Asin010902.1
Basic Information
- Insect
- Anopheles sinensis
- Gene Symbol
- bab2
- Assembly
- GCA_000441895.2
- Location
- KE525409.1:204-59285[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-11 2.8e-08 33.1 0.0 2 39 590 628 589 632 0.90 2 4 2.2e-12 4.3e-09 35.7 0.1 2 39 644 681 643 684 0.94 3 4 3.4e-18 6.6e-15 54.3 0.0 3 45 700 743 698 743 0.97 4 4 2.3e-17 4.5e-14 51.7 0.0 1 43 750 793 750 794 0.96
Sequence Information
- Coding Sequence
- ATGGATACCAAAGCATCATCGTCGGGGCCGGCTCCGACGCACCTGCCATCGTCCACATATCCTGCGACATCGCCGTACTCGAAGGCGGCCAGATCTTCGCATCAGTATTTTAGTTTAAGATGGAACAACTATCAGTCGAACATGACGTCCGTGTTTCACGAGCTGCTCGAATCGCAGTCCTTCGTGGATGTGACGTTGGCCTGCGAATACAATTCGCTGAAGGCGCACAAGGTGGTTTTGTCTGCATGTTCAGCATACTTTCAGAAAATATTGCTCGATAATCCGTGCAAACATCCCACCATCATTCTGCCCGCCGACATCTGCTTTTCCGATCTGCAGTTCATCATTGAGTTCGTCTACCGGGGGGAAATTGATGTGTCCGAAGCGGAGCTTCAGAGTTTGCTACGGACGGCGGAGCAGTTGAAAATCAAAGGCCTTTGCGAAGTGGGCGAGCCGCAGTACGAGCAGGACTACTCGCCCGCGGTCAAGCGCTACAAGCCGTACCGGTCCCGGTCGCCCCCGGACAACCGGCATCAGCACCACCACCACCAGCAGCCACCGCCACCGCCCCCACCCTCGTCCGGTTCGGCGGCGGGATCGGCGTCCACCGGCGGCGGGGGTCGTACCACCGGCTCGGGAGGAGGTGCAGGATCGCACGGCGGCAACAACACCAACAGCGGCTCGTCTTCTTCCTCCCAGTCGACGGGCTACAGTGAAAACGGCGGCAAGGGCGTCAAAGAACGATCGTCGGCCGGCGGAACAGTAGTGGGAGGAGGCGGAGGGACAGGCGGTGGCCGTAGCCATTATCACCCTACCCAGCAGCAGCACCATAGCCTGCACCATCACCATCCGCACCTGCACCATCCGCATCATCCGCACCACCATCTGCATCTTGCCGGAGACGAGGACGATGGATCGCCGTCCTCGGTCGTAGTGGTAGAAACGCACGATTTGACCACGACCGGGCCATCCGCGAGCTCCGCGACGAAGGATAAGCTTTACCACCTGCAGCAGCAACAGCACCACCACCAAAACCATCCGCATCAGCAGCAGCATCATCACCATCATCATCATCCACCGTCTTCCCAGCAAATCGGAGGCAAAATGGCCAGCCTAGGAATGGGCGTTGGAATAAATGGCTCCGTGATGGGTGTGGTACCGATGGGCTATTTGGATTTTGCACCCGAGCCCCCCGCCCCGACGGCGACCCCGGTGACGGAGCACGTGGACATCAACTGTGCGCCAAGCAGTCACGATACGCGTGATCTGTCCAATTCTGTGCCAAACGATGGTGACTTACGAGTGAAATTCGAAACCCCGGCCTCGAGCGTGTCGTCGTCCTCTTCCAGCCAACATCCGGAGAATCTGGTCACCGGTAGCGGTGGCGCCGGTGGTGGTGGTGGTGGTGGATCGGTCACGCCCGGTCCTGCTCCGAACAATGGCAGCAGCAACGGCGGTGGAGGCCCGAACGGCACCGGCGGTGGGGACGAGATGAAATCGAGACTGAACCTGAAACAGGAAATCATTACCGACGCCGCCGACCAGCAGCAGACGATGGAGGTCGAGCAGGATCAATCGTCGATGCACGGCATGGTCGTGACGCCGGAAATATCTGGCATCATGAACCAGAGCCAAATGAGCGATATGTATCAATCAGATGCCAGTGAAGACTCGAAGGCGGGTATTTTGGATGGATCGTCCATGCAGTACACCAATCTGACGAGCCCGAACGAAGCGAAAACCCCCACAGGGCCTAAAACGTGGACGGCCGAGGATATGGAATCGGCACTGGAGGCCCTGCGTACACATAACATGAGTCTGACGAAGGCATCGGCAACTTACGGTATTCCATCGACGACCCTATGGCAGCGAGCCCACCGGCTCGGCATCGACACGCCGAAGAAGGAGGGCCCGTCGAAGACGTGGAACGAAGATTCACTCAACAGTGCGCTGGAGGCGCTGCGCACCGGCACGATCTCCGCCAACAAGGCCTCGAAAGCGTTCGGCATACCGTCTTCCACGCTGTACAAGATCGCGCGCCGCGAGGGCATCCGCTTGGCGGCACCGTTCAACGCGGCGCCCACCACCTGGTCCGCGGAGGATCTGGATCGTGCCTTGGAGGCGATCCGGGCCGGGCAGACGTCGGTGCAGAAGGCCAGCACCGAGTTCGGCATCCCGACCGGCACGCTCTACGGGCGGTGCAAGCGCGAGGGCATCGAGCTGTCGCGCTCGAACCCCACACCCTGGTCCGAGGACGCGATGATGGAAGCCTTAGAGTCCGTTAAACAGGGACACATGTCGATCAATCAAGCCGCCATCCACTACAACCTACCGTACAGCTCACTGTATGGCCGGTTCAAGCGGGGCAAATACGATACGCCCAGCTCGGGCGGCGGCGGCGGCGGTGGTGGCAGTTCGACAAGTGCTGCTGCTGCTGCTGCTACCGGTGGTGGCGGTGGTGGTGGTGGAGGCGGTGGTAGTGGAGGCGCCGGCGGAGCAAGCACTAATGTTGGCGGTAGCCCCCAGATGGAGTTTAAGGTAGAACCTCAGCAAAACGATCATAGTCCAGAGAACACGGTAAATTACAGTTATTATTAA
- Protein Sequence
- MDTKASSSGPAPTHLPSSTYPATSPYSKAARSSHQYFSLRWNNYQSNMTSVFHELLESQSFVDVTLACEYNSLKAHKVVLSACSAYFQKILLDNPCKHPTIILPADICFSDLQFIIEFVYRGEIDVSEAELQSLLRTAEQLKIKGLCEVGEPQYEQDYSPAVKRYKPYRSRSPPDNRHQHHHHQQPPPPPPPSSGSAAGSASTGGGGRTTGSGGGAGSHGGNNTNSGSSSSSQSTGYSENGGKGVKERSSAGGTVVGGGGGTGGGRSHYHPTQQQHHSLHHHHPHLHHPHHPHHHLHLAGDEDDGSPSSVVVVETHDLTTTGPSASSATKDKLYHLQQQQHHHQNHPHQQQHHHHHHHPPSSQQIGGKMASLGMGVGINGSVMGVVPMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSNSVPNDGDLRVKFETPASSVSSSSSSQHPENLVTGSGGAGGGGGGGSVTPGPAPNNGSSNGGGGPNGTGGGDEMKSRLNLKQEIITDAADQQQTMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKAGILDGSSMQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRTHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGGGSSTSAAAAAATGGGGGGGGGGGSGGAGGASTNVGGSPQMEFKVEPQQNDHSPENTVNYSYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00107771; iTF_00109052; iTF_00096296;
- 90% Identity
- iTF_00107771;
- 80% Identity
- iTF_00107771;