Aplu005188.1
Basic Information
- Insect
- Anopheles plumbeus
- Gene Symbol
- stc
- Assembly
- GCA_034621735.1
- Location
- JAOEFI010000004.1:13227607-13230844[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.8 1.7e+04 -4.0 1.6 15 19 297 301 296 301 0.81 2 15 0.011 1e+02 3.2 0.2 4 10 330 336 329 337 0.96 3 15 1.5e-06 0.014 15.4 15.2 3 19 343 359 342 359 0.93 4 15 0.05 4.7e+02 1.0 15.3 1 18 395 412 385 413 0.87 5 15 3.7e-10 3.5e-06 27.0 11.9 1 18 453 470 453 471 0.98 6 15 2 1.9e+04 -4.2 0.7 12 16 503 507 502 508 0.74 7 15 0.00024 2.3 8.4 17.7 1 19 512 534 512 534 0.84 8 15 0.011 1.1e+02 3.1 6.8 1 11 574 584 574 585 0.94 9 15 0.57 5.4e+03 -2.4 1.0 4 10 589 595 588 595 0.90 10 15 5.4e-09 5.1e-05 23.3 18.6 1 18 601 618 601 619 0.98 11 15 0.43 4e+03 -2.0 0.8 5 10 647 652 647 653 0.82 12 15 1.1 1.1e+04 -3.3 7.2 10 18 666 675 655 676 0.85 13 15 5.8e-06 0.054 13.6 10.3 1 16 712 727 712 734 0.91 14 15 3.7e-06 0.034 14.2 11.3 1 18 744 762 744 763 0.90 15 15 0.51 4.8e+03 -2.2 0.7 7 12 778 783 772 783 0.68
Sequence Information
- Coding Sequence
- ATGGCTACTGGTGGCGAAAATGCAGCTACAAACGGGGGAAGCGACGCTTTTAATGAGTTCGTTTCCCAGTTCAATGCCCGTTTGGAACTACAGTATTTGTCGTCAACCATCGGGCAACAGCAGGGAGCATACTATGCGCCCGGGTCGTTTCCGCCTCACGTGATGGCTTCCAATCTTACACCGACCGCGGCAGAATTTGTACCCCGCAAATACCAGTCCGCGACACCACAGCCAGCTCCGGTGGAAGCATACGTTGCAGTTGCCCCGGCGGTGTTCAACAATGTTTGCGAAGCGCCAAGTTTAACCGCCGATcgagaggaaagagagaatgTTCGTGCTGGACCTTCCAATCACCACAGTTCCGGACGGGCTAGTTACGGTAGTGGGGGTGGTAGTCGTCCACGTCGAAATGAAAGTTTGAAACCTCGCAATGGCTGGCACACACAAGACGACCGTCCGGTGGGGCGTGGTAGGtgggacaaaaaacaaacggcacagGGCATCGGTCGGCGGCAACGGGAGAACGACGATGAAGACAACCTGTCcataaacgaagaaaacgcgaCATCCCGCTACGGTGCTGGGAGACAGCGAGGGAATCAGAGAACAATGCATCACCATGACCAGGATCGCAAAACGAACCGTCGGGCTTCTCCGCCTGGGGAAGCGATGCAATCCGAGCAAGCCTTTAAACCGCTTTCAAAGTGCTCCCAGCGCGAGAAGCTGATGCGGGAAATTGAATGCTACCGGCTCGAGTGCTTGGTCTGCTGTGAGATCGTCAAACCGATGCAATCTACCTGGTCCTGCGGTAACTGTTACCATATATTCCATCTAGGGTGTGTTACGCGCTGGGCCACCAGTTCCCAGTCGGATGGCGGTAGCTGGCGCTGCCCGGCGTGCCAGAACGTCCTGAAGACGATCCCTCGCGAGTATTTTTGCTTCTgcgggaaacagaaaaacccgTCGTACAATCGCAACGACTTGGCGCATACTTGTGGGGAGGTTTGCGGTCGGCGGGACCTATGCGAGCATGCATGCACGCTGCTGTGCCATCCCGGCCCTTGTCCACCCTGCCAGGCATCGGTGCAGCGACGATGCGGCTGTGGTCGGTTAGAAAAGCCCCTCCAGTGTAGCCATAAAGAGCAACTGTTGTGCGGAGAGACGTGTGGTAGGTCGCTCAACTGTGACCAACATCGATGCGCGAAACGCTGCCACGGTGAAGACTGTGATGCTTGTGGAGAACAGGTAGAGCACAACTGTTACTGCGGCAAAAGTGATCAATTGGTGCCGTGCACCAAGGACAACCTGGAGAAAATCCAGTACGGCTGTGGAGAAGTCTGTGGGCACCCGCTCACTTGCGGAAACCATCAATGCGCACGGTTGTGCCACGAGGGGGAGTGTGATCCCTGTGTGGACAGCCCGGAACGGGTGCTCAGTTGCCCCTGCGGAAGGCAAGCCATTGAGCCGGGAAGCAGGACATCCTGTCTCAGCCCTGTGCCGACTTGCACGGGCAATTGCGGAAAAAAGTTTGCGTGTGGCCCACCCGGAGCAAGTCATTGCTGTGACGCACGGTGTCATCGAGGGGAGTGTCCACCGTGCAAAAAGTCCACGACCGTCAAGTGCCGTTGTGGCAACATGGACCAACCGATGAAGTGTAAGGACTTGAAGACGCGTGCTGATGACGCGCGTTGCAAGAAGCGTTGCGTCCGTCGACGTAGCTGCGCGAAGCACAAGTGCAACCAACTGTGCTGTATCGATCTGGATCACATCTGCCCGAAAACATGCTCACTGCCACTGTCCTGCGGGCGCCATCGGTGCGATAAGCCTTGTCACAAGGGTAACTGCCAGCCGTGCCATCGGGTATCGTTCGACGAGCTGACCTGCGAATGTGGCGCCAACATCATCTACCCGCCCGTGCCTTGCGGAACGAAAAAACCGACCTGCGATCGACCGTGTCCTCGGCGGCACGTCTGTGAACATGCTGCCCTGCACAACTGCCACTCTGAGGCGGAGTGTCCTCCGTGCGTCGTGCTTACAGCGAAGTACTGTTACGGTAAGCACGAGCAGCGCAAAACTATTCCGTGCTACCAGGATTCGTTCAGCTGCGGAATGCCTTGTTCTCGGCCGCTGATCTGCGGGCGGCATAAGTGCATCCGTCCGTGTCACGAGAACAACTGCTCGCAAGAGGGCGTTGCGTGTAAGCAAAACTGTACCGTTACCAGGGAGAGTTGCGGGCATCTGTGTAACGCACCGTGTCACGAAGGCGAGTGTCCGGATGTTGCTTGCCGCGTGATGGTCGAGGTGACCTGCGAGTGTGGCAATCGAAAGCAGCAGCGGTCTTGTCACGATTTTTCTAAAGAGTATCGTCGCATTGCTTCGACGCAGCTGGCCTCATCGGTACAGGAAATGCAGCGTGGAGGTTCGGTCGAACTGAGCGACATTTTGGGGCCATTGCGACCAAAGAACTATAAAACCCTCGAATGTAACGAGGAATGCAAACTGCTCGAGCGTAACCGACGGCTCGCGATGGCCCTGCAAATCCGCAACCCGGACCTGCCTTCGAAACTCCAGCCTAACTATTCCGAGTTCTTGCGCACCTACGCCAAGAAGGACCTGCCTTTGGTGCAGATGGTGCACGAAAAGTTGACCGAGCTGGTAAAGCTGGCCAAggagagcaaacaaaaatcgcgCTCCTACTCGTTTCCGATAATGAACCGAGAGAAACGAACGGTGGTGCAAGAGATGTGTCACATGTTCGGCGTAGAAGCGGTCGCATACGACGCCGAGCCGAACCGAAATGTCGTGGCAACGGCGGATCGATTCACGTCATGGCTGCCGAGCATGAGTTTGATGGAGGTGCTGCAGCGGGAGAATGGTCAACGGCGCATCGTCGTACCGAATCTGAATGCCTGGGGTCGACCGTCGACTGCATCGTCGTCCAGAGCCACGAACAGTAAATGA
- Protein Sequence
- MATGGENAATNGGSDAFNEFVSQFNARLELQYLSSTIGQQQGAYYAPGSFPPHVMASNLTPTAAEFVPRKYQSATPQPAPVEAYVAVAPAVFNNVCEAPSLTADREERENVRAGPSNHHSSGRASYGSGGGSRPRRNESLKPRNGWHTQDDRPVGRGRWDKKQTAQGIGRRQRENDDEDNLSINEENATSRYGAGRQRGNQRTMHHHDQDRKTNRRASPPGEAMQSEQAFKPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSTWSCGNCYHIFHLGCVTRWATSSQSDGGSWRCPACQNVLKTIPREYFCFCGKQKNPSYNRNDLAHTCGEVCGRRDLCEHACTLLCHPGPCPPCQASVQRRCGCGRLEKPLQCSHKEQLLCGETCGRSLNCDQHRCAKRCHGEDCDACGEQVEHNCYCGKSDQLVPCTKDNLEKIQYGCGEVCGHPLTCGNHQCARLCHEGECDPCVDSPERVLSCPCGRQAIEPGSRTSCLSPVPTCTGNCGKKFACGPPGASHCCDARCHRGECPPCKKSTTVKCRCGNMDQPMKCKDLKTRADDARCKKRCVRRRSCAKHKCNQLCCIDLDHICPKTCSLPLSCGRHRCDKPCHKGNCQPCHRVSFDELTCECGANIIYPPVPCGTKKPTCDRPCPRRHVCEHAALHNCHSEAECPPCVVLTAKYCYGKHEQRKTIPCYQDSFSCGMPCSRPLICGRHKCIRPCHENNCSQEGVACKQNCTVTRESCGHLCNAPCHEGECPDVACRVMVEVTCECGNRKQQRSCHDFSKEYRRIASTQLASSVQEMQRGGSVELSDILGPLRPKNYKTLECNEECKLLERNRRLAMALQIRNPDLPSKLQPNYSEFLRTYAKKDLPLVQMVHEKLTELVKLAKESKQKSRSYSFPIMNREKRTVVQEMCHMFGVEAVAYDAEPNRNVVATADRFTSWLPSMSLMEVLQRENGQRRIVVPNLNAWGRPSTASSSRATNSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00109517; iTF_00096751; iTF_00108063; iTF_00094176;
- 90% Identity
- -
- 80% Identity
- -