Acou005047.1
Basic Information
- Insect
- Anopheles coustani
- Gene Symbol
- bab1
- Assembly
- GCA_943734705.2
- Location
- OX030900.2:57657010-57660217[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 2e-14 53.1 0.0 1 43 27 70 27 72 0.95 2 2 2.9 5.6e+03 -2.7 0.1 1 12 158 170 158 174 0.71
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACAGCCAGAACCTGATCCACCATCTGCGCTTTCGCGAGCGCGGCCCGCTAAAGTCCTGGCGCCCGGAAACGATGGCCGAGGCCATCTTCAGCGTGCTGAAGGAGGGTCTGTCGCTGTCGCAGGCCGCCCGCAAGTACGACATCCCGTACCCGACGTTCGTGCTGTACGCGAACCGCGTCCACAACATGCTCGGACCGTCGATCGACGGTGGAACCGACCTGCGGCCGAAGGGACGCGGCAGGCCGCAGCGCATCCTGCTCGGCATCTGGCCCGACGAGCACATCAAGGGCGTCATCAAGAGTGTCGTCTTCCGCGATGCCAAAGAAATGAAGGAGGAGCCCATGATGTACGGAAGACACTCTCCTTTTCCCTTTCAAGACAACCCACTGAGCTACGCACCGACCGCCCCGAACGGCCAGCTGCCGTCCGCCGGCTCCGTCCCGGACGGCATGTCCCCCGACGCCCTGACAGCCGCCACCGTCGCCGCGGTCCGCCAGCAGATGTGCAACATGGTGGCCGCCGCCCAGCACCATCCGGATGCGGCCAACCTCGTGGCGGCCGGTTTCAACCTTCCGGCGCACTGTGCCACCCCGTCTAGCCTGAGCATTCACCCGGCGTCGGCCGCCaacgccgccgccgcagccgccgcaGCCGCTGCGGCCGCCGGTGGACCGaacggtggtagtggtggtagtggtggggGCGGTGGAGTCTCCAGCGGATCCATTCCCGTGCCCAAGCTCGGCTCCCCGGCCGTCCCATCGGCCGGTCACGTCGGCAACAATGGCGGCTCGGGCGGTATCCAAATGCCGCGGCTCGGATCACCGGCGGGTGCGAGCAGTTTGGCCAAAGAGCATGACCTACAGCATCACGGCGGTCACGGATCGCTTTCCCGCGGAACACCGCCGGGAGTGCGCGATCGGGCGGCCACGGCACGAGCCAGCGAATCGGGACGCAGTTCGGCCGGCGGCCATCCGCACGGGGCGTCTCCGTCCGGCAGTGCGCCTCCGTCGTTCAATCACCACCCGTCGCACCTCtcccatcatcaccatcagcaccagcaccaggcGTCGCACCACGGCCACGGACACCACCACCCACACCACAACCCGCTGTCCCACCTGGTGGGGTCGGGCGGCGGGCTCAGCATAACGAAGCTGGGCTCACCGGGCTCGGCTCACGATCTGCGTATCAGCAACAGCCCCGACCCGGGCAGCCCGCTGGCGTCGCCCATCGGCATGGTCCTCGAGCCGGCCGTCAACCTCGCGCTCGGCGGCGGCAGCCAAACGCCGGACGACGTCCGGGGTCTCGTTCCGCCACCGTACGGCAGCAAACCGCCGTCCCGTGGACTCGTCACGTCTCCACCGCGGCCGGAGCATCTCTTCCAGGATCAGGACATCGCGGCACTGGTGGCGACAAGCCGAGCCTGCCCGCCGTCTCGCATCGCCGACTACAAGGACAGTCCGGTGAGGCCACCGCCCTCCATCAAGGTGGAACCGCTCACCGAGTGCCGGGGCGACTAA
- Protein Sequence
- MWQKCWNSQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKSVVFRDAKEMKEEPMMYGRHSPFPFQDNPLSYAPTAPNGQLPSAGSVPDGMSPDALTAATVAAVRQQMCNMVAAAQHHPDAANLVAAGFNLPAHCATPSSLSIHPASAANAAAAAAAAAAAAGGPNGGSGGSGGGGGVSSGSIPVPKLGSPAVPSAGHVGNNGGSGGIQMPRLGSPAGASSLAKEHDLQHHGGHGSLSRGTPPGVRDRAATARASESGRSSAGGHPHGASPSGSAPPSFNHHPSHLSHHHHQHQHQASHHGHGHHHPHHNPLSHLVGSGGGLSITKLGSPGSAHDLRISNSPDPGSPLASPIGMVLEPAVNLALGGGSQTPDDVRGLVPPPYGSKPPSRGLVTSPPRPEHLFQDQDIAALVATSRACPPSRIADYKDSPVRPPPSIKVEPLTECRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00105761;
- 90% Identity
- iTF_00109056;
- 80% Identity
- iTF_00109056;