Basic Information

Gene Symbol
-
Assembly
GCA_000441895.2
Location
KE525174.1:302431-385077[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-09 3.3e-05 23.1 0.6 3 140 12 148 9 180 0.74

Sequence Information

Coding Sequence
ATGAAAAAAACGCAAAAACCAAGGCACGATGAGCATGATAGGATGGAGCGGAGAGAACGGGATAAACAGGCCCGTGCCCAGCTACAGGCCGAACGGGAGCCGGAACCAGCAGCGCCACTGTTTGCAGCACCGGTTAAAGTGCAAAGTCCATCCGAGGGGGACATGCAGATCGCCCAGCGCCTCGGCAACTTCGAGGTAGCCAGGGTGCACATCCTGGAACCGTCCACGTCGCATCATGTGATTGGCATCGCGCCCAGCCCGAACCCCTCGACGCCCCTGCGCCCTGGCACACATCGGCCACTTCCGCCGAAAACCAATAGCAATAGCAGTAGTACCATTAGCAATAGTAACGCCAACTTCGTCAAGCCAGCCGACAATCGGTCGCTGTTTAATGGGCGGCCGTCTGCCCCGCCGTCGTCGACGACGTCCTCGAGTGCCGGCCGGGCAAGACAACACTACCCGTTCGCCGATGCCGGTCCCATTAACAAACATGAGGTGCACGGACTCTCATCGAAGGGACCTCCCGCCTCCACATCCCTGCCGACGTCGCTGATGAACGGTCGTGTGCCGACGGCCTCCGGTGGTGGCATCGGGACCGGTGGTACGGGGGCGGCCACCACGGGACCATCCGTCGCCGGTGATAAGTTACCCTCGCAAATGCCCAACGGCCGACTGCCCCAGGTTGCAAATGCAAAAATGCCTAGAGTACGAAAGTTTGTTGACGAGAATGGTGAGATTCTCGATTCGAATCCGGTGGAATTACAAGTTTCCCCATTCCGTTGA
Protein Sequence
MKKTQKPRHDEHDRMERRERDKQARAQLQAEREPEPAAPLFAAPVKVQSPSEGDMQIAQRLGNFEVARVHILEPSTSHHVIGIAPSPNPSTPLRPGTHRPLPPKTNSNSSSTISNSNANFVKPADNRSLFNGRPSAPPSSTTSSSAGRARQHYPFADAGPINKHEVHGLSSKGPPASTSLPTSLMNGRVPTASGGGIGTGGTGAATTGPSVAGDKLPSQMPNGRLPQVANAKMPRVRKFVDENGEILDSNPVELQVSPFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-