Basic Information

Gene Symbol
RERE
Assembly
GCA_016097175.1
Location
CM027928.1:14500141-14522158[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-11 4.4e-08 32.8 0.1 2 45 1180 1224 1179 1225 0.91

Sequence Information

Coding Sequence
ATGAAACGGGTCTGCAGCAAAGTGTTCGGCAATGCGTCCGCCCTCGCCAAACACAAGCTAACGCACAGCGACGAGCGGAAGTACGTGTGTGGCATGTGCTCGAAAGCGTTCAAGCGGCAGGATCACCTCAATGGCCATATGCTGACGCATCGTAACAAAAAACCGTACGAGTGCAAGGCGGACGGCTGCGGCAAATCGTACTGTGATGCGCGATCGCTCCGGCGCCACACCGAGAACCACCACAGTGCGCTCGGGCTGGCGAACTCGTCCGGCACGGCCAGCCCCGGCCCGGGTGGCAGCAATGCTGGACCGCCCGGGGGGCTCAGTCTGTCACCGGCGACGGCAAGTGGCAATGAGGGACTTACCCGCCAACAGCTCGATCTAATTTCCCAGATCATGCAGCAGACGAAGCAGGCGAATGCGGCAGCTGCTGCTGCAGCCGCCGCCGCCTCCGCCGCTACGAGCACCACCACGAACGGTAGCAGCTCGGTACAGTCCACCAGCCAGAAGGTCCCGGTACGACCCCGCACTTGGAATATGCAGCTGCAGCTCAGCCAGAACAAGCTATCCGCATCGACCACGGTGGCAGCGACGACAGCACCGACGGTCGTCAGTGCCGTCCCCGTGCCTTCAATGGCAGTCACAGCGACGACCACACTCTCCGCCTCGAACAGTGGCGCCACCATCGGGCACCAGAACGGAGGAACCCTTAGCGGCAACGGCAGCAGCATCATCAGCAAGGCGACAAACGCTGGCAGTGCTAGTGCCGATCCTAATGGACCGGTGACGGCAACCCTCACGGTGTCATCGTCGTCTGCGGCCAGTACGTCCTCGCTCAGTGCGAAGCCGGTCGAGTGTAATCTGTGCCACCGGAAGTTCAAAAATATTCCCGCCCTGAACGGGCACATGCGACTGCACGGCGGCTACTTCAAGAAGGACTCGGAGGCGAAGAAATGTGATAAGAAGGAAAACACGGGCCCCCCGCTACAGACGGCGAGCGTGGGCGTGCGGGCACTGATCGAGGAGAAGATTATCAACAAGCGCAGCAAGGATTTGAAGGGTTCGTTCGTGGTGCCGGCACCGCCGCTCACCGCCCGCCGGCTGATCGACGCCAACGAAGCATTCCTCTCGTCCAAACCGAGCACGGTCGCGATCGTCTCCACGTCGAACGGCACCACGCAGATCATCAACACCGCCACCCTGCACTCCAAGGCGACCGTGCTGAGCGTCAGCAGTGCGCCGCCGCCCTCCAACAACACCACCACCTCGACCACCCTCGCGCCCTCGATAACGATCAACGGGCTGGGGGCGGCGGGCGCAGCAACGGAGCTGAAGGATGCGACGCTCATCGAACTGCTCAAGCGCGGCACCAAGGTGGCCGTCAAGCGGGCGATGGCGAGCGGTGACACCTCCACCGTGCTCTCACTACAGCCACAAGCCACGCCCAACCCAACGGTGACGGTGGTTTCGACCGCGAGCAGCACCAACCCTGCCCAGCTGCTCACGTCCGCCAACACGCGCACGCTTACGGTTGTCCCGACCGGGCCGACGCTTTCCACCAGCACCACCACCGGCAAGCAGTCCGGTCAAACGATCGCCGGCCCAACCCTGCTGGCCAATGCCACCGCCAGCACCGAGCCGACGCCACTGTCGCTAACCATATCGCAAGCGCCGGCCACGACCCCCGGCGACGTGTTCACCCTCGCCTACTCGACCGACTTCGGCGACGGCGATGTGTACAGCGTGAGCGACACCGCCATGCTGCTGCAGGCCGTCGATCCGATCCAGCTGCTGCACGACTCCAACTCGGCCGAGCCGCTCGACGAGATCGCCCTGTCCGACTACGGCTCGATCAGCGACCAGGGCTTCACCCCGTCCCGCCAAATCCAGGCCGTGCTCGACTCGCCCCTGCCCGAGGGATTGGCCGAGTTTAGTGCCCTGCACGGCAAGGACTTTAGCGTCCTGTACGGTGGCACCGGTGCGCCCTCCAGCGAACCGAACGGCAGCAGCAGCACCACCAACACCAGCGCCCTACTACAATCATCCCCCTCGGGGGCGCATCTTTCCCCGCTACCCTCACCGCTAGCCTACCCCACGCCACCGGCATCGCACGAAGCCGTCGCGCAAGCGTCCCCCTTCCTGGACGACTCGCGCCACTTCACCGACGCGGGCTCCTTCTTCGACGACAAGCGCAGTGCGCAAAGCTTTCTGGACGATGGTTTCTTCAAAACCGAACCGAAGGACGGCGACTGCAAGGCGTCCGAGAGCGCGAAGATACTGGCGCTCAAGCACGAGCTGCTGGACGAAAACCACGACCTGTTCCGGGCGAACAAACACCACCTGCTGGACGAGCACTGCTCGGAGCTGTTCAAGACGGAGGACGGGTTCTTCGCCGAGTCGAAACCGTCGGCGGACGGGACGTCCAAGATGAACCTGGACTTTCTGGACGACGCGCAGGTGTTCATCGAGGAGACGCGCAACGCGTCCTCCCCGCTGTCGAATGCCTTCTTCTCCGCCACCATGTCGTCGGCGGCGGAGGTAAAGGAAGCGCTCGACGAGGTCCTGCCGAACGATGACGATGACGACATTGGCGTGTCCGAGGGCGACATCGACCTGTACTACCTGAACGGCCTTTCCTCGCTGCAGTCGCAGATGATGCCCAACTCGGACGATCCGCTGCTTGCCAAAAAGTCCAAACCTTCCGACGTGGAAGCGAGCGGCACGTTCGGGGCGGACGCCAGCAAAGCACCACTCACGGTCCAAACCGACCCGATGCCAAAGGATGCCGACAGCGTGTTTCTCAGCCCGAGCAGCCTGTCCTCGCACAGCTGCTCCTCCTCTTCGTCCTCCTCCTCCTCGCTGTCGCTCTCGTCCGTAGCGTCGCCCCGGCTGCAGCATGCACTGCTGGGCAGTGCCCACCCGGCCGCCGGTGGTGTCGTGTGGCCCCGCAAACGCTCCCAAACATCAGCGTCCTCACAGTCGCCCTCAGCCAACAGTGCCGCCGGGACCACCCCATCCCATCCGGCCGGTCAGCGCAAGCCGACGGTCTATCTGTCGAAGCTGCGACGATCCACGGCGGCACTGCTGCCCGCCCTGCACTACACGCCCGCCCCGATGCTCAACCCGGAACGGTCCGGCACGGCCGGGCTGTACGCGAGCGCGGCCGGCGGCTCGGTCGTCGAGCCCGATCTCGACTCCACGATGGACAGCACGAGCGATATCTTTTCCGAGCCGCCGCTGCCGATCCGGCCGCGCATCAACCTCGGCCCCGACTATCAGGCGACCTTGCCGGACTGTACGCGCCCGGCCTACGCGGCCCCGTTCCAGCCCGGCGTCCCGCCGGTGCAGCGGCTCTGGGATCCGGCGCTCGCGCCAAACGACCGCCAGCTGCAGCGGTTCATCGAGCTGGCCCGTTCGTCCGCCGCACCGCTGGGTTGCCACTCGGAGGAGAATGCACTGCGCGCCCTGCTGGAGGCGAACGGTGAGATACACCAGGCGATACTGGGCATGCTGCAGGGCCCGCCCGCCACCATCCATCGCCGGTGGACGGCGGACGAGATCGAGCAGCTGATACAGGGGCTGGAAGAGTACGGCAAGGACTTCCACCGGATCGCTCGCGATCTGTTGCCCGGCAAGTCGACGGGCGATTGCGTGCAGATGTACTACTTCTGGAAGAAGCTCGGCATCGACTACGGCAAGGGTACGACGGCGCTGGCTGCCGGGCCGAAGTACGGTGGGCTGCATGGGGCGCTTTCGCCTACACCGTCACCACCGGCACCAACGCCCCCGGTAGAGGATCTGCTGCTCGATCATCTCGACTATACGGCCTCGGCAAGCGCGGGAGCGACGATGCCCCGGGGGCAACAGGCTGGCGGGTCGAACAGTGGCCATTTGCAGCCGAATGGGCACGGTAGTAGCACGGCCAGCGACGTCCGACCCCATGTGTGCGAGGTTCCTGACTGTTCAGCGAGCTTCTCGTCCAAAGCGGCCCTTCACGGGCACATTCGCATACACTGCATCGGGCGCAACCACAGCACAGTTCAAAATGGTAATTTCTTGAGTGCCGCCGGTAACCCCATTAACCCTAACCACATACCGACAAAGGATGACTATCCCTGCAAGGTGTGCGGCAAGGTATTCAATAAGGTGGCGCACGGCCGAAGAGGGGAGGGCGCACACGTGGCGGGTGCGAAACGTTGCTACGAATACATCAAGGCGCGTACGCCACTGGCGGGTTCGCCCCGAAAAGCAAGCCAACCAACCTGA
Protein Sequence
MKRVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSALGLANSSGTASPGPGGSNAGPPGGLSLSPATASGNEGLTRQQLDLISQIMQQTKQANAAAAAAAAAASAATSTTTNGSSSVQSTSQKVPVRPRTWNMQLQLSQNKLSASTTVAATTAPTVVSAVPVPSMAVTATTTLSASNSGATIGHQNGGTLSGNGSSIISKATNAGSASADPNGPVTATLTVSSSSAASTSSLSAKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSEAKKCDKKENTGPPLQTASVGVRALIEEKIINKRSKDLKGSFVVPAPPLTARRLIDANEAFLSSKPSTVAIVSTSNGTTQIINTATLHSKATVLSVSSAPPPSNNTTTSTTLAPSITINGLGAAGAATELKDATLIELLKRGTKVAVKRAMASGDTSTVLSLQPQATPNPTVTVVSTASSTNPAQLLTSANTRTLTVVPTGPTLSTSTTTGKQSGQTIAGPTLLANATASTEPTPLSLTISQAPATTPGDVFTLAYSTDFGDGDVYSVSDTAMLLQAVDPIQLLHDSNSAEPLDEIALSDYGSISDQGFTPSRQIQAVLDSPLPEGLAEFSALHGKDFSVLYGGTGAPSSEPNGSSSTTNTSALLQSSPSGAHLSPLPSPLAYPTPPASHEAVAQASPFLDDSRHFTDAGSFFDDKRSAQSFLDDGFFKTEPKDGDCKASESAKILALKHELLDENHDLFRANKHHLLDEHCSELFKTEDGFFAESKPSADGTSKMNLDFLDDAQVFIEETRNASSPLSNAFFSATMSSAAEVKEALDEVLPNDDDDDIGVSEGDIDLYYLNGLSSLQSQMMPNSDDPLLAKKSKPSDVEASGTFGADASKAPLTVQTDPMPKDADSVFLSPSSLSSHSCSSSSSSSSSLSLSSVASPRLQHALLGSAHPAAGGVVWPRKRSQTSASSQSPSANSAAGTTPSHPAGQRKPTVYLSKLRRSTAALLPALHYTPAPMLNPERSGTAGLYASAAGGSVVEPDLDSTMDSTSDIFSEPPLPIRPRINLGPDYQATLPDCTRPAYAAPFQPGVPPVQRLWDPALAPNDRQLQRFIELARSSAAPLGCHSEENALRALLEANGEIHQAILGMLQGPPATIHRRWTADEIEQLIQGLEEYGKDFHRIARDLLPGKSTGDCVQMYYFWKKLGIDYGKGTTALAAGPKYGGLHGALSPTPSPPAPTPPVEDLLLDHLDYTASASAGATMPRGQQAGGSNSGHLQPNGHGSSTASDVRPHVCEVPDCSASFSSKAALHGHIRIHCIGRNHSTVQNGNFLSAAGNPINPNHIPTKDDYPCKVCGKVFNKVAHGRRGEGAHVAGAKRCYEYIKARTPLAGSPRKASQPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00100908;
90% Identity
iTF_00104317;
80% Identity
iTF_00095913;