Aqua006319.1
Basic Information
- Insect
- Anopheles quadriannulatus
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCA_000349065.1
- Location
- KB666511.1:62589-119437[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.097 1.2e+03 -2.0 0.8 29 52 70 91 66 123 0.36 2 2 1.9e-100 2.3e-96 322.1 29.3 1 299 128 422 128 423 0.91
Sequence Information
- Coding Sequence
- ATGTTACTGGACTGGCGGGGTGCGTGCGCCAGTCGTTCCCATACCGTGCAGAGTTTTCGTGCACCAACACCACCATCACCATCAACCGGCCCCGGTGCCATACACCGCGGCGTACCAGCGCTTACAACAACACCACCACCACCAGCGCACACGACTTCAACATTTATCTTTTGCATTTCGTCATTTCTTGGCCTACTCGATCAGCAGGAGCAACAACAGAAACGCACCACCAACAGTAGTAACACGAGTAACACGACGCCACACACCACCGGTAGTGCAGCAGGCGGCGGTAGGATGGAGAGTCCGAGTGCCGGCGGCAGGCGTCGCGGCAATTCGCGCATCAATGCCGAAGATCAGGCGCTCGATCAGATCGCAAAGGAGGCCGAGGCACGATTAGCGGCACGGCGCCAGGCCCGTGCGGAGGCCCGCGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGAAGGAGCTGGAGCAGACGGCGGACCGGGTGTTCGACCTGCAGCAGCAGTCGATCGGGCTGTCCGAGCCGGCGACCGCGCTGGTCACGACGACGCCCCGGTCGAGCCGCATCCTGGCGCAGAATGCGGTGACGCGCGGCAGCGCCCTGTCGTCGCGCCGCAACAGCGAGGACTCGCTGGAGGAGGAAGCCCGCAGCCTGCGCGACCTACGGCACGAGCTGAAGGATGTGGAGGAGCGCTTCCGGAAGGCGATGATTGCGAACGCCCAGCTCGACAACGAGCGGTCCTCGCTCAACTACCAGATACAGCTGCTGAAGGACAAGCTGGAGGAGGTGGAGGAGTCCCACTCGCAGCTGCAGCGCGAGTACCGGGAGAAGTGCCGCGACCGGGAGGCGCTCAAGCGCAACAACGACAAGCTGAGCGAGGAGCTGAAGCTCGTCCAGGGCCAGCTGCAGGAGCGGGACGCACTGATCGAGCAGCACGGGCTGGTCATAGTCACGGTGGAGAACGAGGACGGTACCGATGCGCACCGCGCCCTAGTCACAGCGGATAACGCGCAGCTGCTCAAATCCGTGCCCGGTTCCCTTGACGTAAGACTGAAAAAGTTTGCGGCCGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGAACGGTTCGCTCGTCGATGACGATTACGAGGATGCGCAGCGTGAAGCCAACAAGCTGATCACCGAGTATAAATACAAGCTGCAGAAGGCGGAGCAGGAGATCGCGAACCTGCAGGCCAGCCTGGCCCGCTCGGAAACGCAGGTGATCCGGTACAAGAGCACGGCCGAGGCGGCCGAGAAGGCCGAGAGCGATCTGAAGATCGAGCGAAGAAAGCTGCAGCGCGAGCCTATCATTACGCAATACTGGGACGAGTGTCACTGTCAGTAG
- Protein Sequence
- MLLDWRGACASRSHTVQSFRAPTPPSPSTGPGAIHRGVPALTTTPPPPAHTTSTFIFCISSFLGLLDQQEQQQKRTTNSSNTSNTTPHTTGSAAGGGRMESPSAGGRRRGNSRINAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKELEQTADRVFDLQQQSIGLSEPATALVTTTPRSSRILAQNAVTRGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEVEESHSQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXMNGSLVDDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQREPIITQYWDECHCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -