Basic Information

Gene Symbol
CDC5L
Assembly
GCA_000473525.2
Location
AXCO02010560.1:491-3391[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-17 3.9e-14 52.3 1.8 2 46 9 54 8 54 0.97
2 2 4.7e-12 4.5e-09 36.1 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGCGTATTATGATCAAGGGTGGTGTTTGGCGGAACACCGAGGATGAAATCCTCAAAGCCGCCGTCATGAAGTATGGCAAAAACCAATGGTCCCGTATTGCGTCACTGCTGCATCGCAAGTCGGCGAAACAGTGCAAGGCACGTTGGTACGAGTGGCTGGATCCTAGCATTAAGAAGACGGAATGGTCCCGCGAGGAGGACGAAAAACTGCTCCATCTGGCCAAGCTGATGCCGACACAGTGGCGCACTATTGCACCGATCATCGGTCGTACGGCTGCGCAATGTTTGGAGCGATACGAATACCTACTGGATCAGGCGCAGCGCAAAGAGGAAGGCGAGGATGGGATGGATGATCCGCGCAAGCTGAAGCCGGGCGAGATTGATCCAAATCCCGAGACGAAGCCCGCTCGGCCGGATCCCAAAGACATGGACGAGGATGAGCTGGAGATGCTGTCGGAGGCACGCGCCCGTCTAGCCAACACGCAGGGCAAGAAGGCGAAGCGTAAGGCGCGCGAGAAGCAGCTGGAGGAAGCTCGCCGTCTTGCGGCACTGCAAAAACGGCGCGAGCTGCGCGCTGCCGGCATTGGGCTGGGCAACCGGAAGCGCAAACTGAAGGGCATCGATTACAACTCGGAGGTACCGTTCGAAAAGACACCGGCACCCGGGTTTTACGATACTACCGACGAGTTTGTGGTGCCGATAGCGGCCGATTTTTCCAGCTTGCGGCAGCAAACGCTCGACGGGGAGTTGCGCACCGAGAAGGAGGCGCGCGAGCGGAAGAAGGATAAGGAAAAGTTGAAGCAGAGAAAAGAGAACGATATTCCGACGGCGTTGCTGAAGAACCAGGAACCGGCCAAGAAACGTTCGAAGCTGGTCCTTCCGGAGCCGCAAATTTCGGACCAAGAATTGCAGCAGGTCGTGAAGCTTGGCCGGGCCAGCGAGATTGCCAAGGAGGTCGCTTCGGAAAGTGGCGTCGAAACGACGGATGCGCTGCTGGCGGATTATAGCATCACACCACAGGTGGCTGCCACCCCACGGACCCCCGCCCCGGTGACGGATCGAATTCTGCAGGAGGCTCAAAACATGATGGCACTCACACACGTAGAGACGCCTCTCAAGGGCGGGGTCAATACACCGCTTCACCAGTCGGATTTTTCGGGCGTGTTGCCCCAAAGCCAGACAGTGGCCACTCCCAATACCGTGCTGGCGACTCCGTTCCGCTCCGTCCGCGGACCGGACGGAAGTGCTACGCCGGGAGGCTTTTTGACACCGGCTTCCGGGGCGATGGTTCCCGTCGGCTCCGGCACACAGCCCCACCCACCCGGGGCAACACCAAATTTCCTGCGCGATAAGCTAAACATCAACACGGAGGACGGGATGAGTGTGGCAGAGACGCCGGCCGCTTATAAATCGTACCAGAAGCAGCTGAAATCGTCGCTCAAGGAAGGACTAGCTTCCCTTCCAGCGCCGAGAAACGATTACGAGATCGTGGTGCCCGATAACGAAGCGGACGAAGCAGCCGACGACGGTTCAATGGATGTGGAGCAGATGGTGCCGGATCAGGCGGACGTGGACGAGAAGCGCAAGCGCAACAAGCTTGCCCAAGAAGCAAAGGAGCTTTCCTTGCGCTCCCAGGTCATTCAGCGTGACTTGCCCCGCCCGCTGGAAATCAATACGACCGTGCTGCGCCCGTCGAATGAAATGCACGGGCTAACCGATCTGCAGAAGGCGGAAGAGCTGGTTAAGCAGGAAATGGTAAAGATGCTCAACTACGACGCGTTGCGCAATCCGATCCAACAATCGCAACCCGCGTCAATGAAGCGCCCCATGCTGAGCCAGTACCAGTCGTATCTGGAGCAGCATCCGTACGAAACGATCGACGAGGTGGAATTGGACGAGGCACGCAAAATGCTGACCGCGGAAATGGGTGTCGTGAAGCACGGTATGGCCCACGGAGACTTGTCGCTGGAAAGCTACACCCAGGTGTGGCAGGAATGCCTCTCGCAGGTGCTGTATCTGCCCAGCCAAAATCGCTACACGCGTGCCAACTTAGCCAGCAAGAAGGACCGTATCGAATCGGCCGAGAAGCGGCTCGAAATCAACCGAAAGCACATGGCCAAGGAAGCGAAACGGTGCGGCAAGATAGAGAAGAAGCTGAAGATTCTCACCGCCGGGTATCAGGCACGGGCGCAAGCGTTGGTCAAACAGTTCCAGGACACGAACGAGCAGATCGAGCAAAACTCGCTGGCGCTGTCGACGTTCAAGTTTTTGGCGGCACAGGAAGATTTGGCCATACCGAAGCGTTTGGAGTCGCTAACGGAGGATGTGATGCGGCAGACGGAGCGCGAGAAAACTCTGCAAAACCGTTACGCACAGCTGACCGAGGAGCTGGAGGAGCTTAACCATCTGCTGGAGGAAGCACGTGTAAATGGAGTACAGGAGCATGAGGAGAGTGGTAAGGAGCGGGAACCGCTTGTAAACGGTCGACTGGAGCATCGGGAGGAGGAGGAGAAAGAGGAACCGGTAGTAGATAATCCCACAAACGGACCGGAGGAAAGCAACGTGCAGGAGGAATCGTCCGATTCAAATGCAGCTGAAGATGAACCGCCAGAGAATGAAGGCGAAGGAAATGCTGAGGCGCAGGAACGGCAAAGCGAGAGCCCGGAGGAATCTGTCCCAGGACAGGATGGTGGTGAAAGTGAGGAAAATACTTCCGAAGGTCAAGAGAATCAGGAGCAGCAGCAGGATGAACCGATGGAACAAGACGACGACCAGAAGGATGCTTCTAATGAATAA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKEEGEDGMDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIGLGNRKRKLKGIDYNSEVPFEKTPAPGFYDTTDEFVVPIAADFSSLRQQTLDGELRTEKEARERKKDKEKLKQRKENDIPTALLKNQEPAKKRSKLVLPEPQISDQELQQVVKLGRASEIAKEVASESGVETTDALLADYSITPQVAATPRTPAPVTDRILQEAQNMMALTHVETPLKGGVNTPLHQSDFSGVLPQSQTVATPNTVLATPFRSVRGPDGSATPGGFLTPASGAMVPVGSGTQPHPPGATPNFLRDKLNINTEDGMSVAETPAAYKSYQKQLKSSLKEGLASLPAPRNDYEIVVPDNEADEAADDGSMDVEQMVPDQADVDEKRKRNKLAQEAKELSLRSQVIQRDLPRPLEINTTVLRPSNEMHGLTDLQKAEELVKQEMVKMLNYDALRNPIQQSQPASMKRPMLSQYQSYLEQHPYETIDEVELDEARKMLTAEMGVVKHGMAHGDLSLESYTQVWQECLSQVLYLPSQNRYTRANLASKKDRIESAEKRLEINRKHMAKEAKRCGKIEKKLKILTAGYQARAQALVKQFQDTNEQIEQNSLALSTFKFLAAQEDLAIPKRLESLTEDVMRQTEREKTLQNRYAQLTEELEELNHLLEEARVNGVQEHEESGKEREPLVNGRLEHREEEEKEEPVVDNPTNGPEESNVQEESSDSNAAEDEPPENEGEGNAEAQERQSESPEESVPGQDGGESEENTSEGQENQEQQQDEPMEQDDDQKDASNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00100902;
90% Identity
iTF_00095028;
80% Identity
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