Aplu007692.1
Basic Information
- Insect
- Anopheles plumbeus
- Gene Symbol
- bab1
- Assembly
- GCA_034621735.1
- Location
- JAOEFI010000006.1:15627584-15629881[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-18 2.3e-14 52.9 0.0 1 43 27 70 27 72 0.95 2 2 2.8 7.5e+03 -3.2 0.1 1 12 159 171 159 174 0.72
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACAGCCAGAACCTGATCCACCATCTGCGCTTTCGCGAGCGCGGCCCACTGAAGTCCTGGCGCCCGGAGACGATGGCCGAAGCCATCTTCAGCGTGCTGAAGGAGGGCCTGTCGCTGTCGCAGGCCGCGCGCAAGTACGACATCCCCTACCCGACGTTCGTGCTGTACGCGAACCGCGTCCACAACATGCTCGGCCCGTCCATCGATGGCGGCACCGACTTGCGGCCGAAGGGGCGCGGCCGGCCGCAGCGCATCCTGCTCGGCATCTGGCCCGACGACCACATCAAGGGTGTCATCAAGAGTGTCGTCTTCCGCGATGCCAAAGAAATGAAGGAGGAGCCCATGATGTACGGAAGACACTCTccttttccctttcaagaCAACAACCCGCTAGGCTACACCCCGACCGCGCCGAATGGCCAGCTGCCGGCCGCCGGCTCCGTGCCGGACGGCATGTCCCCCGACGCCCtgaccgccgccaccgtggcGGCCGTCCGCCAGCAGATGTGCAACATGGTGGCCGCCGCCCAGCACCACCCGGACGCGGCCAACCTGGTGGCGGCCGGCTTCAACCTGCCGGCCCACTGTGCGCCCCCGTCGAGCCTCAGCATCCATCCGGCGGCGACGGCCGTCaacgcagcagccgccgccgcagccgccgccgccgccgccgccgcggccacCGGTGGCCCGAGCAgtgggggcggcggcggctcgaGTGGCTCCATCCCGATTCCGAAGCTCGGCTCCCCGGCCGTCCCGTCCGCCGGCcacggcaacaacaacggcggctCGGGCGGCATCCAAATGCCGCGGCTGGGGTCGCCGGCCGGTTCGAGCGGCCTGGCCAAGGAGCACGACCTGCAGCATCACGGAGGCGGACACGGCGGAGGAACCGCTGCCGGCATGTCCAGAGGCACGCCGCCGGGAGTGCGCGAGCGAGCGGCCACGGCACGCGCCAGCGAGTCGTCGGGCCGCAGTTCCGCCGGCGGCCATCCGCACGGCAGCTCGCCGTCCAGCAGCGCGACCCAATCGGCgctcaaccaccaccaccaccagcagcaccagcagcagcagcagcagcagcaacaacagcaacaacagcaacaacagcagcagcagcagcaccaccaccagcaacagcaacagcaggcgcATCtgtcccaccaccaccaccaccagcaccagcatcaccagGCGTCGCACCACGGCCACGGgcaccaccatccgcaccacAACCCGCTCTCCCATCTGGTGGGGACCGGCGGGGCCGGCGGGCTGAGCATAACGAAGCTGGGATCGCCGGGCTCGGCGCACGACCTGCGCATCAGCAACAGCCCCGACGGCAGCCCGCTCGCGTCCCCCCTCGGGATGGGGCTGGAGCCGGCCGTCAACCTGGCGCTCGGGGGCGGCAGCCACACGCCGGACGACGTGCGGGGTCTCGTTCCGCCGCCGTACGGCAGCAAGCCCCCGTCCCGGGGCCCGCCCTCCGGGTACCCGGGCAGCGCGTCCCCGCCGCGGCCGGAGCATCTCTTCCAGGACCAGGACCTCGCGGCGCTGGTGGCCACGACGCGCGCCTGCCCTCCGTCCCGCGTGCCCGACTACAGGGACAGCCCGGTGCGGCCGCCGGCGACGATCAAGGTGGAACCGTTGACCGAGTGTCGGGGCGACTAA
- Protein Sequence
- MWQKCWNSQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDDHIKGVIKSVVFRDAKEMKEEPMMYGRHSPFPFQDNNPLGYTPTAPNGQLPAAGSVPDGMSPDALTAATVAAVRQQMCNMVAAAQHHPDAANLVAAGFNLPAHCAPPSSLSIHPAATAVNAAAAAAAAAAAAAAATGGPSSGGGGGSSGSIPIPKLGSPAVPSAGHGNNNGGSGGIQMPRLGSPAGSSGLAKEHDLQHHGGGHGGGTAAGMSRGTPPGVRERAATARASESSGRSSAGGHPHGSSPSSSATQSALNHHHHQQHQQQQQQQQQQQQQQQQQQQQHHHQQQQQQAHLSHHHHHQHQHHQASHHGHGHHHPHHNPLSHLVGTGGAGGLSITKLGSPGSAHDLRISNSPDGSPLASPLGMGLEPAVNLALGGGSHTPDDVRGLVPPPYGSKPPSRGPPSGYPGSASPPRPEHLFQDQDLAALVATTRACPPSRVPDYRDSPVRPPATIKVEPLTECRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00109056; iTF_00096300;
- 90% Identity
- -
- 80% Identity
- -