACTGTCCCCTTTACCGAACGAGCAGGATTTCGCCATTAATGTGTGCACGCTTATGTCGAACGAAAACAAGCACACGCTGAAGGTGGACAAGTGTCCGCGGCTGGTGTACGCGCTGCTGGCCCATGCCGGAGTTTTCAACCACTTTTCGCTGCGGGACACATTCGACGAGTACTATTCCAACATTCGGAAGAACTCGCTGCAACGCTTCTGGAAGGAGTGTCTGTTCGAAAAGCCGCAAGTGTTGGAACTGTCGCTGGAAGATTGCTTCGCCAAGATGGGCACCGATCCCAGCGCACTGATCGCATCCATCTATCAGGAGGAGCCGGAAGAGATGGACACTAAATCGGGCAATGAAAATGAAGACGAAAAGGAGAGTGATTTCGAGATCATGAGCGGACGGTTGAATACGGCATCGCTTCGCACGTTTCTCAGCCTTGGGACGGGGCTCGGTACGAACGATTACATTGGACAGCGCGTGTTGCAGATCGCTTCCATCTTTCGCAATCTAAGCTTCAACGAGGAAAATCTACAGCTACTGGGCCGCAACCGTACCTTCATTCGCTTTCTCATCATGTGCGCAAATGCGCGATGGAACAACCTGCACCACCTTGGGCTGGACATGCTCGGGAACATCGCGAACGAAATCGATATCAATGATCCGCAGTCGGACGAAGTGACGCGGTGCCTTGTGTCGACGCTGTCCGAAGGGCTGGAAGGTGCCGATCGGGGTGTTATCATAAGCTGCCTGGAGGTGCTGAGTAAGATCGCCCAGAAAGAGTCGAACGAAGAAAATCTCAACCGGTGTCTCAACCAGCAGCTGTACGATCAGATCAGCTTGTTCCTGTGTTTGAACGAtatcatgctgctgctgtacacgCTGGAATGTATCTACTCGCTCACCTCGATGGGCGAGAAACCCTGCAATGCCATCATGCACATCCGGGGTGTGATCGATACGCTCGTTTCGTTGGTGACGGTGGAAGCACAGAGCTACGGTCCGGATGCGTGCATTCTGATGCGTGTGGTTGAAACCATCCCGGGAAACATGGCCACACATCATGCGCAAGGCGCTTACTTTCAAAATGGCCAGATGGGCCAACCGAATCCTCCGCCAACGATGACGCAGCTGACCGTACACAAGGATGCAGCTGGTGGGCAGATAAATGCCAATCCGCACGCTGTATATCCCACTCCCGAGGTACCAAAGCTTCCTTCTTTGACCATCACGAGCAAACCAGTGCCATCCTCCCCGCCAGTCGTCCAGCCAGCTCAGCAACAGATGGTTCAGCCGGCGGCTCCACAACCCGCAGTGCAGCAGAATCAAACCGCCGTCGCTGCCAATAATCCCCAGATCGTAAGCGTTACACGTCCCCCCGCTGCCGATTCGCCACAGATTCCCGTGAATGTAATTGCTCGTGCCGATCCGTCATTGACCGTAACGCACGGCACGGTTGCGAATCAGCAGACAGCAGCGGCAACAAACACGCCCGCCCAACCGGGACACCCGGGTCACGCGCAACAAACCATTACACCCGGCGGGGTTGTTATTCAAAGTCCTGCCGCTGCACCGTCGTCGATTGCGGCCAAacacatccagcagcagcaagcgcaGGAAAGTGAACAGTTTGCCTATGCTTGGTTGCGGGCATCGTTCGAAGCAGCACCGGCCGTTCGTATCGAGCAGCAGGAGCTGTACAAGCTGTATCTGGCGACGAACGGAAAGCTGGGCCGTAAAGTGATTGTGCCGCTGTCACACTTTCCACGGTGTGTGCGCGCCGTGTTTGGTGGGACCGTCGGTCCGGTGCAGTTGAAGATGGAGCAGAATGGCGTTGAAACGATCGGGTACTACTACGAGGGTTTAAGGATGCGCCCCAAGCCATTGCCGATCGTGCACAAAGGGACAGTGGTGACACCGGCCGTAGACTGTACATCGACCAGTCGACCAGGCactagtagtaatagtagtaacCCCGTTACGCCGGCAAAGCACGACGAGCCAAGCCATAGTAAaataaccaccaccaccaccagttgTACTGCTGCGAGCACCACCCTTTCAACGCACAGCGCAACGTTCGTCGGTCGGGAGATGAGCTCCACCAGCACAGCCATCACAGccagcaaagcaaacacagTCGCAAGTAATGTGGGAACTACCTCCGGACGATGCACAGTTACGACGGCCCACGACGGCGGTCGCTTGCCGGACGTTACCCCGTTACCATCACAGGGAACGCTTCGTTCGTCGTCGGTTATAGCGATGGCaccaccgagcagcagcagctctgcCAATCCCATTACAGCACCACACACGGCACAGTCCGTGCCCGTGCTGCACAAAACGATACCGCTGCAGACGGTCAAATGTTCACCGCAACCAGTACAACCGAAAGCAATCTTGCACTTCTCCCAAGCTCAATCGGCCCCAAGCGTGGGAAGCACGGCAACGTCGGCGGGAGTATCTGCAACGATCGGCAAACAGATCATTGTCACACAGATGGGTGGCAAAAGTGTCGTTATCAATAAAGCTACGACCGGCcaacagcaccagtaCATACCGACCACACCGTCGTCTCCGCTGCTCCAGCAGGTGCTAAGCAGCGATCAGAAGAACAACGTGATTGTGGTAAATCAGACGACCATCTCGCCACAGCCGGCGGGCACGACGATGCACAGCAGTCCGGGCCCGAGCGCCCATCTgcacaccggcaccggcacgACCACGATCATGAACCAGTCCGGCACGATCagctcgacgacgacgaacccGTCCGCACTGATCAAGAGCCTGCTGGCGAACAAGGTAACGACAGCGGTCACCGATAGTACGCTCTCCGCTGCTACCGTTGGCTCggccgctgctgccgctgctgttgctgctgctgctgctgctgctgctgctccttaCTCCAGTAGTTTGTCCACTACTACCATCACCAACTCTCCTACTACCAATTGTTTGATTGCACCGAATGTTAACGTGCATCAGGTGGCGCAAAGACAGCAGATGCAAAAGCAGAAGCAAATGATCGAACAGAAGCTGCACCCGACCAGCTCCATCAACCCGTCGGTGGTGGTAACGTCCAACAACCCGAACAATCTGACCAACATAAAGGTGGGAAATTCGACCATTTCCATCAAGCCGGGCACGCTGCCCACCAACACGGTCATCACGGCAACGAATCCGCACGAAACGTCGTTCAATGCGCCACCACCGTTAGCACCACTCAGCCAACCGGGCGTCCAGCAGGGCACGATCATCAAAACGATCGCCGCCACGCACGAGCAGATGCAGCACCATGCGACCACCGCGGGCAAACTGTTGCCCAACAAGGTGCTTTCCGAGCTGCTCGAAAAGAAGCCGGGAGAAATGATCATTGCCGGCGAGACGACGATTAAGCGTAAGTTCGATCTTACCGACACGTCGATGGAACCGCCCGCCAAGCGGCTGGAAGGCGGTACAAAGACTGCCGATCTGTACGCCGAGCTGGCCGGTTCGATAACGGAAGGCGAGGAAATGGACGAGGCGGCGGCGCAGGAGGCCGAACAGCATGCTGCCAAGATGAAGCTGCAACAAATAacccatcaccagcagcagcagcagcaccaccaccaccagcaccagcaacagcagcagcaaatgattTCAATGCCCGTTTCGATGCAGCGACAGATAATCGTCACACCCAACAGTGCCCAGCCAATGATCATTTCCACGCCAACGGCAAATGTCACCAGCAATCCCGCCcagctacagcagcagcagcaattaaCATCGCAAACGACGGCCACAATTAAAACGGAGAGTGGATTCCAAACCGTACCGATCATACTGCAGCACAATGCGGTCGGTGGCGGTGCATTACAGTTGCAAAAGGCGACCGCCCCGGGTGGCGCGATTATGCAACCCTCCTCCGTACTGGCGGCACAACACCAGCAACCGACCCAGTACATCCTAGCGACCAATCCGCAAGGGCAAACGTACGTCGTGGCACAGCAGCCACAACCCCAGCCGCAACTCCAGCAAACGGTGCTGCTCGCCCAGGGCCAAGGCCAGCACGGAGGCAGTGGGCAgaaaacgatcatcatcgtgcagcagcagcagcagcagcagcagcagcagcagcaaccaccgtCCGGGTCGGGCAGCATCGGGCAGCAAATGACCGTGCAGGGAGCGATGGCCCAGAGCCAGGGACAGACGCAAAAGATTTTCCTTAACCAGCAGGGTCAGCAGATCCTGATGACGCAGCTACCTCGACAGATGATCGTCAGCCATGCCGGACCGTCGGTATCGGGTGGTACGACGATCATCACGTCCAGCGCACCTTCCATGGTGGGTGGCACGACCGGGACCACCATGATCGCCGGCGGCAGTGGTGGGACAATAATCGAAAAGAAGCCAATCTACATCACCACGAGCGCGCAGGGCAATACGATCAGCTTCGAGGGACTGCCGCCGCAACAGTTGCACCAGGTGCAGGCCCTGCAACCGACCAGCTCGACCGGAAGCACGTTCCAGATAAAGCCGTACGCGAATGTCGGGCATGTGcacggccagcagcagcagcacatcatCCAGCAGGCGAACCTATCGACGGGCGGCCCGGTTGGTCAGCAGACGATTCAGTTCATTCAACAGCCGGGTGGAACGTTGGTGCAGGCCCAGGGACAACTGCCCTCGACAACGCAAAGTATGCACGCGCCCACGCAGCAGATCGTTTTCCACGGCGCACACGGCAGCGGTTCGGGCGGTCCGCAGATCATACAGCAGCAAATCATTCAACCGGCCACGGTGCAGCATGCGGGCCAGCATATTGTGCAGAAGGTGCTGCACCAGCAACCGCAGCCGACGCAACAGCACCTGATACACGCGACCATGAAACAGAATCCGGCGCAGATAATCAccgttcagcagcagcaaaagcaaccgGCATCGACAATTACcacgcaacagcagcagctgccaCCGAGCCTATCGATCCAGCGACAAACGGGAGCCCTATCCCAATCGATCGTACCCGCCAAGCCTGTCCCGGTGCCAAACGTAGGGCCGACGGTGGTCGCCTCCGTATCGACACCTCCGCCACCGACCCCCGGACTGCCCGGTGGCAAGCAGCAAATCATTCAAGTCGTACAGCAAAAGATAGCGCCAGCGAATAATCATCAGCCAGGTGCCGTTGTTCGTCCGCCCGGAGCGGCCACTCAAGTCACGCAAACGATCGTCACAAGTGCACCATCATCGATCACATCGTATCCGACGCACCCAAGTGGAAGCGTCCCAACGGCAACGATAACCAGCGCAACGCAGGCAGCTCCCGTAGCATCGATTGCCGGCCAGCCGACACCGGGCCCATccacaccggcaccggcaccgATCGCGCCGCCGCCAGCTACATCATCGGCGCccatcaccaacaccatcaccattcCGGTGTCGGTTGCGACGGGCGGTACGAGCAGCACCTCGATCCAGATGATTCCCGCCATGGATCCGGCCAAGATAGTGGAGGAGGACGTGGAGCCGAGCTGGCCGTGGGTGTGCGATTGGCGCGGCTGTCCACGGAAAAAGTTCCAATCGGCAACGGAAGTGTTTCGGCACGCCTGCACGGTGCATTGCCCCGATACGGTCGACGTGAGTGCGGACATCTACTGCCAGTGGGGACCGGGACCGAATCTGTGCGACAATTTGCCGCGCAAGCGATTCTCGCTCATGACGCACATCCTCGATCGCCACTGTACGGTGGATtCTTTCAAAGCGGCCGTTCAAAGGAGGCTTGCCGGTGGACCGCAGCAACCCGTTCAACCGTACCCGGTCACGCTGGTGCGCCAATCGGGCTCGGGCGGCGGTGGTAATGCGGCGGGTGCGAACGGTTCTGCAGCTGCCGGGGGTGGCTCGGGCGAACGAGGATCACCGGCACCGGCCACCTGCACGAAGGTTGAATCGGGCAGTGCGGCCGAGAGTGCCGGAAGCGCGACCACCAACGGACCGGGGCAACTGTCCGCGGCTGGGCCAGCAGCGATGCATGCGATCAAGCGCTATTCTATGGATTACATCAACTCAAAGGAGTTCCAGGATGAAATGGAAGGTCCCGTAACGAAAAGCATTCGCCTCACATCCGCCCTCATCCTACGGAATCTGGTTGTGTACACCAACTCAGCGAAAAGAAGTCTCCGCATGTACGAAGCGCACCTGGCCGGTGTAGCGCTTAGCAATGTCGAGTCGAGCCGTACCGTTGCGCAGCTTCTATTCGAAATGAATGACACTGGGCCCAACTACTAA
Protein Sequence
MTTDVVKIERTNLPPMAVDETTNDASMASCNSVVSGGQPAGAGGGAAAGNTAGTPKESAKSQNLRRSVAKPTFEKDKYSFLNDLQMFHGKHGTPYLKLPKISGKEVDLHKLYSIVIGRGGWMKVNAREDWCEVIEELDLPTRCVNSEIALKQIYIRYLDRYERVNFHGEDKDPVEDDDDEKRLHRRWSVRMLHSTPSVYNHHQHNVPEGMRSSLKLSDDLYRASEYDKLILSLLSPLPNEQDFAINVCTLMSNENKHTLKVDKCPRLVYALLAHAGVFNHFSLRDTFDEYYSNIRKNSLQRFWKECLFEKPQVLELSLEDCFAKMGTDPSALIASIYQEEPEEMDTKSGNENEDEKESDFEIMSGRLNTASLRTFLSLGTGLGTNDYIGQRVLQIASIFRNLSFNEENLQLLGRNRTFIRFLIMCANARWNNLHHLGLDMLGNIANEIDINDPQSDEVTRCLVSTLSEGLEGADRGVIISCLEVLSKIAQKESNEENLNRCLNQQLYDQISLFLCLNDIMLLLYTLECIYSLTSMGEKPCNAIMHIRGVIDTLVSLVTVEAQSYGPDACILMRVVETIPGNMATHHAQGAYFQNGQMGQPNPPPTMTQLTVHKDAAGGQINANPHAVYPTPEVPKLPSLTITSKPVPSSPPVVQPAQQQMVQPAAPQPAVQQNQTAVAANNPQIVSVTRPPAADSPQIPVNVIARADPSLTVTHGTVANQQTAAATNTPAQPGHPGHAQQTITPGGVVIQSPAAAPSSIAAKHIQQQQAQESEQFAYAWLRASFEAAPAVRIEQQELYKLYLATNGKLGRKVIVPLSHFPRCVRAVFGGTVGPVQLKMEQNGVETIGYYYEGLRMRPKPLPIVHKGTVVTPAVDCTSTSRPGTSSNSSNPVTPAKHDEPSHSKITTTTTSCTAASTTLSTHSATFVGREMSSTSTAITASKANTVASNVGTTSGRCTVTTAHDGGRLPDVTPLPSQGTLRSSSVIAMAPPSSSSSANPITAPHTAQSVPVLHKTIPLQTVKCSPQPVQPKAILHFSQAQSAPSVGSTATSAGVSATIGKQIIVTQMGGKSVVINKATTGQQHQYIPTTPSSPLLQQVLSSDQKNNVIVVNQTTISPQPAGTTMHSSPGPSAHLHTGTGTTTIMNQSGTISSTTTNPSALIKSLLANKVTTAVTDSTLSAATVGSAAAAAAVAAAAAAAAAPYSSSLSTTTITNSPTTNCLIAPNVNVHQVAQRQQMQKQKQMIEQKLHPTSSINPSVVVTSNNPNNLTNIKVGNSTISIKPGTLPTNTVITATNPHETSFNAPPPLAPLSQPGVQQGTIIKTIAATHEQMQHHATTAGKLLPNKVLSELLEKKPGEMIIAGETTIKRKFDLTDTSMEPPAKRLEGGTKTADLYAELAGSITEGEEMDEAAAQEAEQHAAKMKLQQITHHQQQQQHHHHQHQQQQQQMISMPVSMQRQIIVTPNSAQPMIISTPTANVTSNPAQLQQQQQLTSQTTATIKTESGFQTVPIILQHNAVGGGALQLQKATAPGGAIMQPSSVLAAQHQQPTQYILATNPQGQTYVVAQQPQPQPQLQQTVLLAQGQGQHGGSGQKTIIIVQQQQQQQQQQQQPPSGSGSIGQQMTVQGAMAQSQGQTQKIFLNQQGQQILMTQLPRQMIVSHAGPSVSGGTTIITSSAPSMVGGTTGTTMIAGGSGGTIIEKKPIYITTSAQGNTISFEGLPPQQLHQVQALQPTSSTGSTFQIKPYANVGHVHGQQQQHIIQQANLSTGGPVGQQTIQFIQQPGGTLVQAQGQLPSTTQSMHAPTQQIVFHGAHGSGSGGPQIIQQQIIQPATVQHAGQHIVQKVLHQQPQPTQQHLIHATMKQNPAQIITVQQQQKQPASTITTQQQQLPPSLSIQRQTGALSQSIVPAKPVPVPNVGPTVVASVSTPPPPTPGLPGGKQQIIQVVQQKIAPANNHQPGAVVRPPGAATQVTQTIVTSAPSSITSYPTHPSGSVPTATITSATQAAPVASIAGQPTPGPSTPAPAPIAPPPATSSAPITNTITIPVSVATGGTSSTSIQMIPAMDPAKIVEEDVEPSWPWVCDWRGCPRKKFQSATEVFRHACTVHCPDTVDVSADIYCQWGPGPNLCDNLPRKRFSLMTHILDRHCTVDSFKAAVQRRLAGGPQQPVQPYPVTLVRQSGSGGGGNAAGANGSAAAGGGSGERGSPAPATCTKVESGSAAESAGSATTNGPGQLSAAGPAAMHAIKRYSMDYINSKEFQDEMEGPVTKSIRLTSALILRNLVVYTNSAKRSLRMYEAHLAGVALSNVESSRTVAQLLFEMNDTGPNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-