Basic Information

Gene Symbol
ARID5B
Assembly
None
Location
Contig0:72871105-72937647[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-12 1.3e-08 34.8 0.0 2 89 686 766 685 766 0.89

Sequence Information

Coding Sequence
ATGGATATCAGGGTCGTTGGCGGTCCCTGCGGCTACCATGGCTCGTACACATTTTTCAAGGGCGTTAAAATAACGTTCGGCCAGAAAGTAACGCACGAATCGGGCAGTGGTTCCACTTCGTCCGCTTCATCCGTAGCCAACCTACCAGTGTCCGCGCCCGGCAGCGGAAGTGTTGGTGGCCCATCACACAGCACTGCCAACACTACCTCCATCGACAGCAGCAGTACTACTACCAGCAATGGCCACGACCGGCGACGCCCATCGGTCGACATTCCCAGCGAGGGTGGCACAACCGACTCACCTGATTCCTCCTCCACGTCAGCTGTCACCACCGTCCAGCCCAAAGCGTTGGCGGCTGGTGAGGATGGTGATACACCACCAACCGGGGAGGAACGGGACGAGCGGTTGAAGGACCGCAATGATCGTTCCTCCACTGCCCAATGCAATCAAACCAATGCCAACAGTACGTCGACAACCGACGGCAAAAGTAGTAGCGGTGGTAGTAGTGGAAATAGTGGTAGCAACAATACTAGTAATAGCAATAGCAATAGTGATAGTAACGGTAACAACGGTAGCTCTAGTGCCAACGGTGGCACCAGTGGAAAGAGTCAAAATGGCAACCATGCGAAGCCAAAACAAACGCAACGAAAATGTGTCAGCGAAAATGGCGTCGGTGGCGCTGGTGGAGTTAGTGGCGGTAGTGTTGGAAGCAGTGTTGCCAGCAGCAACGGTACCAGCACCAGAGCCGGTATCAACAACAACCTCTGCCGATTAACGTCGGTCGATCGAGAGCAACACTACCGACCGCTGGTGCTGGCACTGGGCGACTGCATTCCGGTCCGACCATGGTCCGACTCACCGATCGCATGCTTGGCCGAGCTGCGGATGGTCTGGAAGGATCGGAACGAGCAGTGCCTGCTGATAGCCCTCCGGTTGTACTTTCTGCCGGAAAATACACCACTGGGCCGTAACTGTCATGGGGAGGACGAGGTACTAGCAATCTCGGACAAGGTGATACTGCGGGCAGAAGACCTCCTCAACTGGATCGATACCGAGCAGGAATGGAGCTGGGGTTTGCTCACGTTGTACGATGAGCACAGTGCCAAGGATTGTCTCGGGATGACGCGACATCTCAGCAAGAACTCCTCGCTAGACTTTGGCGATGTCGACAAGGAGAAACATTCAGGTGAAAACATTGTCTCGAAGGTGGCAGTGTTAAGCTTTTCAAGGTACTGCCGTTACCGGGCATTGCTGAAACGTTTGGAAGGTGTCCAGCATGCGTGGGTACAGAATGCGCTGGTGGAAACGCTTGGCGGATTCGTTGCACCGGTCCCTAACATGCGGATAATGTTTTGCAAAGAAACGTTCGACTATCCGGAGCTGGAGACACACGAGCTGCTGTGCAATCATTTGGCGCCAAAGCTAAAGGGACGACCACGCGGTAAGCGAAAGAAAACACTGTCCGATTCGTCGCAGTACACGAAGAAGGAAGGCTGCTCGGATGAGAGTGAGTCCAACGAATCGGACGTTTCGGATTACTCCTACAGCAAGGTATCTCCCGGCAAGAAGGTTATCGATCTCCATCCTACCCCACGCTACAATCCTCGGCCATCGCGTGGATCGTCCCAAACGAAGCAGGAACCGATCAGTGTAGTGATATCTGCCTCCGCCGGTACAGTCAAACCGAGCACCGGGAATCATTTGTCCCAGCGCAATCGGTCCAAATCCACCTCCAAGACGAAAACATCCAAGAAGTCAAAGTCGGCCACGAAAGCGGCACGGAAAGCGGGTCGTGCTGCTGGTGGCAAGAAATCATCCTCCTCGTCCTCCAACTCATCGCTGGCAGCTGCTGGAGGTGGTGGTGAATCGGAAGAGGATGAGGACGATGTGGATGAGGATGGTGAGGATGGTGGGTCGTCGTCGGCGCGCGGCGCATCAAAAGATCGCGATCGGGAAGATGAGGCGGACGAAGACGAGGAAGAGATGGACTACGAGGAAGATGAGGAGGAGGAGGATGATAATCTGTTCCGGGTGAACGAAAGGATGGGTGCGTCCGAGCGTGAGTTCCTGCAGCGGTTGCAAGAATTCCTTGATCCACGCGCACTCCAGTATGCGGATAGTCAAGCTGCTTCACTAAAGGGTGTGAGTTTGTACGCGGTATATGCGAAGGTGCAAAAGATCGGTGGCTACAGTGCGGTTAGTGATAAGGAGGTGTGGAACCAGCTGCTGCAAGGTACGGGTGCGGAGAATGGAGTGCTTAGCCGGCGGAAGTACGAGAAGATTGTGCTACCGTTCGAGAAGCATCTGCGCGAGTTGGTCGGTGATCAAGATTCGGATGTGAAACGGGAAACCTTGCTGCTGTTGGGTGATGACGAGTTGGACACGAAGCTTCGATTGTTGCGCGACGTTAAGCTGGAGAAGCGTGATCCGGACAGTAAATCGCTGGCGCTGATAGAAAACAACGGCAACGCGGGGTTGGATTATTCGGTAAAGCGTGAGGTGGTAGAGAAAGATGAACTGTACGGGAAGTGTGGGCTTAAAGAGGACAGCAATGGTGGAGGTAGCCCGAATGGTGGTGTACATCTCGGAATGTCACCAGTATCTGTTCCGCTCACGGTGATCGTTCGACCAAATCTCGATGAAAAGGATCAAAAGTCGTCCCAGATACAGATCAAGCAACCGCACACAACGATCACGGTACATCAGACAACGATTCATCCGCATAATGCCAACCACCATCATCACACCAGTCAGCCAAATAGCAATCATCATCACCAGCACGGTTCGTTGAGTGGACAGAGTCCGCAGCACATTACGAACCAGATACAGATCACCAATCAGATCCAGATCCAACAGATCACGGTACAGTCGAATGATAAGAATGGACCTGGTAGTTTGACGGGAACAGGCTCGGGAAGTCCGAATGAATCTGCGGGACAGTTCAAGTATAGCTTCAAACAAGACAAATCGGGTCAAGAGCTGAATATTGAACCGGCTGCAACGACACCGAAGTCAAGCTCGACCACAATCGCTTCCGGTGCGGGATCACCGTCCGAGGGTGCATCATCACTGAGTCTATTCCCGCTTAACCGACAGGGCACGGATCCGGATCTAACGATAAAGGAAGTTTCGGTGTGTCCAACGAGTGGAACGCTATCCATTACGTCCAGTGCATGCGTGCCGACGACACCTTCGAAGACGAGCTCGCTGAGGCATGTGCGAATGAAGAACGATCGCAAGGGCAATTCCGGTGGGATGCTTATGGAGGGTGGTGGATTTATGGGTGCTAGTCAGAAGGAGAACATCCCACTGCTTGGTGGTGGAGTTGGCTCGGCGAGTTTGTTCGGTGGGCAGAGTCTAACCACAATCACACCGATCCCGGCCAACATGATGATGGCAGGAGTGTTCCTCGGACATGGTGCTGTTGGTGCCGGTGGTGGAGGTGGTTCGCACACTGGAGGACGCTCTTCGATGGATCTGGAACACGCTGGAAAGCAACAGCAACAGCAGACACCGGCAGCAACCGAAGTGATCGATCTGGTTGATAGTGATAACGAAAACGATAGTTCACCACCTGGATCGAATCCTGGATCGTCCGCCAACCGTAAACAGGCAGGTCAGGCGATGCGTCCCATACCCTCGCTGCTACCACCAATGAAGAAGCGCAAGTTGGACATCTTGCGCGAGGGTGGTCTCGAGGTAACACCGATCTCAAACGGTGCCAGTATCTTCTCGAGTCTCGGCAAAAGTACGGGACCGCCCAATCCGATGCGTATCAATATCACGGCCGAACTGAACACGACTCCACCACGGTCGGACGTATCGAAACGCAACGATCAGCCACGCAAATGCATTCCGACACCGCTCGAATTCCAGACGCACTGTATGTACACACGCACCGGCAAGATATTCGGCGATCCGAAGGAGTTGGTACCACCGCGGGCACCCGCGCCTGCACCGGATCTACTCGATTTGACTGGCCGCATGGGTATGGGTATGATGGGTGTAGATAGCATTGCAAACCTCTCCAGCAAAAGCCAACCCTCGCTGCCCGGTATGGATTTCTCTGCCGGTGGTAATGTGCGTACGAATGCACGCACTGGACCTGCGTCCCGGACGGCACCGAGCCTGCAGATTACGTTGGTTCCGGGGCCGTCTAATAATCACAACACCTCCGGTGGTGTTCCCGGTCTTCCACCGCCAATGATGACTCCGTTGAATATTCCCGTTCCGGTGCCAAGTCAGCAGACAGCAGCCGCATCATCCGCGTCCTCTAGTGCGATGGGACACAAGAAATCGAAAGCGTATGAAATTGTGCCATTAAGAGACGGTGGTATTACCGCACCAATGAAGGAACCCAGCCCGAAGGTAACTATCGGTCCATCGTCTTCGTCGTCCTCTTCATCCAGCTCGACAAACGGAACTATCATTCCCCCACCTCCACCACCATCAGCCAGTCAGCTAGGATTGATGGGCGCTGCTGGAGCATCTCCAAACAATCTGCTCGAAACGCTTGCCAACCTGCAAAAGGTGAACCCGGTGCTGATGGCCAGCATACTGTCATCATCCGGTATCTCAAAGTCCTCTATACCTGGCTTGACGCAACTGCTTGGCACGCTTGCCGATCAGTCACCACTGGCACCACCTGCGGCGAAAAAGACGCAACGGAGAAGATCCAACTCACAAGCGGCGGCGGCCGCAGCAGCTGCTGCAGCAGCGGCCAATTCCGTCCCGAGCGCACCCTCACCCAACGTTTCGCCGGCCGGTGTTGGTGGTGTTCCTGCAGCAAATGTGCCCTCCATGCCACCGTTCCCAATGCCACCAGGCAATTTGGGAATAATTCCACCAGGGATGTTGCAATCCAACTCTCCATCACCGCAGCATCATCCACCGCAGGCTGATTCACCTACGTCCGCGAACCATCCGCTCAGTCAACAGATTAAACTACTGCAGCAGGTGCAGCTACAGCAGCAGCAAAAGTTCTTCCAGCAGAAAGCATCCGAAGAGCAGCAGAAGTTGCAAATGTTCCAGCAGTATTCCCAGAAACAACAACCTTCGCCGAGCCAGAACTCTCCCTCGTCACCCGTTTCGACTGTTGGGGCAGGTTCACCTTTGCCGGGTACACCGCCACTCGCAATGCCACCTTCGCCCGTATCAGTACCACGCATTCCGGTCGTTCCACCACCCTCGGGAGGTGTATTGTCCGGACTTCCACCAGGTGCTGGTGCTGGATTCCCGCCACCGTTCGACCCAATCTATCTGCCACTGTACGCGAATCCGGGTCTATACCTGCAAAGTCTGCCACCGGAACAGTTGCTGCAGTTGTACAAAAATCTCCCACAGGGCATTCCAATCACCAAGAGCTAG
Protein Sequence
MDIRVVGGPCGYHGSYTFFKGVKITFGQKVTHESGSGSTSSASSVANLPVSAPGSGSVGGPSHSTANTTSIDSSSTTTSNGHDRRRPSVDIPSEGGTTDSPDSSSTSAVTTVQPKALAAGEDGDTPPTGEERDERLKDRNDRSSTAQCNQTNANSTSTTDGKSSSGGSSGNSGSNNTSNSNSNSDSNGNNGSSSANGGTSGKSQNGNHAKPKQTQRKCVSENGVGGAGGVSGGSVGSSVASSNGTSTRAGINNNLCRLTSVDREQHYRPLVLALGDCIPVRPWSDSPIACLAELRMVWKDRNEQCLLIALRLYFLPENTPLGRNCHGEDEVLAISDKVILRAEDLLNWIDTEQEWSWGLLTLYDEHSAKDCLGMTRHLSKNSSLDFGDVDKEKHSGENIVSKVAVLSFSRYCRYRALLKRLEGVQHAWVQNALVETLGGFVAPVPNMRIMFCKETFDYPELETHELLCNHLAPKLKGRPRGKRKKTLSDSSQYTKKEGCSDESESNESDVSDYSYSKVSPGKKVIDLHPTPRYNPRPSRGSSQTKQEPISVVISASAGTVKPSTGNHLSQRNRSKSTSKTKTSKKSKSATKAARKAGRAAGGKKSSSSSSNSSLAAAGGGGESEEDEDDVDEDGEDGGSSSARGASKDRDREDEADEDEEEMDYEEDEEEEDDNLFRVNERMGASEREFLQRLQEFLDPRALQYADSQAASLKGVSLYAVYAKVQKIGGYSAVSDKEVWNQLLQGTGAENGVLSRRKYEKIVLPFEKHLRELVGDQDSDVKRETLLLLGDDELDTKLRLLRDVKLEKRDPDSKSLALIENNGNAGLDYSVKREVVEKDELYGKCGLKEDSNGGGSPNGGVHLGMSPVSVPLTVIVRPNLDEKDQKSSQIQIKQPHTTITVHQTTIHPHNANHHHHTSQPNSNHHHQHGSLSGQSPQHITNQIQITNQIQIQQITVQSNDKNGPGSLTGTGSGSPNESAGQFKYSFKQDKSGQELNIEPAATTPKSSSTTIASGAGSPSEGASSLSLFPLNRQGTDPDLTIKEVSVCPTSGTLSITSSACVPTTPSKTSSLRHVRMKNDRKGNSGGMLMEGGGFMGASQKENIPLLGGGVGSASLFGGQSLTTITPIPANMMMAGVFLGHGAVGAGGGGGSHTGGRSSMDLEHAGKQQQQQTPAATEVIDLVDSDNENDSSPPGSNPGSSANRKQAGQAMRPIPSLLPPMKKRKLDILREGGLEVTPISNGASIFSSLGKSTGPPNPMRINITAELNTTPPRSDVSKRNDQPRKCIPTPLEFQTHCMYTRTGKIFGDPKELVPPRAPAPAPDLLDLTGRMGMGMMGVDSIANLSSKSQPSLPGMDFSAGGNVRTNARTGPASRTAPSLQITLVPGPSNNHNTSGGVPGLPPPMMTPLNIPVPVPSQQTAAASSASSSAMGHKKSKAYEIVPLRDGGITAPMKEPSPKVTIGPSSSSSSSSSSTNGTIIPPPPPPSASQLGLMGAAGASPNNLLETLANLQKVNPVLMASILSSSGISKSSIPGLTQLLGTLADQSPLAPPAAKKTQRRRSNSQAAAAAAAAAAAANSVPSAPSPNVSPAGVGGVPAANVPSMPPFPMPPGNLGIIPPGMLQSNSPSPQHHPPQADSPTSANHPLSQQIKLLQQVQLQQQQKFFQQKASEEQQKLQMFQQYSQKQQPSPSQNSPSSPVSTVGAGSPLPGTPPLAMPPSPVSVPRIPVVPPPSGGVLSGLPPGAGAGFPPPFDPIYLPLYANPGLYLQSLPPEQLLQLYKNLPQGIPITKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00099476;
90% Identity
iTF_00104945;
80% Identity
-