Basic Information

Insect: Anopheles plumbeus
Gene Symbol: -
Assembly: GCA_034621735.1
Location: JAOEFI010000006.1:15372766-15382255[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2 5.5e+03 -2.3 0.0 15 30 68 83 63 85 0.83

2 9 0.0017 4.7 7.5 0.1 21 43 102 124 95 133 0.86

3 9 0.0034 9.3 6.5 0.3 23 47 132 156 128 163 0.84

4 9 0.0077 21 5.4 0.2 23 48 160 185 156 190 0.85

5 9 0.006 16 5.8 0.1 23 52 188 217 184 218 0.86

6 9 0.03 81 3.5 0.0 23 51 216 244 213 247 0.85

7 9 0.056 1.5e+02 2.7 0.0 21 45 242 265 240 270 0.87

8 9 0.00012 0.34 11.2 0.1 23 45 272 294 270 299 0.91

9 9 3.9 1.1e+04 -3.2 0.3 33 45 520 532 518 537 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2	5.5e+03	-2.3	0.0	15	30	68	83	63	85	0.83
2	9	0.0017	4.7	7.5	0.1	21	43	102	124	95	133	0.86
3	9	0.0034	9.3	6.5	0.3	23	47	132	156	128	163	0.84
4	9	0.0077	21	5.4	0.2	23	48	160	185	156	190	0.85
5	9	0.006	16	5.8	0.1	23	52	188	217	184	218	0.86
6	9	0.03	81	3.5	0.0	23	51	216	244	213	247	0.85
7	9	0.056	1.5e+02	2.7	0.0	21	45	242	265	240	270	0.87
8	9	0.00012	0.34	11.2	0.1	23	45	272	294	270	299	0.91
9	9	3.9	1.1e+04	-3.2	0.3	33	45	520	532	518	537	0.83

Sequence Information

Coding Sequence: ATGTTCTACCCGATGCAAACGACATTCGAAGATGGTGAAATCGAGCTGGGACGCACGGAAATGCTCAACCACGATCAATTGACTGACAATAAGCACTCGTTGGCCTTGTCCCTCTCCCTGGGCAATACGCTCATCAATCTCAACAAAATCAAGTGTCCACAGTGCCGGAAGcgTTTTGATACAGTGGAAGAGATGCAACAACATCGGTCGAAGCATTTGACGGAGAACAAATTTAAATGCGAAATTTGTAGTAAGGAATTTCCCAGCCATAGTTCCATGTGGAAGCACACCAAGGCTCACACTGGCGAAAGACCTTTCGTGTGTCAGATATGCAACAAGGGCTTCACTCAACTAGCCAACCTCCAACGACATGATCTCGTTCACAATGGACTAAAACCCTTCAAGTGTCCGATTTGCGAAAAGTGTTTTACCCAACAAGCAAACATGCTAAAACATCAACTACTCCATACCGGACTTAAACCATACAGATGTCCCGTGTGCCAGAAAGCATTTTCGCAACACGCAAACATGGTCAAACATCAAATGCTTCATACAGGTCTCAAGCCATACAAATGTCCTGTTTGCGAGAAGGCCTTCACTCAACAGGCCAATATGGTGAAACACCAAATGTTGCATACCGGAATCAAACCATACAAATGTCCAACCTGCGACAAAGCCTTTGCCCAGCAGGCCAATATGGTGAAGCATCAGATGCTCCATACCGGAGAGAAACCGTTCAAATGCAAAAGCTGTGATAAGGCTTTCTCGCAACGTGCCAATTTAAAGAAACACGAAATGGTACATCTCGGCATTCGACCACACACCTGCCCGCTCTGCACGAAGTCCTACTCGCAGTATTCGAACCTGAAGAAGCATTTGCTCGTTCATCAGAAGCAGGCgctcaagcagcagcagcaaaacggcCAAGTGATGGTAATTCTCTATAACTGCCAAACGTGCAAGATGCAGTTCGAGGACATCATCGAGTTCGAACGCCACACAAAGCAATGTGATATCAAGCACAGCGTGAAGCTGGAAACGATCAAGAGCGAGGTCGACATCGATGGCAGCTCCAGCTCGGGCATGCAGCAGCACCTCGCCGGGGCCACCAACGGCACCAATGGCAATGCTCTCAACGTTagccagcagccgcagcagcccCCGACGCCGATGCATCTTCCGTCGGCCATCCTCACCTCCGTCATCTCGTCATCGATCGGTGCGAATGTGACCGCGCACAACCTCACACCGTCGGCCCATGCCTCGCACGTTGCTCACGTGACGGCCAACGGGGGCATTCTCTCCGGCATACCTGCGGGGCATCCGCatgcccagcagcagcacactcCGCCGGGTGTCACCCTGTCCCAGCACCTTGCCGCTCAtgcccaacagcagcagcagcagcaacagcagcaacaacagcagcagcaacaacagcagcaacaacaacaccaacaacaagctcaccagcagcagcagcaagctcaccagcagcagcagcagcagcaaccgcagcagctcTCACCAGTTGGTggtggccaccagcagcatttggtgctgcagcagcagcacaatctACCGATTCATCTTCAGCAGCAACTATCGCACCATCTGATCGCGTCGCATCTCCCGCACCATCAGGATCACTCCGGTCCCGGTGACCTGCACCATCAGGTGAACTTCCATCCGCACATCTCTCACCTGCCGAACTTATCGCACAAGATCCTATCCCCGCTGTTCCACATTCCGCcgttcaacaacaaccacagcaCATAA
Protein Sequence: MFYPMQTTFEDGEIELGRTEMLNHDQLTDNKHSLALSLSLGNTLINLNKIKCPQCRKRFDTVEEMQQHRSKHLTENKFKCEICSKEFPSHSSMWKHTKAHTGERPFVCQICNKGFTQLANLQRHDLVHNGLKPFKCPICEKCFTQQANMLKHQLLHTGLKPYRCPVCQKAFSQHANMVKHQMLHTGLKPYKCPVCEKAFTQQANMVKHQMLHTGIKPYKCPTCDKAFAQQANMVKHQMLHTGEKPFKCKSCDKAFSQRANLKKHEMVHLGIRPHTCPLCTKSYSQYSNLKKHLLVHQKQALKQQQQNGQVMVILYNCQTCKMQFEDIIEFERHTKQCDIKHSVKLETIKSEVDIDGSSSSGMQQHLAGATNGTNGNALNVSQQPQQPPTPMHLPSAILTSVISSSIGANVTAHNLTPSAHASHVAHVTANGGILSGIPAGHPHAQQQHTPPGVTLSQHLAAHAQQQQQQQQQQQQQQQQQQQQQHQQQAHQQQQQAHQQQQQQQPQQLSPVGGGHQQHLVLQQQHNLPIHLQQQLSHHLIASHLPHHQDHSGPGDLHHQVNFHPHISHLPNLSHKILSPLFHIPPFNNNHST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00103817;
90% Identity: iTF_00109292;
80% Identity: -