Basic Information

Gene Symbol
RERE
Assembly
GCA_000473525.2
Location
KI919554.1:46139-50668[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-11 3.8e-08 33.1 0.1 2 45 961 1005 960 1006 0.91

Sequence Information

Coding Sequence
ATGGCAGTCACAGCGACGACCACACTCTCCGCCTCGAACAGTGGCGCCACCATCGTCCACCAGAACGGAGGAACCCTTAGCGGCAACAGCAGCAGCATCATCAGCAAGGCGACAAACGCTGGCAGTGCTAGTGCCGATCCTAATGGACCGGTGACGGCTACCCTCACGGTGTCATCGTCGTCTGCGGCCAGTACGTCCTCGCTCAGTGCGCAGAAGCCGGTCGAGTGTAATCTGTGCCACCGGAAGTTCAAAAATATTCCCGCCCTGAACGGGCACATGCGACTGCACGGCGGCTACTTCAAGAAGGACTCGGAGGCGAAGAAATGTGATAAGAAGGAAAACACGGGCCCCCCGCTCCAGACGGCGAGCAATCTCTTGTTGAAGGGTTCGTTCGTGGTGCCGGCACCGCCGCTCACCGCCCGCCGGCTGATCGACGCCAACGAAGCATTCCTCTCGTCCAAACCGAGCACGGTCGCGATCGTCTCCACGTCGAACGGCACCACGCAGATCATCAACACCGCCGCCCTGCACTCTAAGGCGACCGTGCTGAGCGTCAGCAGTGCGCCGCCGCCCTCCAACAACACCACCACCTCGACTACCCTCGCGCCCTCGATAACGATCAACGGGCTGGGGACGGCGGCCGCAGCAACGGAGCTGAAAGATGCGACGCTCATCGAACTGCTCAAGCGCGGCACCAAGGTGGCCGTCAAGCGGGCGATGGCGAGCAATGACACCTCCACCGTTGCGCTCTCACTACAGCCACAAGCCACGTCCAACCCAACGGTGACGGTGGTTTCGACCGCGAGCAGCACCAACCCTGCCCAGCTGCTCACGTCCGCCAACACGCGCACGCTTACGGTTGTCCCGACCGGCCCAACGCTTTCCACCAGCCCCACCACCGGCAAGCCGTCCGGTCAAACGATCGCCGGCCCAACCCTGCTGGCCAATCCCACCGCCAGCACCGAGCCGACGCCACTGTCGCTAACCATATCGCAAGCGCCGGCCACTACCCCTGGCGACGTGTTCACCCTCGCCTACTCGACCGACTTCGGCGATGGCGATGTGTACAGCGTGAGCGACACGGCCATGCTGCTGCAGGCCGTCGATCCGATCCAGCTGCTGCACGACTCCAACTCGGCCGAGCCGCTCGACGAGATCGCCCTGTCCGACTACGGCTCGATCAGCGACCAGGGCTTCACCCCGTCCCGCCAAATCCAGGCCGTGCTCGACTCGCCCCTGCCCGAGGGATTGGCCGAGTTTAGTGCCCTGCACGGCAAGGACTTTAGCGTCCTGTACGGTGGCACCGGTGCGCCCGCGACCGAACCGAACGGCAGCAGCACCACCAACACCAGCGCCCTGCTACAATCATCCCCCTCGGGGGCGCATCTTTCCCCGCTACCCTCACCGCTAGCCTACCCAACGCCACCGGCATCGCACGAAGCGGTCGCACAAGCGTCCCCCTTCCTGGACGACTCGCGCCACTTCACCGACGCGGGCTCCTTCTTCGACGACAAGCGCAGTGCGCAAAGCTTTCTGGACGATGGCTTCTTCAAAACTGAACCGAAGGACGGCGACTGCAAGGCGTCCGAGAGCGCGAAGATACTGGCGCTGAAGCACGAGCTGCTGGACGAAAACCACGACCTGTTCCGGGCGAACAAACACCATCTGCTGGACGAGCACTGCTCGGAGCTGTTCAAGACGGAGGACGGGTTCTTCGCCGAGTCGAAACCGTCGGCGGACGGGACGTCCAAGATGAACCTGGACTTTCTGGACGACGCGCAGGTGTTTATCGAGGAGACGCGCAACGCGTCCTCCCCGCTGTCGAATGCCTTCTTCTCCGCCACCATGTCGTCGGCGGCGGAGGTAAAGGAAGCGCTCGACGAGGTCCTGCCGAACGATGACGATGACGATATTGGCGTGTCCGAGGGCGACATCGACCTGTACTACCTGAACGGCCTTTCCTCGCTGCAGTCGCAGATGATGCCCAACTCGGACGATCCGCTGCTTGCCAAAAAGTCCAAACCTTCCGACGTGGAAGCGAGCGGCTCGTTCGGGGCGGACGCCAGCAAAGCACCACTCACGGTTCAAACCGACCCGATGCCAAAGGATGCCGACAGCGTTTTTCTCAGCCCGAGCAGCCTGTCCTCGCACAGCTGCTCCTCCTCTTCGTCCTCCTCCTCGCTGTCGCTCTCGTCCGTAGCGTCGCCCCGGCTGCAGCATGCACTGCTGGGCAGTGCCCACCCGGCCGCCGGTGGTGTCGTGTGGCCCCGCAAACGCTCCCAAACATCAGCGTCCTCATCGTCACCCTCAGCCAACAGTGCCGCTGGGACCACCCCATCCCATCCCGCCGGTCAGCGAAAGCCGACGGTCTATCTGTCGAAGCTGCGACGATCCACGGCGGCACTGCTGCCCGCCCTGCACTACACGCCCGCCCCGATGCTCAACCCGGAACGGTCCGGCACGGCCGGGCTGTACGCGAGCGTAGCGTACGGGCGGACGGGCACGGCCGGCGGCTCGCTCGTCGAGCCCGATCTCGACTCCACGATGGACAGCACGAGCGATATCTTTTCCGAGCCGCCGCTGCCGATCCGGCCGCGCATCAATCTCGGCCCCGACTATCAGGCGACCTTGCCGGACTGCACGCGCCCGGCCTACGCGGCGCCGTTCCAGCCCGGCGTCCCGCCGGTGCAGCGGCTCTGGGATCCGGCGCTCGCGCCAAACGACCGCCAGCTGCAGCGGTTCATCGAGCTGGCCCGTTCGTCCGCCGCACCGTTGGGTTGCCACTCGGAGGAGAATGCACTGCGCGCCCTGCTGGAGGCGAACGGTGAGATACACCAGGCGATACTGGGCATGCTGCAGGGCCCGCCCGCCACCATCCATCGCCGGTGGACGGCGGACGAGATCGAGCAGCTGATACAGGGGCTGGAAGAGTACGGCAAGGACTTCCACCGGATCGCTCGCGATCTGTTGCCCGGCAAGTCGACGGGCGATTGCGTGCAGATGTACTACTTCTGGAAGAAGCTCGGCATCGACTACGGCAAGGGTACGACGGCGCTGGCTGCCGGGCCGAAGTACGGTGGACTGCATGGGGCGCTTTCGCCTACTCCGTCACCACCGGCACCAACGCCCCCGGTAGAGGATCTGCTGCTCGATCATCTCGACTATACGGCTTCGGCAAGCGCTGGAGCGACGATGCCCCGGGGGCAACAGGCTGGCGGGTCGAACAGTGGCCATTTGCAGCCGAATGGGCACGGTAGTAGCACGGCCAGCGACGTCCGACCGCATGTGTGCGAGGTTCCTGACTGTTCAGCGAGCTTCTCGTCCAAAGCGGCCCTTCACGGGCACATTCGCATACACTGCATCGGGCGTAACCACAGCACAGTTCAAAATGGTAATTTCTTGAGTGCCGCCGGTAACCCCATTAACCCTAACCACATACCGACAAAGGATGACTATCCCTGCAAGGTGTGCGGCAAGTAA
Protein Sequence
MAVTATTTLSASNSGATIVHQNGGTLSGNSSSIISKATNAGSASADPNGPVTATLTVSSSSAASTSSLSAQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSEAKKCDKKENTGPPLQTASNLLLKGSFVVPAPPLTARRLIDANEAFLSSKPSTVAIVSTSNGTTQIINTAALHSKATVLSVSSAPPPSNNTTTSTTLAPSITINGLGTAAAATELKDATLIELLKRGTKVAVKRAMASNDTSTVALSLQPQATSNPTVTVVSTASSTNPAQLLTSANTRTLTVVPTGPTLSTSPTTGKPSGQTIAGPTLLANPTASTEPTPLSLTISQAPATTPGDVFTLAYSTDFGDGDVYSVSDTAMLLQAVDPIQLLHDSNSAEPLDEIALSDYGSISDQGFTPSRQIQAVLDSPLPEGLAEFSALHGKDFSVLYGGTGAPATEPNGSSTTNTSALLQSSPSGAHLSPLPSPLAYPTPPASHEAVAQASPFLDDSRHFTDAGSFFDDKRSAQSFLDDGFFKTEPKDGDCKASESAKILALKHELLDENHDLFRANKHHLLDEHCSELFKTEDGFFAESKPSADGTSKMNLDFLDDAQVFIEETRNASSPLSNAFFSATMSSAAEVKEALDEVLPNDDDDDIGVSEGDIDLYYLNGLSSLQSQMMPNSDDPLLAKKSKPSDVEASGSFGADASKAPLTVQTDPMPKDADSVFLSPSSLSSHSCSSSSSSSSLSLSSVASPRLQHALLGSAHPAAGGVVWPRKRSQTSASSSSPSANSAAGTTPSHPAGQRKPTVYLSKLRRSTAALLPALHYTPAPMLNPERSGTAGLYASVAYGRTGTAGGSLVEPDLDSTMDSTSDIFSEPPLPIRPRINLGPDYQATLPDCTRPAYAAPFQPGVPPVQRLWDPALAPNDRQLQRFIELARSSAAPLGCHSEENALRALLEANGEIHQAILGMLQGPPATIHRRWTADEIEQLIQGLEEYGKDFHRIARDLLPGKSTGDCVQMYYFWKKLGIDYGKGTTALAAGPKYGGLHGALSPTPSPPAPTPPVEDLLLDHLDYTASASAGATMPRGQQAGGSNSGHLQPNGHGSSTASDVRPHVCEVPDCSASFSSKAALHGHIRIHCIGRNHSTVQNGNFLSAAGNPINPNHIPTKDDYPCKVCGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00100908;
80% Identity
-