Basic Information

Insect: Anopheles minimus
Gene Symbol: -
Assembly: GCA_000349025.1
Location: KB663610.1:2506290-2512991[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0047 0.27 11.3 4.8 2 23 347 369 346 369 0.95

2 11 8.2e-06 0.00046 20.0 2.1 1 23 374 396 374 396 0.98

3 11 2e-05 0.0011 18.8 0.5 1 23 402 424 402 424 0.98

4 11 1.5e-05 0.00084 19.2 0.9 1 23 430 452 430 452 0.98

5 11 9.5e-05 0.0054 16.7 1.1 1 23 458 480 458 480 0.96

6 11 2.2e-08 1.3e-06 28.1 1.6 1 23 486 508 486 508 0.99

7 11 4.5e-07 2.5e-05 24.0 0.3 1 23 514 536 514 536 0.98

8 11 2e-05 0.0011 18.8 0.4 2 23 546 567 545 567 0.97

9 11 0.0016 0.091 12.8 1.6 3 23 575 595 573 595 0.98

10 11 0.00037 0.021 14.8 0.3 1 23 601 623 601 623 0.94

11 11 2.3e-05 0.0013 18.6 2.5 1 23 629 651 629 651 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0047	0.27	11.3	4.8	2	23	347	369	346	369	0.95
2	11	8.2e-06	0.00046	20.0	2.1	1	23	374	396	374	396	0.98
3	11	2e-05	0.0011	18.8	0.5	1	23	402	424	402	424	0.98
4	11	1.5e-05	0.00084	19.2	0.9	1	23	430	452	430	452	0.98
5	11	9.5e-05	0.0054	16.7	1.1	1	23	458	480	458	480	0.96
6	11	2.2e-08	1.3e-06	28.1	1.6	1	23	486	508	486	508	0.99
7	11	4.5e-07	2.5e-05	24.0	0.3	1	23	514	536	514	536	0.98
8	11	2e-05	0.0011	18.8	0.4	2	23	546	567	545	567	0.97
9	11	0.0016	0.091	12.8	1.6	3	23	575	595	573	595	0.98
10	11	0.00037	0.021	14.8	0.3	1	23	601	623	601	623	0.94
11	11	2.3e-05	0.0013	18.6	2.5	1	23	629	651	629	651	0.99

Sequence Information

Coding Sequence: ATGGCTAACCTGTCGACCGATGCTAGAATGGAGGTAAAGCCATCGGCAAAACCATCAACGATGAAGATTGGAATATCGCGAACCCCGCGTGCATTGGCGCCTGTTAGTACCGATCCTAGAATTATCTACTTGGACCGTGTTTGTCGGACGTGTCTGAGCGAAAAGGACAAGAATCAGCTGAAGGATCTGTTCGAACTGAGCCTGGCAGAAACGATAATGAGTTGCACAAGCTTGACGGTTACTGAGTCCGATGGCCTCCCATGCCATATCTGCACGGACTGCTGTATGGAGCTGGAGCGTAGTTTTAACTTTCGGCAAATGTCCAAAGCGTCTGATGCAACGATACGATCGCTAATTGAAAAATCGGTCGTTATTAAGCAGGACAGTGAAACCAAGTACGAGGTGTTGAATGTGGTTCTTACCGACTCTGACGGTAACACGGAAACATCCGCCATCGTTGTACCGATAGAGGAGCTTCGCTTTCAGCTTATGAACGCAAACAACACGATAGTGGAAGCGAAAGCCGAGGGCAGTATTGCGAACCCAGTTCGGAAAGCAAGTCAAATGAATAGCGCAGTTTCAATCGAAACCGTTACCTGCGGAAAGGAGACAAGCGTTGGGGAGGAACATTCAGTAAATCCTAACGATCTTCTAAACGAGCCAACACCTACGTCATCCCCGAACAAGGAAATAGCGGAACCACCCCGAACGCAAGCGCTAAGGGAATCTACCATTCTTCGAAACCTGAAACAAGAGTTGTCCGAGTTTATTGGCAGCAACTGTACAGCCATTTCGAAAGAGGTTGAAATTGTGGATGAGAATGAGGACGATGAGCTTATCCATGTGGACTATCTAAAAGATGCGCTTACCGAGGAGTACATTCAGATAATGGAGACACAACTAGCGTCCGCAGTGGCTGGCAACAAAGAGGAACAGCTTGAGCAggaacatttaaacaatttgattCATGCGTCAATGGAAGCGGAAGAACCGCGCGACCGGCATAAACCAGATGACTGCCTTGAACGGGATACAACGCATTGCAAGATATGTGATGTCAAATTTAGCAAACGTAGACTGTACCGAAAGCACGTCAATCGAAAGCATTCCGAAAAACGCTTCGAATGCAACCACTGTCCAAGAAAATTTGCGGAAAAGTCCGTCCTCAAGAATCATATGCTGCGTCACACCGGGGAAAAGACGCACGTTTGCGATGTCTGTGACGCACGGTTCTACGAGAAGGCTTTACTGAACGTGCACATGCGAAGGCACTCGGGCCTACGGCCGTACGCTTGCGAGTTGTGCGACAAACGGTTCACTACTCGCAGCATTCTCAACACACACCAGAAAGTGCATAATGACCCAAGGCCCCACATATGCAACGTTTGCCAGAAGGGATTCAAATTGTCTTGGCAGCTAAAGGCACACAGTCGGGTACACACCAACGAAAAGCCGTTCGAGTGTCCGTACTGCCACAAACGGTTCAACCAAAACGGTAATTTGGTGGTGCACATACGTACCCATTCGGGAGAAAAACCCTTCAAATGCAAAATCTGCGATAAGGCTTATCCTAGCCAGGGAGAGCTAAGGGGTCACATGCGACAGCACACGGGAGAGGAAAAGGCCAAGAAAGTGGTGTGTACCATCTGCAACAAGGCGTTTTCTGCCAACCACGTGCTAGTAATCCATATGCGTACACACACCAAGGAAAAACCGTACGGTTGCACGGTCTGCGAGAAGCGGTTTTTGATGCGTGTGCATCTCACAGTCCATATGCGATCGCATACGGGCGAAAAACCGTTCGCTTGTGCGTTGTGTGAAAAAGCATTTCCTACCAATTATCAGTTGAAAATGCACAGCTACGTGCATACGGGTGAGAAGAACTACTCCTGTGATGTTTGCAACCGTAAATTCAGCAGCTCAGCCAATCGCAATACTCATCGGAAAACACACGATCGGAAGACAAATTAA
Protein Sequence: MANLSTDARMEVKPSAKPSTMKIGISRTPRALAPVSTDPRIIYLDRVCRTCLSEKDKNQLKDLFELSLAETIMSCTSLTVTESDGLPCHICTDCCMELERSFNFRQMSKASDATIRSLIEKSVVIKQDSETKYEVLNVVLTDSDGNTETSAIVVPIEELRFQLMNANNTIVEAKAEGSIANPVRKASQMNSAVSIETVTCGKETSVGEEHSVNPNDLLNEPTPTSSPNKEIAEPPRTQALRESTILRNLKQELSEFIGSNCTAISKEVEIVDENEDDELIHVDYLKDALTEEYIQIMETQLASAVAGNKEEQLEQEHLNNLIHASMEAEEPRDRHKPDDCLERDTTHCKICDVKFSKRRLYRKHVNRKHSEKRFECNHCPRKFAEKSVLKNHMLRHTGEKTHVCDVCDARFYEKALLNVHMRRHSGLRPYACELCDKRFTTRSILNTHQKVHNDPRPHICNVCQKGFKLSWQLKAHSRVHTNEKPFECPYCHKRFNQNGNLVVHIRTHSGEKPFKCKICDKAYPSQGELRGHMRQHTGEEKAKKVVCTICNKAFSANHVLVIHMRTHTKEKPYGCTVCEKRFLMRVHLTVHMRSHTGEKPFACALCEKAFPTNYQLKMHSYVHTGEKNYSCDVCNRKFSSSANRNTHRKTHDRKTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00103822;
90% Identity: iTF_00097924;
80% Identity: -