Aqua005151.1
Basic Information
- Insect
- Anopheles quadriannulatus
- Gene Symbol
- -
- Assembly
- GCA_000349065.1
- Location
- KB666088.1:84707-87693[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.7e-12 5e-09 35.2 0.0 2 39 198 236 197 240 0.90 2 4 1.2e-12 1.6e-09 36.7 0.1 2 39 252 289 251 292 0.94 3 4 1.8e-18 2.4e-15 55.4 0.0 3 45 308 351 306 351 0.97 4 4 1.2e-17 1.7e-14 52.7 0.0 1 43 358 401 358 402 0.96
Sequence Information
- Coding Sequence
- ATGGCCAGCCTAGGGATGGGCGTTGGAATAAATGGTGGTTCCGTTATGGGCGTACCGATGGGATATTTGGACTTTGCACCAGAGCCTCCAGCACCGACGGCGACGCCAGTGACAGAGCATGTGGACATTAATTGTGCGCCTAGCAGCCACGATACACGTGATCTGTCCAATTCTGTGCCAAACGATGGTGACTTACGAGTGAAATTCGAAACCCAGCATCCGGAGAACTTGGTTACTGGCAGCGGTGGTGCTGCCGGCTCGGTGACACCTGGTCCGCCCACCAACAATAGCAACGGCAACGGAGCGGGCGGAGATGAGCTGAAGCCGAGACTGAACCTGAAGCAGGAAAACATCAGCGATGAGCAGCAGCATCAAACGATGGAGGTCGAGCAAGACCAGTCCTCGATGCACGGCATGGTGGTAACGCCGGAAATTTCGGGCATCATGAACCAGAGCCAAATGAGCGATATGTACCAGTCGGATGCTAGCGAGGACTCGAAGGTGGGCATTCTGGACGGTTCCTCGATGCAGTACACCAATCTGACCAGCCCCAACGAAGCGAAAACGCCTACCGGACCGAAAACATGGACCGCGGAAGATATGGAGTCGGCGCTCGAGGCGCTACGCTCTCACAACATGAGCTTGACTAAGGCCTCTGCTACGTACGGTATTCCATCGACGACGCTGTGGCAGCGGGCGCACCGGCTCGGCATCGATACACCGAAAAAGGAGGGTCCGTCCAAGACGTGGAACGAGGACTCGCTCAACAGCGCACTGGAAGCGCTACGGACGGGCACGATCTCCGCCAACAAGGCCTCGAAAGCGTTCGGCATACCGTCGTCGACGCTGTACAAGATTGCGCGCCGCGAAGGCATCCGCCTGGCGGCGCCGTTCAATGCCGCACCCACCACCTGGTCCGCGGAAGATTTGGACCGTGCCTTGGAAGCGATCCGTGCCGGGCAGACCTCCGTACAGAAGGCCAGCACCGAGTTCGGCATTCCCACTGGCACACTGTACGGGCGCTGCAAGCGCGAGGGCATCGAGCTGTCCCGATCGAATCCCACGCCCTGGTCCGAAGACGCGATGATGGAGGCGTTGGAATCTGTCAAGCAAGGACACATGTCCATCAATCAAGCCGCCATCCACTATAACCTACCGTACAGCTCACTGTACGGCCGGTTCAAGCGCGGCAAGTACGATACGCCCAGCTCGGGAGGCGGCGGCGGTGGCAGTTCGTCCAATGCTGCTGCTGCTGCTGCTACCGGTGGAGGCGGCGCGGGCAGCGGTGGCGGTAGTGGCGCCGGCAGCGCCGCTAGTGCCGGAACAGGTGGCAATAATGTTGGCAGTAGTCCCCAGATGGAGTTTAAAATAGAACCACAGCATAACGATCATAGTCCAGAGAACACGGTAAATTACAGTTATTATTAA
- Protein Sequence
- MASLGMGVGINGGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSNSVPNDGDLRVKFETQHPENLVTGSGGAAGSVTPGPPTNNSNGNGAGGDELKPRLNLKQENISDEQQHQTMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSMQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGSSSNAAAAAATGGGGAGSGGGSGAGSAASAGTGGNNVGSSPQMEFKIEPQHNDHSPENTVNYSYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104297;
- 90% Identity
- iTF_00104297;
- 80% Identity
- -