Apun002490.1
Basic Information
- Insect
- Anopheles punctulatus
- Gene Symbol
- -
- Assembly
- GCA_000956255.1
- Location
- JXXA01002012.1:263-2275[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.4e-07 0.00083 18.8 0.0 5 27 239 261 237 262 0.92 2 5 0.0025 6.1 6.4 0.0 5 36 338 369 335 371 0.80 3 5 0.029 72 2.9 0.0 4 18 419 438 416 453 0.87 4 5 0.0012 2.9 7.4 0.2 7 38 535 566 532 572 0.91 5 5 5.5e-11 1.4e-07 30.9 0.0 2 39 626 664 626 668 0.90
Sequence Information
- Coding Sequence
- ATGGCACAGCTGTCCAGCCAACCGGCTAAGTCGATGCTGATGTGGCTTGACTATAAGGAACATATGAAGCGCACGTTGGGGTACATCTTCGATTGCCAGCAATTCAACGATTGCCGACTGGTTGCGCCTGGCGGGGAAGTGTACGCCAACCGTGCCATTCTCAGTATGGCATCCAGCTTCTTTGAGAACATCTTCTCCAGCGCGCCCCCGTTGTCTGCGGGACTAGCAGCCGATGTTCCGACGGTTCTTATCCCAGATCTTACGTTGTCCACGCTAAGGGTTGTGATTAAATTCATCTATACCGGCAGCGTAACGCTACGTTCGACGGAGATGATGCCGTTCATGCAGGCATGCCATATGCTGCAGATTCGCGGCGTCGAATGTTACGACAACGTAGTGATGGGCATTTTCATTGAAGGTTCAACTAGAGGAGAGATAGAATCGACACGAGCGAATTCGGTGTTATCAAGCGAGTCCGGCAGTAACAATCCGGACTTCATGAACAATGGGGAACCTGAGCACGATGAGCAAACAATGACATGGAACGAAGAGCCATCGGAACCGATGGCATTAGATGAAGTGTTGATCAAGATAGAGCCTTGTGACGCGCATGAGACGGAGGAGCAGCAGGATCCATTTAGAAAGGAGGATAGAAAAGCGCAAGCGGAAACGCCGATAGCGCGAGGGCGAATTCTAAAAACGTACGCCACCTGTCTGACAGCTGCGATCGTTGCAGTAATGAACGGTGGAATGACCTTAAGGAAAGCCGGGGTTCTGTACCATGTGCTGTGTCATAAGCTGGGGGACTGGACACAAAGGGTAGAGCGTGCTGTGCTGTCCAAAGCAAGCGATGATAGCACTAAATTGCAAGCGCCAGTCGCAGAAGCCACGATCGAGGCCGTTCTGGAACAAAGCAAGCGCGATGTGAATGACATACTGGATGGCGTTGATGAGTCTGCGAAGGCGGTCATCTTGAGTAAGAGGAGGCATACGGTAACCTACGATGCGCGGCTAATGGCTGCCCAAGACCAAATTCTCCAGAAGGGTGTAACCGTCAGTGCAGCGAGCATGCGGTACAACATCCCAGAAAAAGTTATAACAAATCGTCTACATCCTGTGATTAGCGGTCCCAGCCCGAATTGTAGCACCAAACAGACACATGGTAGATGGCAGCCGAAACAGTCACCAATGAGTATAAGAAATAAAGCTACTTTGGCGATGTTTCGGAGAATCTACACACCAGAACGCCTTGCCAGTCTGAAGGAAGCGATCCGGGCAATCGTGGTCGATGGAAAGTCAGGAAAATTGATGAGCCGAATGCACGGGTTCGCTAATCAGGTTTTGTATCGTCATGCACGCAACGTGGCGGTGCAAACCCGTAGCAATCGATCGGGAGATCCACGCTCCTTTGCGGAGCGAGTGGATGCTGCCATCGATGAAATGCTGGGAACTGAGAAGAAAGACGAGCCACAGAAGAGCCAACCGCCAAACAATCGACCGATTCAGCTCCCACCGTTGGTGCCGATCGTGCCGAATGCATCGCGAATGGGTAAGCTATACTGGGGGCAGAATGATCGAGGATCATTAACTGCCCGGGTGAAGCAGGCGGCCAGTGCGGTCGCTACAGGACAGATGCAGTACCCAGAGGCGTCGCGTGCTTTTCGATTGAACAAAAGCAGCATCTTTAGGTATGTGCAGAAACTAAATAACCAATCGTTAcaaacaccggcaccgaccgcTTCGAAAACGTCGGAACGGTGCTCAGCTGCGCCGGTACCAGAGGTGCACCAGGAAGACAGCACCGAGGACAATGTACCCACGGTCCCGAAACCGGACGTGCCGTTAGAGATACCGGAATTGATTCCCTTCAGCTTCGAAGATCGGTTGGTGGCAGCGGTCAAGGCAATCACTGAGCGGGGCATGAGCTATCGGGAGGCATCGTTGCGCTACGACATCTCCAAGGTGACGTTGTGGCGCAAGATAGTCAAACAGAACAGAGGTAGTCATGTATAA
- Protein Sequence
- MAQLSSQPAKSMLMWLDYKEHMKRTLGYIFDCQQFNDCRLVAPGGEVYANRAILSMASSFFENIFSSAPPLSAGLAADVPTVLIPDLTLSTLRVVIKFIYTGSVTLRSTEMMPFMQACHMLQIRGVECYDNVVMGIFIEGSTRGEIESTRANSVLSSESGSNNPDFMNNGEPEHDEQTMTWNEEPSEPMALDEVLIKIEPCDAHETEEQQDPFRKEDRKAQAETPIARGRILKTYATCLTAAIVAVMNGGMTLRKAGVLYHVLCHKLGDWTQRVERAVLSKASDDSTKLQAPVAEATIEAVLEQSKRDVNDILDGVDESAKAVILSKRRHTVTYDARLMAAQDQILQKGVTVSAASMRYNIPEKVITNRLHPVISGPSPNCSTKQTHGRWQPKQSPMSIRNKATLAMFRRIYTPERLASLKEAIRAIVVDGKSGKLMSRMHGFANQVLYRHARNVAVQTRSNRSGDPRSFAERVDAAIDEMLGTEKKDEPQKSQPPNNRPIQLPPLVPIVPNASRMGKLYWGQNDRGSLTARVKQAASAVATGQMQYPEASRAFRLNKSSIFRYVQKLNNQSLQTPAPTASKTSERCSAAPVPEVHQEDSTEDNVPTVPKPDVPLEIPELIPFSFEDRLVAAVKAITERGMSYREASLRYDISKVTLWRKIVKQNRGSHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00102951;
- 90% Identity
- iTF_00106501;
- 80% Identity
- iTF_00106501;