Aplu001715.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles plumbeus
Gene Symbol
PAXBP1
Assembly
GCA_034621735.1
Location
JAOEFI010000003.1:12478824-12483438[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-36 6e-32 111.4 0.1 3 271 680 889 678 891 0.95

Sequence Information

Coding Sequence
ATGTCGCTGTTccggaaaccaaaaaaagtcATTCAGCGACGCGTTTTCTGCGgcatcgacgacgaggacgacgagaaTAACCATGCGAGTAAGGACATGCCGACAACGGTCGACAATGGAAATGGCACCGGCGGCGACCGTTACGGGTCAGTTGAAGCGAGCCCCGCACCCGAAGGACCTATGGTGACTTCGGGGTCATCCGCAGGGTTAGCGTCTTCGGAACGCAAGAGGAAAGATCATCGTGCAGAATCGAAATCGGAGGTCTCCAAAGGAGGTTCCTCGTCTACAAAATCGAATGCGATCACCAAACCCTCTTTACTTAGTTTCGACGACGAAGAGGAGGGTGAAGTCTTCCAAGTGAAGAAGTCCTCCCACAGCAAGAAGGTTATGAAGTCGCTCGATAAGGAAAGACGTCGGAAGCGACACATGGAAAAGAGCAATGGCAGCAGCACGGCTATGACCTCCTACTCGTACGCCCCGGAGCATGGCGGCAAAGCGAACGCATCCCAGCGCAAGCAGTTTGTCTCCTCTTCTCCTCCCTCCACCAGCTTGTCATACGACAACGACAGTAATGATaagataaaaagagaaaagtgtgaaaattCTAGCTCTAATATCCAAACAGAAATACGCACAGACGACTTTGTGCTGGTGGTCAAGAAATCGGATCCTGAAAACCTGATACTGAACGGCCGGGCGGCACTTTGCGCCGGGCGAAATGATATGTCGTCGGAGGACGAGACGAACGAGGACGCCGGCAGTAGCGAGCGAGGGCATCACCATCGGTTTGCAAAGCCGCAGGATAACTTCAAAATGTGCCTCGAGAACGGCGTCATTCCGGATGCGGCCATGATTCACGCTGCCCGAAAGCGGCGCCAGAAGGCACGTGAACAAGGCGATTTCATTCCAGTGGAAGAGCCGAAAGAGGAGAAGAGCAAGAAGCGTACCGTGCAGGaggacggcgatggcgacggttCGGATGAGGATGACGATCGGATCGACATGTCCGCCATCACCGGTGCCAAAGAGCGCGAGGAGCGTCGCGAGCAGTTTTATGCAGTACAGCGCGAAGACTCGGACGCGGAGGATTCCGACGTGGAAAcgaaggaatgggaaattcAGCAGATTCGCAAGGGCGTCACCGGTGCTCAGCTAGTTTCCGCACAGCAGGAGTCGGTTATTTCGCAGTACTTAATTAACAGCGGCTTTAGTGGGGCGTTTCACAAGTCGTCTCCCTCGGGGATGATGgtggatgacgacgacaacgacggttCCAGTATGCGCGCCCTGTCTACGGCGGCTCTCCTGGAGCAGGCTTACGCCGCATCCAGCGGTGCCTCGCTCCACTCCAGTCGAAGTAGTGGCAAACGAACCATTGcaccgggcggcggtggcggtttgGCTAAGTCTTCCAGCGACTCGAAACCGACTGGACCCCGGATGCCGCGGCAGATTTTGACGCAGCTCAGCGAACGCTTCCGTACGACGTTCGAGCTGAACCAgaagcacgacgacgacatcgagcACATTACGAAGGAAGTCAAGCTGCTGCAGATGGACCATTTGTCCTGCGAGCAGAAGGGACCGGTGGCGGCCGCCAAGTATCGCTTCTATCAGGAGTTTCGCTGCTACGTGACGGACTTGGTCGAGTGCCTCAACGAAAAGGTCCAACTAGTAACGACGCTAGAGCAGCGGTCGCTGCAGCTGATGGGGAAACATTCGGCAATGTTGATTGAACGTCGTCGCCAGGATGTGCGTGACCAAGTGAAGGAAGTAACCGATGCTAACAAACCGATGAAGCGATTGCCAGATGATCAGGAGCGCATTAGACGGGCCGCGGAACGAGAAGGACGACGCACACGTCGTCGGCGGGatcgggagaaaaacgaaacctccGACAGCCACCTGGACGGGATGTCCAGTGACGACGAAATCCCGGACATGGAAGCCGCCCGCTACAAAGCCTCCCTGCAAACGGTCGAACTGGAGACACGGGATGTGTTTTCCGATGCAGCCGAGGAGTACTGCTACATCGGGGCAATATTGGCCAAGTTCGAAACGTGGCGAGACCACGACATGCCTGCGTACAGTGATGCCTACGTTAGTCTGTGTCTACCGAAAATATTGGGGCCATTGATTCGGCTTCAGCACGTCACCTGGAACCCACTGCTAGTGGACACTGTCGGCGAGTTCGAGAACGAGGAATGGTACAgggcagttgttttctttggaaGCAGCTCCACATCCACGGAAGAGGACCTGTTGGAGGATCCGGACGTGCGGCTCATACCGACACTGGTGGAGAAGATATTTCTGCCCAAGCTGACGACACTGGTCGAGCAGTGCTGGGATCCGCTTTCGACTACGCAAACCTTCCGGCTGGTTCGTCTGTTGAAGCGTTTCGTGCGGGACTATCCTTCGCTGCGGACCACCTGCAAACCGCTCCGGGCGCTCTTCCAAGCCATCCTAGACAAGATGAAGCTGTCGATCGATAATGATGTGTTTATTCCGATCTTCCCCAAACAaGCACAGGAAGCCAAGTCGTCCTTCTTCCAGCGGCAGTTCTGCAGCGGGTTGAAGCTGTTCCGCAACATCACCAGCTGGCAGGGCATCCTGGCCGATTCGGCACTGAACGAGCTGGCCATCGGTTCACTGCTGAACCGCTACCTGCTCAACGGGATGCGCGTCTGCTCGCCGATCGATGCGGTCGGAAAGGCTTCAACCATCGTGTACACGTTGCCGCGCGTCTGGCtcagctcgtcctcgtcgatcGTGCAAAGCTTGGATCAGTTCGTCGCCATGCTGCGACATCTGCAATCTCAGCTCGATCCCATCGTCCCTCACAATGGggAACTAATCGAAAAGATACGCAACATACTGTCCAGCTTACACGTGGTTTCAACGTAG
Protein Sequence
MSLFRKPKKVIQRRVFCGIDDEDDENNHASKDMPTTVDNGNGTGGDRYGSVEASPAPEGPMVTSGSSAGLASSERKRKDHRAESKSEVSKGGSSSTKSNAITKPSLLSFDDEEEGEVFQVKKSSHSKKVMKSLDKERRRKRHMEKSNGSSTAMTSYSYAPEHGGKANASQRKQFVSSSPPSTSLSYDNDSNDKIKREKCENSSSNIQTEIRTDDFVLVVKKSDPENLILNGRAALCAGRNDMSSEDETNEDAGSSERGHHHRFAKPQDNFKMCLENGVIPDAAMIHAARKRRQKAREQGDFIPVEEPKEEKSKKRTVQEDGDGDGSDEDDDRIDMSAITGAKEREERREQFYAVQREDSDAEDSDVETKEWEIQQIRKGVTGAQLVSAQQESVISQYLINSGFSGAFHKSSPSGMMVDDDDNDGSSMRALSTAALLEQAYAASSGASLHSSRSSGKRTIAPGGGGGLAKSSSDSKPTGPRMPRQILTQLSERFRTTFELNQKHDDDIEHITKEVKLLQMDHLSCEQKGPVAAAKYRFYQEFRCYVTDLVECLNEKVQLVTTLEQRSLQLMGKHSAMLIERRRQDVRDQVKEVTDANKPMKRLPDDQERIRRAAEREGRRTRRRRDREKNETSDSHLDGMSSDDEIPDMEAARYKASLQTVELETRDVFSDAAEEYCYIGAILAKFETWRDHDMPAYSDAYVSLCLPKILGPLIRLQHVTWNPLLVDTVGEFENEEWYRAVVFFGSSSTSTEEDLLEDPDVRLIPTLVEKIFLPKLTTLVEQCWDPLSTTQTFRLVRLLKRFVRDYPSLRTTCKPLRALFQAILDKMKLSIDNDVFIPIFPKQAQEAKSSFFQRQFCSGLKLFRNITSWQGILADSALNELAIGSLLNRYLLNGMRVCSPIDAVGKASTIVYTLPRVWLSSSSSIVQSLDQFVAMLRHLQSQLDPIVPHNGELIEKIRNILSSLHVVST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00096380;
90% Identity
-
80% Identity
-