Aplu000218.1
Basic Information
- Insect
- Anopheles plumbeus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_034621735.1
- Location
- JAOEFI010000001.1:1868354-1873973[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.44 8.4e+03 -4.2 0.8 46 84 174 212 165 217 0.42 2 3 1.3e-108 2.5e-104 348.9 32.7 1 299 265 565 265 566 0.95 3 3 0.054 1e+03 -1.2 2.6 210 245 585 619 568 638 0.60
Sequence Information
- Coding Sequence
- ATGAGCACCACGGCCACGGTACGCCTGGAGCTGCCGGCCGATGACGCCAGTGACAGCAGTAGCGTGGGTGACATTTACGAGCTGGCGCACAGTGAACCCACTCCCGGATCGCCCGCATTCGAGGATGCTCATAGGAATGACGGCAGCGGCGGGGTGACCGTGCGCGCGCCGTTTTGCGCCAAACGTATCGGCGgcgcgggtggtggtggtggtggtgttgatggtggtgatggtggtgatggtggtgatgtcCCAATCGTGGACATCAACCGCAATCGGATCCCGCCCGGGCTGACCTCCGACATCTCCACCGGTGTCGACGACGATCGTCCGGATCGATCGGTGACCAGCGTGTACAGCGATGCCGGCGTTGACTGCGACAGTGGCAacagcaccggcggcggctttGAACACCTGGGGGACGGGGAAATGCTCTGCGGGGGTGCAGTGGTGGACGGTTGCCAAACGGCGAGTAATGCATGTGAATCACCTTCACccgatcagcagcaacagcgggaGCATCGAGAGGCCGCTGCCCCACGGACACCGACAGCCGGCGAGGAGCTCTACGACAGGAGCGACGATAgtcgcaacagcagcagtctgCGCAGCGGCAGCTACCACGACTCCTCGTCCGTGCACGAGCCGCCGGATCAGCAGCACGCTCACCCGCACCATCCGTTCGAGCCGCACCGACAGTTCCACCGGCTCTCGGTTAGTCACACCGGCGACGAGTTCAGCTCCGAGGAGGACGATGCGTTCGTCGAGCTGCTTGAGAGAGCGAATGACATCGCGGAAGCCCGGTTGGCAGCAAGGCGGCAGGCCCGGGCGGAAGCGCGCGAGATACGCATGCGGGAGCTGGAGCGCCAGCAGAAGGAACTGGAACAGAATGCGGACCGGGTGTTCGATCTGCAACAGCAGTCGATCGGGCTTTCCGGCGAGCCGGTCAGCCTCGAACGGACCCCGACCACACGCTCTACCCGCATGATGGGCCAGGGGTCCgcgtcgtcggcggtggcgcgCGGCAGTGCCCTCTCGTCCCGCCGCAACTCGGAAGACTCGTTGGAGGAGGAGGCCCGCAGCTTACGCGATCTACGACACGAGATGAAGGACGTGGAAGAGCGGTTCCGGAAGGCGATGATAGCGAACGCCCAGCTGGACAACGAGCGGTCGTCGCACAACTACCAGATACAGCTGCTGAAGGACAAactggaggaggtggaggagtCGCACGCCCAACTGCAGCGCGAGTACCGGGAGAAGTGCCGCGACCGGGACGCGCTCAAGCGCAATAACGACAAGCTCGGCGAGGAGCTGAAGCTTGTCCAGGGCCAGCTGCAGGAGCGGGACGGGCTAATAGAGCAGTACGGGCTGGTCATAGTGACGGTGGAGAACGAGGACGGTACCGATGCGCATCGCGCCCTAGTCACAGCGGGCAACGCACAGTTGCTCAAATCCGTACCGGGTTCGTTAgACGTAAGACTGAAGAAGTTTGCGGAGGAAAAGCAGGAACTACAGAGCGAGCTGCAGTCGCTGCAGCAGAAGCTAAACGACTTCAAGAGCAAGGGCCGCCGGAACACCACCATGAACGGTGTCACCCtggccgacgacgacttcgaggATGCGCAACGTGAAGCCAACAAGCTCATCACCGAGTATAAATACAAACTGCAGAAGGCGGAGCAGGAGATCGCGAACCTGCAGGCCAGCCTGGCCCGGTCGGAGACGCAGGTGATCCGGTACAAGAGCACCGCCGAGGCGTCCGAGAAGGCCGAGAGCGACCTGAAGATCGAGCGGCGAAAGCTACAGCGCGAGAACCGCGAAGCGATGGACCGGCTGGAGGAACTAGAAACATCGAACAACCATCTGCTGAAGCGGCTCGACAAGCTTAAGAACGTGAAGAGCGCCATCCTGAAGGACATATGA
- Protein Sequence
- MSTTATVRLELPADDASDSSSVGDIYELAHSEPTPGSPAFEDAHRNDGSGGVTVRAPFCAKRIGGAGGGGGGVDGGDGGDGGDVPIVDINRNRIPPGLTSDISTGVDDDRPDRSVTSVYSDAGVDCDSGNSTGGGFEHLGDGEMLCGGAVVDGCQTASNACESPSPDQQQQREHREAAAPRTPTAGEELYDRSDDSRNSSSLRSGSYHDSSSVHEPPDQQHAHPHHPFEPHRQFHRLSVSHTGDEFSSEEDDAFVELLERANDIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDLQQQSIGLSGEPVSLERTPTTRSTRMMGQGSASSAVARGSALSSRRNSEDSLEEEARSLRDLRHEMKDVEERFRKAMIANAQLDNERSSHNYQIQLLKDKLEEVEESHAQLQREYREKCRDRDALKRNNDKLGEELKLVQGQLQERDGLIEQYGLVIVTVENEDGTDAHRALVTAGNAQLLKSVPGSLDVRLKKFAEEKQELQSELQSLQQKLNDFKSKGRRNTTMNGVTLADDDFEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEASEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSAILKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -