Amin011566.1
Basic Information
- Insect
- Anopheles minimus
- Gene Symbol
- FTZ-F1
- Assembly
- GCA_000349025.1
- Location
- KB663633.1:5194412-5315806[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.7 1.1e+04 -5.1 10.1 60 131 41 106 7 126 0.51 2 4 3 1.3e+04 -11.5 25.5 52 164 80 194 53 259 0.48 3 4 3 1.3e+04 -17.8 28.7 44 142 136 233 125 391 0.72 4 4 3.6e-92 1.5e-88 297.5 7.6 1 408 582 1020 582 1021 0.81
Sequence Information
- Coding Sequence
- ATGCACGAGGAAGCCTCCTCAACGGCTCACTCGTCCTCACCCAAAACGACCTCGAACATAGTGTATGCAAACGGTGGTGGAATGTTGCTTTCCACCTCACCCACGCCCGGTCCGGGAGTGGCctcgtcctcatcgtcgtcgtctaCATCGTCAGCATCGTCCTCGACATCCGTATCGTCCGCGGCCAACCTATACGATGTAGTAGTGCAGCAGGATTTGCTCCTTCCCAACAGTCATCACAGTGCGACCTTCCACGGTCATCAgcacctgcagcagcagcagcagcagcttcaccatcagcaacattCCCAGCAAGCGTTACAGCATGTAACGTCCAATTTAACAACAGTGGCTACCAAAATCATCGTCACCGGTGCAGCGGGTGGCGGTGGTATGCATCATGCCATGCAGCAACAGCTCCATTTGCAGCacgatcatcaccatcagccaCAGCATCATAACCATCACAACCACcttcatcaacaccatcaacaGACGCATCATCAGGTGCATCACGCACagacgcagcagcagcagcaacaacaccatcagCCAAGTTCCTCTACGAACGTGATCGTAACTGGCACGAATCACGGATCGTCACTACTCGTGCAAACTAGTTCCAGCGGTGTTTCGGACCTGCTGCTTGGTCAAGATCCCATTACTACCACGACGACGAATGCGGCCACGGCAGCCACACTGATTGCACTTACTCCCGATGACGTGGTAGAATCGGTGATTGACGGTCGGGTTGTAACAGCGACTGATGAAGATACGCTTCTCAGCAGCCTTGCCGGCACTGCTACTTCCTGCACGGCCGATGGTGTGGTGGATGAGGTAGAAGACCATGTCGTCACGATGGTTAGTGCCGATGGTACGCTACTCGGCTGCGGTGATCCTTTACAACCGacacatcaacaacatcatcagcagccCAGCTCTTCGTCCAGTATTACGATCGTCTCGGAAGAGTCCATATTACCGCTGGCCGTAGTCCCGACATCCTGCGTGCTGGCGGTAACCACACGATCACCAGCTTCATCCACGTCTTGCTCCTCCACTTCAGCGCCATCGTCGTCCTCTTCGTCGTCCTCATCCGGTGTATCCACGGTTCCGCTGTCCTCGTGCTCGATCGGTAGTTCCTCCAACACCGCTACGACGGCCGTTGCGGTTGCGTCCGTCGGGAGTAGCGGAGGGCATACCGGGTCAGGCTCCGGTGCCGGCGTCGTTATATCCGCCATGTCGATAAATAACGACGCGGCGCACCTAACAGAGGAGATCGAGATCAAGATCCCGGAGGAGGACGGTGGAAGTTATGCCGAGGATTCGGACGGCGGCGGTGTTGGCGGCGGTGGAGCCGGCGGTCCCTACCATCATGGGGGCAGCGATGGGagcggcggtggtggtggcggcggcaaTAACAGCAATGGCAGCGGTGGCGGCGGTCAAACGGCCGGAGGCCAAACGGCGGGCGGCACATCCtcggcagcggcagcagcagcggcagcctATCTGGCGATACCGGCCTCAGAGCTGTGCCCGGTGTGCGGCGACAAGGTATCCGGCTACCACTACGGGCTGCTAACGTGCGAATCGTGCAAGGGCTTCTTCAAGCGCACCGTCCAGAACAAGAAGGTCTACACGTGCGTCGCCGAGCGCCAGTGCCACATCGACAAGACGCAGCGGAAGCGCTGCCCGTACTGCCGCTTCCAGAAGTGTCTTGAGGTCGGCATGAAGCTGGAAGCTGTGCGAGCCGATAGGATGCGCGGTGGTCGTAACAAATTCGGACCCATGTACAAAAGGGATCGGGCGCGAAAGCTACAGATCATGCGCCAACGACAGCTCGCCATCCAGGCCCTACGGGGTTCGATCGGTGGTGGTGTCGGTATCGGGACGCTCGGTTCGGATGGGGTTTCGCCACAGTTACAAGGTTTGGATTACCACCAACCCTACTCGAGCATGCACATCAAACAGGAAATTCAGATACCACAGGTCTCATCCTTAACGTCATCGCCAGATAGTTCGCCCAGCCCAATTGCGATCGCCCTTGGACAGGTTAATCCGCAGACGACGATATCGCTCAGTAGCAGTGGAGTCGGCggcaatggtggtggtgggggcGGTGGaggcggcggtggcggtggtggaggggGAGGCGGTGGTAATAATGGATCCGGTGCCGGCACCGGCAGTTCCAACTCTAGCGCTACCAGCATCCAGAATCCACTGTCCGACTCGAAGCTGTGGATGAGCGCCAACTCGACGACCGCCTCGCCCCATTCGCTCAGTCCGAAGGCATTCAGCTTCGACACGAATCCCACCAGCACGGCCGATTCCGGCAATCCGGCCGACACCCTAAGGGTATCGCCGATGATCCGCGAGTTCGTCCAGTCGATCGACGATCGCGAATGGCAGACGTCGCTGTTCTCGCTGCTCCAGAGCCAGTCCTACAATCAGTGCGAGGTCGATCTGTTCGAGCTTATGTGTAAAGTGTTGGACCAAAATCTGTTCTCCCAGGTCGATTGGGCGCGAAATACGATATTCTTCAAGGATTTGAAGGTGGACGATCAGATGAAGCTGCTTCAGAACAGCTGGTCGGATATGCTGGTGCTCGATCACATACACCAGCGCCTGCACAACGGGCTACCGGACGAAACCACCCTGCACAACGGGCAGAAGTTTGATCTCTTAGGTTTAGGGCTGCTGGGCGTACCGAGCCTGGCCGAGCACTTTAACGAGCTGCAGAACAAGCTGCAGGAGCTCAAGTTCGACGTCGGCGATTACATCTGCATGAagttcttgctgctgctgaatcCCGATGTCCGGGGGATCACCAACCGAAAGACGGTCGTCGAAGGCTACGAAAACGTGCAGGCGGCCCTGCTGGATTACACGCTTACCTGCTACCCGTCGGTGCCTGATAAATTCAGTAAGTTGCTCAGTATTATTCCGGAGATTCACGGAATGGCAGCTCGGGGTGAGGAGCATCTGTACATCAAACACTGTGCCGGCAGTGCACCCTCCCAAACGCTGCTAATGGAGATGCTTCATGCCAAGCGAAAATGA
- Protein Sequence
- MHEEASSTAHSSSPKTTSNIVYANGGGMLLSTSPTPGPGVASSSSSSSTSSASSSTSVSSAANLYDVVVQQDLLLPNSHHSATFHGHQHLQQQQQQLHHQQHSQQALQHVTSNLTTVATKIIVTGAAGGGGMHHAMQQQLHLQHDHHHQPQHHNHHNHLHQHHQQTHHQVHHAQTQQQQQQHHQPSSSTNVIVTGTNHGSSLLVQTSSSGVSDLLLGQDPITTTTTNAATAATLIALTPDDVVESVIDGRVVTATDEDTLLSSLAGTATSCTADGVVDEVEDHVVTMVSADGTLLGCGDPLQPTHQQHHQQPSSSSSITIVSEESILPLAVVPTSCVLAVTTRSPASSTSCSSTSAPSSSSSSSSSGVSTVPLSSCSIGSSSNTATTAVAVASVGSSGGHTGSGSGAGVVISAMSINNDAAHLTEEIEIKIPEEDGGSYAEDSDGGGVGGGGAGGPYHHGGSDGSGGGGGGGNNSNGSGGGGQTAGGQTAGGTSSAAAAAAAAYLAIPASELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERQCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQIMRQRQLAIQALRGSIGGGVGIGTLGSDGVSPQLQGLDYHQPYSSMHIKQEIQIPQVSSLTSSPDSSPSPIAIALGQVNPQTTISLSSSGVGGNGGGGGGGGGGGGGGGGGGGNNGSGAGTGSSNSSATSIQNPLSDSKLWMSANSTTASPHSLSPKAFSFDTNPTSTADSGNPADTLRVSPMIREFVQSIDDREWQTSLFSLLQSQSYNQCEVDLFELMCKVLDQNLFSQVDWARNTIFFKDLKVDDQMKLLQNSWSDMLVLDHIHQRLHNGLPDETTLHNGQKFDLLGLGLLGVPSLAEHFNELQNKLQELKFDVGDYICMKFLLLLNPDVRGITNRKTVVEGYENVQAALLDYTLTCYPSVPDKFSKLLSIIPEIHGMAARGEEHLYIKHCAGSAPSQTLLMEMLHAKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099034;
- 90% Identity
- -
- 80% Identity
- -