Amel000923.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- -
- Assembly
- GCA_000473525.2
- Location
- AXCO02015823.1:5581-6573[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-14 3.2e-11 42.6 0.0 2 34 110 142 109 149 0.94
Sequence Information
- Coding Sequence
- ATGGTCAACAGCTACCAGTCGTCGAACCTGTCCACCCCGACCTCCCCGCAGGCCGGCAGCGATCAAACGGCCGGGCTGGTGTACAGTACCGGCACGCCGAATCAGTCCCCGCTCGGCACCACGACGGCCACCGCATCCGGCACGAACGCGAGCGGGAACGGCGGCAACGGGGCGGCGGCCGCGGCCGGTGGCAATGGAGCGGCGGGCGGCAACGGTGCGGGCGCAGGGACGGCGGGCAGTGGAGCTGGGGCAGCGGGGGGCGCGGCGGGTGCGGCCGGCGCGACCGTACAGCCGGTCAAGCGGAAACGGTCCGTCAACCCGCAGGGCGACGAGAACTTCCTGCGCGCGCTCGAGGCGGTCCGCTTCGGTGGCATCGGGTTCTGCAAAGCCGCCCGGCTGTACGGCGTGAACAATCGCACGCTCTGGCTAGACCTGCACCAGATGTCCCGGCAGCGATACCCGGACACGGCGACCGTCAACATGAACACGGGCGCCGTCAACCTGCAGGGGCTGAACTTTAACTCGATGTAA
- Protein Sequence
- MVNSYQSSNLSTPTSPQAGSDQTAGLVYSTGTPNQSPLGTTTATASGTNASGNGGNGAAAAAGGNGAAGGNGAGAGTAGSGAGAAGGAAGAAGATVQPVKRKRSVNPQGDENFLRALEAVRFGGIGFCKAARLYGVNNRTLWLDLHQMSRQRYPDTATVNMNTGAVNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00100237;
- 90% Identity
- iTF_00095584;
- 80% Identity
- -