Amel005443.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- lov
- Assembly
- GCA_000473525.2
- Location
- AXCO02007585.1:5146-7032[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-19 6.2e-16 57.6 0.0 1 44 21 64 21 65 0.96
Sequence Information
- Coding Sequence
- ATGTTGAATCGACCAAAGGGACAACACTCCGCACCCCGAGGTGGACCACCCCGATCTTGGACTAACGCAGAGCTCACCGAAGCACTGCAACATGTGTGGAACAAGAAAATGACTACGAGTCAGGCGTCGCGTATCTTTGGCATTCCTTACAATTCTCTGCTTATGTACGTGAGGGGCAAGTACGGCAAAAGTTTGAAGTTGGAACAGCTTCGAAAAGACTGCATCAGTGGGCCACCGATTGAATTACTCCAGATGGGTGTTAGTAATAGCAACAAGGACAAAAACAAGGAAAGCAAAGATTCCGACCTGCGTCACAGTCACCATTCAGGCAGCGGGGCAGGACGGGAAGGCAACAATGGCCCCAACGGTGGGGGGCACGGCGGAAATGGTGGTGGAGGGCCACGATCGGCATCATCCGAGCCCGATCTCTTGTCCAGCCCAAACCCATTGTTTAACCCTTTCCCCGGTGGCTTCTATCCGGATTTCCCGGGCGGATTTCCAGGGCTTCCGCTGAGCATGCTGAACCTTCTGCCACCAGAACGACACCCAGCACACACACTGCCGATGTCCGTCGATGAGGATTGTAAAAGTGACCGGTCGAAACAATCGCTGGACGATGATTTTCCGCAACCGCTAGCCCTAAATCGACCTTCATCGGAGCAGCTGGCGGACAGTCGCCGGGAGATATACCAGCAGAATGGGCAGGACTAA
- Protein Sequence
- MLNRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIELLQMGVSNSNKDKNKESKDSDLRHSHHSGSGAGREGNNGPNGGGHGGNGGGGPRSASSEPDLLSSPNPLFNPFPGGFYPDFPGGFPGLPLSMLNLLPPERHPAHTLPMSVDEDCKSDRSKQSLDDDFPQPLALNRPSSEQLADSRREIYQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095582; iTF_00102952; iTF_00106341; iTF_00100235; iTF_00097702; iTF_00092755; iTF_00098934; iTF_00099593; iTF_00095022;
- 90% Identity
- iTF_00097702;
- 80% Identity
- -