Acou001357.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles coustani
Gene Symbol
stc
Assembly
GCA_943734705.2
Location
OX030900.2:4996645-4999780[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.9 1.8e+04 -4.0 1.6 15 19 307 311 306 311 0.81
2 16 0.067 6.4e+02 0.6 0.4 4 10 340 346 339 346 0.95
3 16 8.1e-06 0.077 13.1 17.6 3 19 353 369 346 369 0.84
4 16 1.2e-06 0.011 15.8 12.2 1 18 405 422 405 423 0.93
5 16 0.64 6.2e+03 -2.5 5.3 10 16 430 436 427 442 0.78
6 16 1.1e-10 1.1e-06 28.6 10.6 1 18 463 480 463 481 0.98
7 16 2 1.9e+04 -4.2 0.7 12 16 513 517 512 518 0.74
8 16 0.0011 10 6.3 20.3 1 19 522 544 522 544 0.86
9 16 0.011 1.1e+02 3.1 6.8 1 11 584 594 584 595 0.94
10 16 0.57 5.5e+03 -2.4 1.0 4 10 599 605 598 605 0.90
11 16 5.4e-09 5.2e-05 23.3 18.6 1 18 611 628 611 629 0.98
12 16 1.4 1.4e+04 -3.6 0.5 6 10 658 662 657 662 0.80
13 16 2 1.9e+04 -4.3 8.1 10 18 676 685 665 686 0.87
14 16 2.7e-05 0.26 11.5 11.8 1 16 722 737 722 747 0.88
15 16 1.6e-06 0.015 15.4 12.8 1 19 754 773 754 773 0.97
16 16 0.52 5e+03 -2.2 0.7 7 12 788 793 782 793 0.68

Sequence Information

Coding Sequence
ATGGCATCGGGTAGTGAAAACGGTGCTTCAACTGGAGGAAGCGCCGCTTTCAATGAATTTGTGTCCCAGTTCAACGCTCGCTTAGAGCTACAGTATTTCCCACCGACCAGCAACGGCCAGCAGCCTGCCTCGGGCGCGGCGCCACCACCGTTTTCGCCTTATGTGATCGCTTCCAACCTTACACCGACGGCGGCCGAATTTGTGCCCCGTAAGTATCAATCCTCCTTTGCCACGCCGCAGGCAGCTCCGTTGGAATCGTACGTCCTGGCAACCGCTCCGCCGGTGTTCAACAATGTTTGCGAACGGCCTACCTCCTCGGCCATCGATCGAGAGGATCGAGAAGAAAATGGTCGCGCGGGCCCATCCAACCATTTGCATGGTTCCGGTCGGGCCGGTTTCGGTGTTGGCAGTAGTCGCCCGAGACGCAACGAAAGTCTGAAACCGCGCAATGGTTGGCACACCCGGGACGATCGTCCCGTTGGGCGTGGGAAGTGGAAGGCAAATCAACCGATACCGGGAAGTGGACGACTGCAACGGATGCACGaccacgacgatgacgacgatcgTTCGTCGACAATGAATGGAGAAAGCGCATCATCGTCGCGTTACGCCAGCGGAAGACATCAAAGGGGAAATCAAAGGACACTGCACCACCATCATGATCAAGATCGTCTAGCGCAAAACGTTCCCGCTGCCCCCGCGGTCGATGAGAACCTGGTTAAACCGCTTTCGAAGTGTTCACAGCGGGAAAAATTGATGCGCGAAATTGAATGCTACCGGCTGGAGTGTTTGGTGTGCTGCGAGATCGTTAAGCCGATGCAATCGACGTGGTCCTGCGGGAACTGCTACCACATACTGCATCTTACGTGCGTCACACGTTGGGCGACCAGTTCGCAGTCGGACGATGGAAGCTGGCGCTGTCCGGCGTGTCAGAACGTGCTGAAGACAGTTCCCCGCGAGTACCTCTGCTTCTgtgggaaggagaaaaatccCACCTACAATAGGGAAGATCTGGCGCACTCCTGTGGCGAGGTTTGCGGTAGGCGAGACTTTTGCGAGCACCCCTGCACGTTGCTATGCCATCCTGGGCCTTGTCCGCCGTGTCAGGCGTCGGTGCAGCGTCGTTGCGGATGTGGTAGGCTGGAGAAAGCGCTCCTGTGCAGCAGGAAGGAGGATTTGCTGTGTGACGCGACTTGTGATAAGGCGCTGAACTGTGATCGACATCGGTGCGCGAAACGGTGCCACGGTGGAGACTGCGATCCGTGTGAAGAGCAGGTCCAGCACAATTGCCACTGTGGCAAGTGCGACCGAATGGTGGCGTGCACGAAAGGAAACCTGGAGAAAACGGTCTACGGATGCGGTGCGGTTTGTGATCGTCCGTTGAGCTGCGGGAACCATCGTTGCGAACTGCTGTGTCATGAGGGCGATTGTACTCCCTGCATGGACCGCCCCGAGGTGGTGCTTAGTTGTCCGTGCGGTCGACAGCCCATCGAGGCGGGTAGTAGAACGTCCTGCCTTGATCCCATCCCAACTTGCACGGGGAACTGTGGGAAGAAGTTGGCGTGCGGTCCGCCGGGGGCACATCATTGCTGTGACGCACGCTGCCATCGGGGTGAGTGTCCACCGTGCAAAAAGTCCACCACCGTCAAGTGTCGCTGTGGCAACATGGACCAACCGATGAAGTGCAAGGACCTTACGACACGGGCGGACGATGCGCGTTGCAAAAAACGTTGCGTCCGCAGGAGGAGCTGCGCGAAGCATAAATGCAACCAACTGTGCTGCATCGATTTTGATCACATCTGCCCGAAAACGTGCTCCCTGCCGCTGTCCTGTGGGCGCCATCGGTGTGATAAACCTTGCCACAAGGGCAACTGCCAGCCGTGTCACCGGGTTTCGTTCGACGAGCTGACGTGTGATTGTGGCGCCAACATAATCTACCCACCGGTGCCTTGCGGGACCAAAAAGCCGGCCTGCGATCGACCCTGCGCTAGGCGGCACGTTTGCGATCATCCCGCGCTTCACAACTGCCACTCGGAAGCGGAGTGTCCACCGTGTGTTGTGCTAACGGCAAAGTATTGCTTCGGCCAGCACGAACAGCGTGCGACTATTCCGTGCTATCAGCAATCGTTCAGCTGTGGTATGCCTTGTGCGCGACCGTTGTCCTGTGGGCGACACAAGTGTATCCGGGCATGCCACGAGGACAGCTGCCAACAGGACGGAGTGGTGTGCAAGCAAAGCTGCACCGCAACGAGGGAATCGTGTGGGCACCTCTGTAATGCAACCTGCCACGAAGGTGAATGTCCGGATACGCCCTGCCGTGTGATGGTCGATGTGACATGCGAGTGCGGTAACCGGAAGCAGCAGCGCTCGTGTCACGATTTTTCCAAAGAATATCGGCGCATTGCATCGACACAGCTGGCGTCGTCCGTGCAGGAAATGCAACGCGGAGGATCGGTTGAGCTGAGCGACATTTTGGGCCCAATCAGACCGAAAAACAATAGAACCCTTGAATGTAATGATGAGTGCAAGCTCCTGGACCGTAACCGAAGGCTCGCATTGGCACTGCAAATTCGCAACCCCGATCTAACCTCAAAACTGCAGCCAAACTACTCGGAGTTCTTGCGCAGCTACGCCAAGAAAGACCTGGCCCTGGTGCAGATGGTACACGACAAGCTGACCGAGTTGGTCAAGCTGGCGAAGGAAAGCAAGCAAAAGTCTCGCTCGTACTCGTTCCCGGTGATGAACCGAGAGAAGCGCTCGGTCGTGCAGGAAATGTGCCACATGTTTGGCGTCGAAGCGGTTGCATACGATGCTGAACCGAATCGGAATATCGTGGCTACTGCGGATCGGTTTACGTGCTGGCTTCCCAGTATGAGCTTGATGGAGGTTTTACAGCGGGAGAACGGTCAGCGGCGCATCGTCGTACCGAATCTTAATGCCTGGGGACGACCGTCTGGTGCGTCGGCAGCGTCAAGCAGCAAATGA
Protein Sequence
MASGSENGASTGGSAAFNEFVSQFNARLELQYFPPTSNGQQPASGAAPPPFSPYVIASNLTPTAAEFVPRKYQSSFATPQAAPLESYVLATAPPVFNNVCERPTSSAIDREDREENGRAGPSNHLHGSGRAGFGVGSSRPRRNESLKPRNGWHTRDDRPVGRGKWKANQPIPGSGRLQRMHDHDDDDDRSSTMNGESASSSRYASGRHQRGNQRTLHHHHDQDRLAQNVPAAPAVDENLVKPLSKCSQREKLMREIECYRLECLVCCEIVKPMQSTWSCGNCYHILHLTCVTRWATSSQSDDGSWRCPACQNVLKTVPREYLCFCGKEKNPTYNREDLAHSCGEVCGRRDFCEHPCTLLCHPGPCPPCQASVQRRCGCGRLEKALLCSRKEDLLCDATCDKALNCDRHRCAKRCHGGDCDPCEEQVQHNCHCGKCDRMVACTKGNLEKTVYGCGAVCDRPLSCGNHRCELLCHEGDCTPCMDRPEVVLSCPCGRQPIEAGSRTSCLDPIPTCTGNCGKKLACGPPGAHHCCDARCHRGECPPCKKSTTVKCRCGNMDQPMKCKDLTTRADDARCKKRCVRRRSCAKHKCNQLCCIDFDHICPKTCSLPLSCGRHRCDKPCHKGNCQPCHRVSFDELTCDCGANIIYPPVPCGTKKPACDRPCARRHVCDHPALHNCHSEAECPPCVVLTAKYCFGQHEQRATIPCYQQSFSCGMPCARPLSCGRHKCIRACHEDSCQQDGVVCKQSCTATRESCGHLCNATCHEGECPDTPCRVMVDVTCECGNRKQQRSCHDFSKEYRRIASTQLASSVQEMQRGGSVELSDILGPIRPKNNRTLECNDECKLLDRNRRLALALQIRNPDLTSKLQPNYSEFLRSYAKKDLALVQMVHDKLTELVKLAKESKQKSRSYSFPVMNREKRSVVQEMCHMFGVEAVAYDAEPNRNIVATADRFTCWLPSMSLMEVLQRENGQRRIVVPNLNAWGRPSGASAASSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00106152;
90% Identity
iTF_00108063;
80% Identity
iTF_00109517;