Basic Information

Gene Symbol
Arid2
Assembly
GCA_000349025.1
Location
KB663633.1:1321972-1332565[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-24 4e-21 74.8 0.0 2 89 69 154 68 154 0.93

Sequence Information

Coding Sequence
ATGACGACGGATGTAGTGAAAATAGAGCGTACAAGCCTGCCCATGGCGGTGGATGAGATAACCAACGATGCGAACGGTGCCAGCTGCAATAGCGTCAGTGGGCCCACCGGTGTTGGTAGCGGGGCCGTTGCCGGAACACCGAAAGAATCTGCAAAATCACAAAACTTACGGCGGACCATCGCTAAGCCAACGTTTGAAAAGGATAAGTATAGCTTTCTAAATGATCTGCAGATGTTCCACGAAAAACATGGTACACCGTACTTGAAGCTACCCAAGATCAGTGGAAAGGATGTCGATCTTCACAAGCTCTACTCGATCGTTATCGGTCGAGGGGGATGGATGAAGGTGAATGCTCGAGAGGACTGGGATGAGGTAATTGAAGAATTGGAATTACCGACGCGATGTGTGAATAATGAAATCGCTCTCAAACAAATATACATCCGCTACTTGGATCGATACGAACGGGTCAACTTCCACGGAGAGGATAAAGATCCAATtgaagacgatgatgacgaaaaGCGTCTTCATAGGCGGTGGTCTGTTCGTATGCTGCACTCCACACCGTCCGTGTACAACCATCACCAACACAATGTGCCGGAAGGATTGCGCTCTTCGTTGAAACTTTCTGACGATCTGTATCGTGCATCCGAGTATGATAAACTGATCCTGTCACTGCTGTCCCCATTGCCGAATGAGCAGGACTTCGCTATTAATGTGTGCACCCTGATGTCAAACGAAAACAAGCACACGCTTAAGGTCGATAAGTGCCCGAGGCTGATGTACGCCTTGCTGGCTCATGCCGGCGTTTTCAACCACTTTTCGCTGAGGGACACGTTCGATGAGTACTACTCCAACATACGGAAGAATTCATTGCAACGGTTCTGGAAGGAATGTCTGTTCGAAAAACCACAAGTGTTGGAACTGTCGCTAGAAGACTGCTTCGCTAAAATGGGCACAGATCCTAGTGCATTGATTGCATCTATTTATCCCGAAGAGCCGGAAGAGATGGACACCAAACAGGACAacgaaaatgaagatgaaagcGTACCAGCTTTTGAGATCATGACCGGAGGGCTGAACACCGCAACGCTACGATCCTTCCTCAGTCTTGGGACGGGCCTCGGGACGAACGATTACATTGGACAGCGTGTGCTGCAgattgcttccatttttcgcAATCTAAGCTTCAACGAGGAAAATCTGCACATTCTGGGACGCAATCGTACCTTCATTCGCTTTCTTATAATGTGCGCTAACGCGCGCTGGAACAATTTGCACCACCTTGGGCTGGATATGCTCGGCAACATTGCGAACGAGATCGACATTAACGATCCGCAGTCGGATGAAGTGACCCGGTGCCTTGTGTCGACGCTTTCCGAAGGTTTGGAAGGTGCCGATCGGGGTGTCATCATCAGCTGCATGGAGGTGCTTAGCAAAATTGCCCAGAAAGAATCGAACGAGGAAAATCTAAACCGTTGCCTCAACCAGAAACTGTACGATCAGATTAGTCTGTTTCTGTGTTTGAACGACATCATGCTGCTACTGTACACGCTGGAATGCATATACTCTCTCACATCGATGGGCGAGAAACCCTGCAATGCCATCATGCACATCCGAGGCGTGATCGATACGCTCGTGTCGTTGGTAACGGTTGAAGCACAAAGTTATGGACCGGATGCGTGCATACTGATGCGTGTGGTGGAAACCATCCCTGGAAATATGGCCACACACCATGCCCAGGGCACTTACTATCAGAATGCTGCTGGTCAGGTGGGACAACCGAATCCTCCACCGACAATGACGCAACTGACGGTTCACAAAGATGGTGGACAGGTGCCAGCTGCCGGCGGTCAACTGAATAACAATGCGCACGTCGTATATCCAACTCCCGAGGTACCAAAGCTTCCTTCATTAACTATCACCAGCAAATCAGTGCCATCCCCACCAGTTGTACAACAACCCCAACAACAGATGGTGCCACCTGCTTCACAAACGGTGCCGCCGAGCCAAACTGCCACTAACAATGGTCAAATAGTAAGCGTCACACGTCCACCGGCAGCCGATTCGCCTCAGATTCCAGTTAACGTCATTGGCCGTACTGATCCGTCAGTGGCTGTTGCGCACGGTACGCCAGGGAATCAGCAGCCGGCAGTTGTGACCAACGCACCACAACCTAATCCGGGCACATCGCATCAACAAACCGTTACACCTGGGGGAGCAATCATACAAAATCCTTCCACTCCATCGACATCGATCACTGCCAAacacatccagcagcagcaagcacaGGAAAGTGAACAGTTTGTCTATGCCTGGCTGCGGGCATCGTTTGAAGCTGCTCCAGCCGTTCGAATGGAACAGCACGAGCTGTATAAGCTGTACCTGGCCACCAATGGAAAGCTCGGGCGGAAAATGATCGTACCGCTGGCACACTTTCCGCGCTGTGTGCGTGCCGTATTCGGCGGAACGGTGGGTCCCGTGCAGTTGAAAATGGAACAGAATGGCGTTGAGACGGTTTCTTTCTACTATGAGGGTTTAAGGCTTCGCTCCAAACCGTTGCCGATCGTGCATAAAGGAACCGTGATgACACCTGGTGTAGACTGTACTTCATCGATTGGTACTAGCACTAATAGTAGCTCCATCACGTTGACAAAAGTCGACGAACAAAATCCTAATAAAGTAACCACCGCCAGTTGTACTACTACAATCACCACCCTCACGACACAAAATGCAACTGTCGGTCGAGAGTTGAGTTGCAGTTCAGGCATCGTTACAGGGGCAATCGCCAAACCTGCCACCACCGTCATAAGTAACGCTGGGGCTACTGGACGGCCTACCACAGGCTCTACTGTATCAACCAGCCAAGAATGTCGTCTGGTTGATGTCAGCCCAGCACAAGGAACGCTCCGTTCCTCATCGGTTATTGCAATGGCACCTCCGAGTAGTAATTCATCTAATCCTTCACCGACTGCACTGAAAATGCCACAGACGCCTCAATCCGTATCCGTGTTGCATAAAGCGACGATACAGACAGTGAAATCCTCGCAACAACAAGTACAACCTAAAGCAATAGTACATTTTACCCAAGCCCAATCGGTAAAATCATACGACCCTAGTAATGGCGGCGGAAGTACATCCTCCTCGGCGGGCACAGCGGGAGGAGGACCGACAACGATCGGCAAACAAATCATTGTCACCCAAGTCGGTGGCAAGAGTGTCGTAATCAATAAGACTACGTCCGGCCAACAGCATCAGTACATACCGTCGACACCTTCATCGCCTTTGCTCCAGCAAGTTCTCAGCAGCGATCAGAAGAACAACGTTATTGTGGTCAATCAAACGACCATCTCACCGCAACCAGCTGGCACGAGCCACACCAATCCCGGTCCCAGTTCGCACTTACAAACCGGCACCGGTACGACGACGATCATGAATCAGTCGGGCACGATCAGCTCCACGACGACGAACCCGTCCGCACTGATCAAGAGCCTGCTGGCGAACAAGGTAACGACAGCGGTCACCGATAGTACGCTCTCCGCTGCTACCGTTGGCTctgccgccgctgctgctgttgctgccgctGCTCCTTACTCCAGTAGTTTGTCCACTACTACCATCACCAACTCTCCTACTACCAATTGTTTGATTGCACCGAATGTTAACGTGCATCAGGTGGCGCAACGGCAACAAATGCAGAAACAGAAGCAAATGATCGAACAAAAGCTTCATCCGACCAGCTCCATCAATCCATCGGTCGTTGTAACGTCGAACAACCCGAACAATCTGACCAACATTAAGGTGGGCAATTCGACAATATCCATCAAACCGGGCACACTGCCCACCAACACGGTCATAACAGCGACAAATCCGCACGAAACGTCATTTAATGCACCGCCTCCGCTTGCACCACTAAGCCAACCGGGCATTCAGCAGGGTACGATCATCAAGACGATCGCTGCTGGTCATGATCCGAACCAGCTTCATACGGCCACCTCCGGCAAACTGTTACCGAACAAGGTGCTATCCGAATTGCTGGAGAAAAAACCGGGTGAAATGATCATCGCCGGTGAGACAACGATCAAGCGAAAATTCGAACTTACTGACACATCGATGGAACCTCCAATGAAGCGGCTGGAAGGTGTGACAAAAACGGCCGATCTGTACGCCGAATTAGCCGGCTCGATAACGGAGGGCGAGGATGTGGAGGATAGCGATATGAAAGCTGCACAAGACGCTGCAAAAATGAAGCTGCAACAAATATCACACcacacgcagcagcagcagcaacaacaacatcaacaacagcaacaacaaatgaTTTCAATGCCTGTGTCAATGCAGCGTCAGATAATTGTGACGCCCAACAGTGCCCAGCCAATGATCATTTCAACACCGTCTGCAAATGTCACTAACAACCCAACACCCCAGCAATTAACATCGCAAACGACGGCCACAATTAAAACGGAGAGTGGATTCCAAACGGTACCGATCATACTACAGCACAACGCGATGGGTGGCAGTACGTTACAGCTGCAAAAAGCCACTACACCTGGCGGTGCGATTATGCAACCGTCCGTGCTGGCGACACAACACCAGCAACCGACACAGTACATCCTTGCCACCAATCCACAGGGGCAAACGTATGTGGTCGCACAGCAGCCACAGCCGCAACCACAACTCCAACAGACGGTTCTACTCGCACAAGGGCAACAGCACGGTGGTAGCGGACAGAAGACTATTATCAtcgttcagcagcagcaaccaccgTCCGCATCGTCCATGCCGCAAATGACCATGCAGGGCGCGATGGCTCAAAATCAGGGTCAAACGCAAAAGATTTTCCTCAACCAACAGGGTCAACAGATTCTCATGACACAGCTACCACGACAGATGATCGTTAGCCACGGAGGACCGTCGGTTTCGGGAGGTGCAACGATCATCACATCCAGTGCACCCTCGGTAATGCCGGGCAGTGGGACGACAATGATCGCCACCGCCGGTGGCAGTGGGGGAACGATCATCGAAAAGAAACCGATCTACATCACCACGAACGCACAGGGCAACACGATCAGCTTCGAAGGACCACCGCAACAGTTGCAAATGCAGGCAATGCAATCGAACagtggtgctggtggtacGTTCCAGATCAAACCGTACGGCAATGTGGGAGTTCAcggtcagcagcagcacatcaTACAGCAGGCGAACCTTTCGACGGGTGCACCCGTTGGACAGCAAACGATCCAATTCATCCAGCACCAAGGTGGTACTTTGGTGCAGGCACAAGGACAACTACCTTCGACGACGCAAAGTATTCAACCCACGCAGCAAATTGTGTTCCATGGTGCACACGGCAGTGGTACGGGTGGGCCACAGATCATACAGCAGCAAATCATCCAGTCTGCTACCGGTCAGCAACCTGGTCAGCATATCGTCCAGAAGGTTTTGCATCAGcaaccacagcagcaacagcaacatctcCTACATGCCGCTATCAAGTCGAATCCTTCACAGATAATTACGgtacagcagcagaagcaaccGGTAACAACGATTACCACGCAACAGCCCCAACAAACGCAACAGTTGCCACCAAGCTTATCGATTCAGCGGCAAACTGCATCATCTTCACAGTCGATCGTTTCCACTAAATCTACGACCGTGCCAAATGTGACCCCCACGGTGGTTCAGACGTCAGTGCCTGCACCTACCCCAGGATTACCGGGAGGCAAACCACAGATCATCCAGGTCGTACAACAAAAGCTAACTACAGCACCAGCCGTTGGAGGTAATCAGACCCAAGGCGTTGTAGCTACGGGTCCTCAGCACGTTCGACCACCGGGACCTATCGGAGGGGCACCATCCCCAGTTGCTTCTCAAGGTACGGCGTTCGCTCAATCGACcgtcacacacacaatcgTGACAAGCCAATCGGCAGCTGCGTCGCAAACCTCACCGATGCCACAACCAACGTCTAGCGGGAATATTCCAACAGCAACCATTACAAGcgcagcagcaaacaatcaAGCTGCCTCTCCACAACCATCTCCAGTGGCGAATGTTACACAAACGCCACCAGTTCCACCCGCAATGGCTCCACCTGCGTCGGCCCCTCCGATCGCCAACACGATCACAATTCCGATGTCCGTCGCGACTAGCAGTGGTACGACTAGCACCTCGATCCAGATGATTCCTGCCATGGATCCGCAAAAAATTGTAGAAGAGGACGTCGAACCGAGCTGGCCGTGGGTTTGCGATTGGCGCGGCTGTCCAAGGAAAAAGTTCCAATCGGCTACAGAGGTGTTTCGGCATGCCTGTACCGTCCACTGTCCCGATACGGTCGATGTGACCGCGGACATTTACTGCCAGTGGGGACTCGGACCAAATCTTTGCGACAATTTGCCCCGTAAGCGATTCTCGCTGATGACGCACATTCTCGATCGACATTGTACGGTGGATtCTTTTAAAGCGGCTGTCCAAAGGCGACTTGCTGGTGGACCGCAGCAACCCGTCCAACCGTACCCGGTGACTCTGGTGCGCCAATCGGGGTCGGGTAACAGCTGCGTAGCGGTTGCAGCGGGTACGGCTGCTGTAGGTGCGGGAGAACGAGGATCTCCAACGCCGGCTTCCTGTACTAAGGTCGATACAGGAGGTACGGAGAGTAGCGGTAACGGGAATGCAAACGGACCAGGTCAACTGTCCGCAGCTGGACCGGCGGCTATGCATGCCATCAAGCGTTATTCTATGGATTATGTTAACTCGAAAGAATTCCAGGACGAAATGGAAGGTCCTGTAACGAAAAGTATTCGCCTTACTTCCGCTCTTATCTTACGGAATTTGGTTGTTTATACCAATTCTGCTAAACgGAGTCTACGCATGTACGAAGCACACCTGGCCGGTGTAGCGCTCAGTAACGTCGAATCGAGCCGTACGGTAGCGCAGCTTTTATTCGAAATGAATGACACCGGGCCAAACTACTGA
Protein Sequence
MTTDVVKIERTSLPMAVDEITNDANGASCNSVSGPTGVGSGAVAGTPKESAKSQNLRRTIAKPTFEKDKYSFLNDLQMFHEKHGTPYLKLPKISGKDVDLHKLYSIVIGRGGWMKVNAREDWDEVIEELELPTRCVNNEIALKQIYIRYLDRYERVNFHGEDKDPIEDDDDEKRLHRRWSVRMLHSTPSVYNHHQHNVPEGLRSSLKLSDDLYRASEYDKLILSLLSPLPNEQDFAINVCTLMSNENKHTLKVDKCPRLMYALLAHAGVFNHFSLRDTFDEYYSNIRKNSLQRFWKECLFEKPQVLELSLEDCFAKMGTDPSALIASIYPEEPEEMDTKQDNENEDESVPAFEIMTGGLNTATLRSFLSLGTGLGTNDYIGQRVLQIASIFRNLSFNEENLHILGRNRTFIRFLIMCANARWNNLHHLGLDMLGNIANEIDINDPQSDEVTRCLVSTLSEGLEGADRGVIISCMEVLSKIAQKESNEENLNRCLNQKLYDQISLFLCLNDIMLLLYTLECIYSLTSMGEKPCNAIMHIRGVIDTLVSLVTVEAQSYGPDACILMRVVETIPGNMATHHAQGTYYQNAAGQVGQPNPPPTMTQLTVHKDGGQVPAAGGQLNNNAHVVYPTPEVPKLPSLTITSKSVPSPPVVQQPQQQMVPPASQTVPPSQTATNNGQIVSVTRPPAADSPQIPVNVIGRTDPSVAVAHGTPGNQQPAVVTNAPQPNPGTSHQQTVTPGGAIIQNPSTPSTSITAKHIQQQQAQESEQFVYAWLRASFEAAPAVRMEQHELYKLYLATNGKLGRKMIVPLAHFPRCVRAVFGGTVGPVQLKMEQNGVETVSFYYEGLRLRSKPLPIVHKGTVMTPGVDCTSSIGTSTNSSSITLTKVDEQNPNKVTTASCTTTITTLTTQNATVGRELSCSSGIVTGAIAKPATTVISNAGATGRPTTGSTVSTSQECRLVDVSPAQGTLRSSSVIAMAPPSSNSSNPSPTALKMPQTPQSVSVLHKATIQTVKSSQQQVQPKAIVHFTQAQSVKSYDPSNGGGSTSSSAGTAGGGPTTIGKQIIVTQVGGKSVVINKTTSGQQHQYIPSTPSSPLLQQVLSSDQKNNVIVVNQTTISPQPAGTSHTNPGPSSHLQTGTGTTTIMNQSGTISSTTTNPSALIKSLLANKVTTAVTDSTLSAATVGSAAAAAVAAAAPYSSSLSTTTITNSPTTNCLIAPNVNVHQVAQRQQMQKQKQMIEQKLHPTSSINPSVVVTSNNPNNLTNIKVGNSTISIKPGTLPTNTVITATNPHETSFNAPPPLAPLSQPGIQQGTIIKTIAAGHDPNQLHTATSGKLLPNKVLSELLEKKPGEMIIAGETTIKRKFELTDTSMEPPMKRLEGVTKTADLYAELAGSITEGEDVEDSDMKAAQDAAKMKLQQISHHTQQQQQQQHQQQQQQMISMPVSMQRQIIVTPNSAQPMIISTPSANVTNNPTPQQLTSQTTATIKTESGFQTVPIILQHNAMGGSTLQLQKATTPGGAIMQPSVLATQHQQPTQYILATNPQGQTYVVAQQPQPQPQLQQTVLLAQGQQHGGSGQKTIIIVQQQQPPSASSMPQMTMQGAMAQNQGQTQKIFLNQQGQQILMTQLPRQMIVSHGGPSVSGGATIITSSAPSVMPGSGTTMIATAGGSGGTIIEKKPIYITTNAQGNTISFEGPPQQLQMQAMQSNSGAGGTFQIKPYGNVGVHGQQQHIIQQANLSTGAPVGQQTIQFIQHQGGTLVQAQGQLPSTTQSIQPTQQIVFHGAHGSGTGGPQIIQQQIIQSATGQQPGQHIVQKVLHQQPQQQQQHLLHAAIKSNPSQIITVQQQKQPVTTITTQQPQQTQQLPPSLSIQRQTASSSQSIVSTKSTTVPNVTPTVVQTSVPAPTPGLPGGKPQIIQVVQQKLTTAPAVGGNQTQGVVATGPQHVRPPGPIGGAPSPVASQGTAFAQSTVTHTIVTSQSAAASQTSPMPQPTSSGNIPTATITSAAANNQAASPQPSPVANVTQTPPVPPAMAPPASAPPIANTITIPMSVATSSGTTSTSIQMIPAMDPQKIVEEDVEPSWPWVCDWRGCPRKKFQSATEVFRHACTVHCPDTVDVTADIYCQWGLGPNLCDNLPRKRFSLMTHILDRHCTVDSFKAAVQRRLAGGPQQPVQPYPVTLVRQSGSGNSCVAVAAGTAAVGAGERGSPTPASCTKVDTGGTESSGNGNANGPGQLSAAGPAAMHAIKRYSMDYVNSKEFQDEMEGPVTKSIRLTSALILRNLVVYTNSAKRSLRMYEAHLAGVALSNVESSRTVAQLLFEMNDTGPNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00108166;
90% Identity
-
80% Identity
-