Basic Information

Gene Symbol
ARID5B
Assembly
GCA_000349025.1
Location
KB663677.1:634985-702000[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-12 3.7e-09 36.4 0.1 2 89 677 757 676 757 0.89

Sequence Information

Coding Sequence
ATGGATATCAGGGTCGTTGGTGGACCCTGCGGCTACCATGGCTCGTACACGTTTTACAAGGGCGTTAAAGTAACGTTCGGCACGAAAGCAACGCACGAGTTGGGCAGTGGTTCCACGTCGTCCGCTTCGTCCGTGGCCAGCCCACCAGTGTCCGCACCCGGCAGCGGAAGCGTTGTTGGTGGCCCATCACACAGCACTGCCAACACTACCTCCACCGACAGCAGCAGTACTACCAGCAATGGCCACGATCGGCGACGCCCATCCGTCGACATTCCCAGTGAGGGTGGCAACACCGACTCACCTGATTCCTGCTCCGCGGCTCCTGCTACCCAGCAGAGAACGTCCTCGGTCGATGGTGATGCACCACCCACCGGGGAGGAACAGGATGAGCGGCTAAAGGACCGCAACGGTGGTTCGTCCACTGCCCAGTGCAATCAAACCAATGCCAACAGTACGCCGacaaccggcagcagcagtagtagtgggAGTAGTGGAAATAGTGGTAGCAACAGTACTAGTAATAGCAATAGCAATAGTGATAGTAACGGTAACAACGGTAGCTCTAATGCCAACGGTGGCACCAGTGGAAAGAGTCCAAATGGCAACCATGCGaagccaaaacaaacgcaacgaaaaTGTGTCAGCGAAAATGGCGTTGGCGGTGGAGGAGGTAGCGTTGGgggcagtgttgccagcaGCAACGGTACCAGCACCAGGGCcggcatcaacaacaaccttTGCCGATTAACGTCGGTCGATCGGGAGCAACACTACCGACCGCTGGTGCTGGCACTGGGCGACTGCATTCCGGTCCGACCGTGGTCCGACTCGCCGATCGCGTGCTTGGCCGAGCTGCGGATGGTCTGGAAGGATCGGAACGAGCAGTGTCTGCTGATAGCTCTACGGCTGTACTTTCTGCCGGAAAATACACCACTGGGCCGCAACTGTCATGGGGAGGACGAGGTACTTGCAATCTCGGACAAGGTGATACTGCGGGCAGAAGACCTCCTCAACTGGATCGACACCGAGCAGGAATGGAGCTGGGGCCTGCTAACGCTGTACGATGAACACAGTGCCAAGGATTGTCTCGGGATGACGCGCCATCTCAGCAAGAACTCATCGCTAGACTTTGGCGATGTGGATAAGGAGAAGCATTCAGGTGAAAACATTGTCTCGAGGGTGGCGGTGTTGAGCTTTTCAAGGTACTGTCGATATCGGGCATTGCTGAAACGGCTGGAAGGTGTCCAGCATGCGTGGTTACGGAATGCGCTGGTGGAAACGCTTGGCGGATTCGTTGCACCGGTGCCGAACATGCGGATTATGTTCTGCAAAGAAACGTTCGACTACCCCGAGCTGGAGACGCACGAGCTGTTGTGCAATCATCTGGCGCCAAAGCTGAAGGGTCGACCACGCGGCAAGCGAAAGAAGACACTGTCCGACTCGTCGCAGTACACGAAGAAGGAAGGCTGTTCGGATGAGAGTGAATCCAACGAATCGGACGTTTCGGATTATTCGTACAGCAAGGTATCTCCCGGCAAGAAGGTTATCGATCTCCATCCTACCCCGCGCTACAATCCCCGGCCATCGCGCGGATCGTCCCAAACGAAGCAGGAACCGATCAGTGTGGTTATTTCTGCCTCCGCCGGCACAGTCAAACCGGGCACCGGGAACCATCTGTCCCAGCGCAACCGGTCCAAATCCACCTCCAAAACGAAATCCTCCAAGAAATCGAAATCGGCCACGAAAGCGGCCCGCAAAGCGGGTCGGGGTACCGGTGGCAAGAAATCGTCCTCCTCGTCTTCTAACTCATCCCTGGCAGCTACTGGAGGTGGAGGCGAATCGGAGGAAGATGAGGAGGAAGGGGATGAAGACGGTGAGGATGGTGGGTCGTCGTCTGCGCGCGGGACTTCGAAGGATCGCGACCGGGAAGATGATGCAGATGAAGACGAGGAAGAGATGGACTacgaggaggacgaggaagaggaggatGATAATCTGTTCCGGGTGAACGAAAGGATGAGCTCGTCGGAGCGTGAGTTCCTGCAGCGGTTGCAAGAATTTCTCGATCCACGAGCGCTTCAGTATGCGGATAGTCAGGCTTCTTCACTAAAGAATGTGAGTTTGTACGCGGTGTATGCGAAGGTGCAAAAGATCGGCGGCTACAGTGCGGTGACGGATAAGGAGGTGTGGAACCAGCTGCTGCAAGGGACGGGTGCTGATAATGGTGTGCTTAGCCGGCGAAAGTACGAGAAAATAGTGCTTCCGTTCGAGAAACATTTGCGCGATCTGCTTGCTGATCAAGACTCGGACCTGAAACGGGAAACGActctgttgctgctgggcgACGACGAGTTGGACACCAAGCTGCGGATGCTGCGCGATGTGAAGCTGGAGAAGCGCGATCCAGACAGTAAATCGCTCGCGCGGATAGAGAACAACGGTAACGCGGGGTTGGATTATTCGGTAAAGCGAGAGGTGGTGGAAAAGAATGAACTGTACGGAAAGTGTGGGATTAAAGAGGACAGCAATGGATCCGGTGGTGGAGGCGGAGGTAGTCCGAATGGTGGTGTGCATCTCGGAATGTCACCGGTATCGGTACCGCTGACGGTGATCGTACGACCCAATCTCGATGAAAAAGACCAAAAATCGTCCCAGATACAGATCAAGCAACCGCACACAACGATCACGGTACACCAGACAACGATACATCCGCACAACGCtaatcaccatcatcacaccAACCAGTCTAATAGcaatcaccatcaccagcacgGTTCGATGAGTGGACAGAGTCCGCAGCATATCACGAACCAGATCCAGATCACCAATCAGATCCAGATCCAACAGATCACAGTACAGTCGAACGATAAGAACGGGTCCGGCAATGGATCCGGCGCCGGAAGTCCGAATGAATCTGCGGGACAGTTCAAGTATAGCTTCAAGCAAGACAAATCGGGCCAGGAGCTAAACATCGAACCGGCTGCAACGACACCGAAGTCAACCTCGTCCTCGATCGCTCCCGGAGCAGGATCACCGTCGGAAGGTGCATCCTCCCTCAGTCTATTCCCGCTCAACCGACAGGGTACGGATCCAGATCTAACCATAAAGGAAGTTTCGGTGTGTCCAACCAGTGGAACCCTATCCATTACGTCCAGCGCATGCGTACCAACGACACCCTCCAAAACGAGTTCGCTAAGACACGTGCGAATGAAGAACGATCGGAAAGGCAATTCCGGTGGCATGCTGATGGATGCGAGTGGATTTATGGGTGCTAGTCAGAAGGAGAACATCCCACTGCTTGGTGGTGGAGTTGGATCCGCCAGTTTGTTCGGTGGCCAGAGTCTAACCACAATCACACCGATTCCTGCTAACATGATGATGGCGGGAGCGTTCCTAGGACATGGTGCTGTTGGTAGCGGAGGTTCACTCGCAGGAGGACGCTCCTCAATGGAGCTGGAACATTCGgcaaagcagcaacagcagacacCGGCAGCAACGGAAGTGATAGATCTCGTCGACAGTGATAATGAAACGGATGGTTCACCCTCGGGACCTTCTGGATCGTCGTCCGCAAACCGTAAGCAGGCTGGTCAGGCGATGCGTCCGATTCCCTCTCTACTGCCACCGATGAAGAAGCGCAAGTTGGACATTTTGCGTGAAGGTGGTCTGGAGGTAACGCCGATCTCAAACGGTGCCAGTATCTTCTCGAGTCTCGGTAAAGGTACGGGGCCGCCAAACCCGATGCGCATCAATATAACTGCCGAACTGAACACGACCCCACCACGGCCGGAGGTATCGAAACGTAACGATCCGCCACGCAAATGCATTCCGACTCCACTCGAGTTCCAGACGCACTGTATGTACACACGCACCGGCAAGATATTCGGCGATCCGAAGGAGTTGGTACCTCCGCGGGCGCCCGTACCTGCACCGGATCTACTCGATTTAACTGGCCGCATGGGCATGGGTATGATGGGTGTGGATAGCATCGCGAACCTTTCCAGCAAAAGTCAAACCCCGCTGCCCGGTATGGATTTCTCCGGTGGGGGGAATGTGCGTCAGAATGCTCGCACTGGACCTGCATCTCGGACGGCACCCAGCCTGCAGATAACGTTGGTTCCGGGGCCGTCCAATAATCACACAAACGCTGGCGGGACTCCCGGGCTTCCACCGCCAATGATGACCCCATTGAATATTCCCATTCCGGTGCCAAGTCAGCAGACAGCAGCGTCCTCTTCCTCGTCGTCATCCGGTGCGATGGGACACAAGAAATCGAAACCGTACGAAATTGTGCCATTACGAgacggtgttggtggtggtacagCACCAATGAAAGAACCCAGCCCGAAGGTTACTATCGGTCCATCGTCTTCGTCGTCCTCCTCATCCGGTTCAACGAACGGTACGATCATTCCGCCACCTCCGCCACCGTCAGCCAGTCAGCTAGGGTTGATGGGTGCCGCTGGTGCATCCCCAAACAATCTGCTTGAAACGCTTGCCAACCTGCAGAAGGTGAACCCGGTACTGATGGCTAGCATACTGTCATCGTCCGGCATCTCGAAGTCCTCTATACCCGGATTGACACAGCTGCTCGGTACGCTTGCCGATCAATCGCCACTAGCGCCGCCGGCGGCAAAGAAGACGCAACGGAGACGATCCAACTCGCAAGCGgcggcagctgcagcagcggcCAGTTCCGTCCCAAACGCGCCCTTGCCCAACGTTTCACCGGCCGGAGCGGGTGGTgttcctccaccaccaccaccgaacgtTCCCTCCATGCCACCGTTCTCAATGCCACCCGGGAGTTTGGGAATGATTCCGCCAGGGATGCTGCAATCCAACTCGCCATCGCCGCAGCATCATCCACCGCAGGCTGATTCGCCCACATCCGCCAACCATCCGCTCAGTCAGCAGATCAAACTACTGCAGCAGGTGcagctacagcagcagcagaagttCTTCCAGCAGAAAGCATCCGAAGAACAGCAAAAGTTGCAAATGTTCCAGCAGTACTCccacaagcagcagcaaccctCCCCGAACCATGGTTCCCCCGTCTCACCCGTCTCGACCGTTGGAGCTGGTTCACCGCTGCCGGGTACACCGCCCCTCGCAATGCCGCCTTCCCCCGTGTCGGTTCCGCGCATTCCGGTCGTACCACCACCGCCGGCCGGTGTACTCTCAGGCCTTCCACCGGGAGCTGGGGCCGGGTTCCCGACCCCATTCGATCCCATCTACCTGCAGTTTTACGCCAATCCCGGTCTCTACCTGCAAAGCCTGCCACCGGAACAGTTGCTGCAGCTGTACAAAAATCTCCCCCAGGGCATTCCAATCACCAAGAGCTAG
Protein Sequence
MDIRVVGGPCGYHGSYTFYKGVKVTFGTKATHELGSGSTSSASSVASPPVSAPGSGSVVGGPSHSTANTTSTDSSSTTSNGHDRRRPSVDIPSEGGNTDSPDSCSAAPATQQRTSSVDGDAPPTGEEQDERLKDRNGGSSTAQCNQTNANSTPTTGSSSSSGSSGNSGSNSTSNSNSNSDSNGNNGSSNANGGTSGKSPNGNHAKPKQTQRKCVSENGVGGGGGSVGGSVASSNGTSTRAGINNNLCRLTSVDREQHYRPLVLALGDCIPVRPWSDSPIACLAELRMVWKDRNEQCLLIALRLYFLPENTPLGRNCHGEDEVLAISDKVILRAEDLLNWIDTEQEWSWGLLTLYDEHSAKDCLGMTRHLSKNSSLDFGDVDKEKHSGENIVSRVAVLSFSRYCRYRALLKRLEGVQHAWLRNALVETLGGFVAPVPNMRIMFCKETFDYPELETHELLCNHLAPKLKGRPRGKRKKTLSDSSQYTKKEGCSDESESNESDVSDYSYSKVSPGKKVIDLHPTPRYNPRPSRGSSQTKQEPISVVISASAGTVKPGTGNHLSQRNRSKSTSKTKSSKKSKSATKAARKAGRGTGGKKSSSSSSNSSLAATGGGGESEEDEEEGDEDGEDGGSSSARGTSKDRDREDDADEDEEEMDYEEDEEEEDDNLFRVNERMSSSEREFLQRLQEFLDPRALQYADSQASSLKNVSLYAVYAKVQKIGGYSAVTDKEVWNQLLQGTGADNGVLSRRKYEKIVLPFEKHLRDLLADQDSDLKRETTLLLLGDDELDTKLRMLRDVKLEKRDPDSKSLARIENNGNAGLDYSVKREVVEKNELYGKCGIKEDSNGSGGGGGGSPNGGVHLGMSPVSVPLTVIVRPNLDEKDQKSSQIQIKQPHTTITVHQTTIHPHNANHHHHTNQSNSNHHHQHGSMSGQSPQHITNQIQITNQIQIQQITVQSNDKNGSGNGSGAGSPNESAGQFKYSFKQDKSGQELNIEPAATTPKSTSSSIAPGAGSPSEGASSLSLFPLNRQGTDPDLTIKEVSVCPTSGTLSITSSACVPTTPSKTSSLRHVRMKNDRKGNSGGMLMDASGFMGASQKENIPLLGGGVGSASLFGGQSLTTITPIPANMMMAGAFLGHGAVGSGGSLAGGRSSMELEHSAKQQQQTPAATEVIDLVDSDNETDGSPSGPSGSSSANRKQAGQAMRPIPSLLPPMKKRKLDILREGGLEVTPISNGASIFSSLGKGTGPPNPMRINITAELNTTPPRPEVSKRNDPPRKCIPTPLEFQTHCMYTRTGKIFGDPKELVPPRAPVPAPDLLDLTGRMGMGMMGVDSIANLSSKSQTPLPGMDFSGGGNVRQNARTGPASRTAPSLQITLVPGPSNNHTNAGGTPGLPPPMMTPLNIPIPVPSQQTAASSSSSSSGAMGHKKSKPYEIVPLRDGVGGGTAPMKEPSPKVTIGPSSSSSSSSGSTNGTIIPPPPPPSASQLGLMGAAGASPNNLLETLANLQKVNPVLMASILSSSGISKSSIPGLTQLLGTLADQSPLAPPAAKKTQRRRSNSQAAAAAAAASSVPNAPLPNVSPAGAGGVPPPPPPNVPSMPPFSMPPGSLGMIPPGMLQSNSPSPQHHPPQADSPTSANHPLSQQIKLLQQVQLQQQQKFFQQKASEEQQKLQMFQQYSHKQQQPSPNHGSPVSPVSTVGAGSPLPGTPPLAMPPSPVSVPRIPVVPPPPAGVLSGLPPGAGAGFPTPFDPIYLQFYANPGLYLQSLPPEQLLQLYKNLPQGIPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00099476;
90% Identity
iTF_00101481;
80% Identity
-