Achr005673.1
Basic Information
- Insect
- Anopheles christyi
- Gene Symbol
- lov
- Assembly
- GCA_000349165.1
- Location
- KB697436:1962-3174[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-19 5e-16 57.4 0.0 1 44 42 85 42 86 0.96
Sequence Information
- Coding Sequence
- ATGGGAGAAAGAATAAGACTGCAGGAGACACTCCTGTCGACCGAGGTGATTCGAACTACCGCACAAGTGAACCGACCAAAGGGACAGCATTCTGCACCCCGGGGTGGACCACCCCGATCTTGGACCAACGCAGAACTCACCGAAGCGCTGCAGCATGTGTGGAACAAGAAAATGACTACGAGTCAAGCGTCGCGTATCTTTGGCATCCCGTACAACTCTCTGCTAATGTACGTGAGAGGCAAGTACGGCAAAAGCTTGAAATTGGAACAACTTCGAAAAGACTGCATCAGTGGGCCACCGATTGAGCTGCTACAGATGGGTGTCGGCAATAGCAACAAGGACAAAAACAAGGAAGGCAAAGATTCCGACCTGCACCGCAGTCACCATTCGGGCAGTGGGGCAGGGCGAGAAGGCAACAACGGCCCTAATGGAGGTGGTGGCGGCCACGGAGGCAATGGTGGTGGAGGGCCGCGGTCGGCATCCTCCGAACCGGACCTCCTATCTAGCCCGAATCCTTTGTTCAACCCGTTCCCTGGAGGCTTCTATCCGGACTTCCCGGGTGGATTTCCGGGGCTACCACTAAGTATGCTGAACCTTCTGCCACCGGAACGACACCCACCGCACACGCTGCCGATGTCCGTCGACGAGGATTGTAAAAGTGATCGGTCAAAACAATCGCTGGACGATGATTTTCCGCAGCCACTAGCCCTCAATCGACCTTCATCAGAGCAGCTTTCGGACAGTCGCCGGGAGATATACCAGCAGAATGGACAGGACTAA
- Protein Sequence
- MGERIRLQETLLSTEVIRTTAQVNRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIELLQMGVGNSNKDKNKEGKDSDLHRSHHSGSGAGREGNNGPNGGGGGHGGNGGGGPRSASSEPDLLSSPNPLFNPFPGGFYPDFPGGFPGLPLSMLNLLPPERHPPHTLPMSVDEDCKSDRSKQSLDDDFPQPLALNRPSSEQLSDSRREIYQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104302;
- 90% Identity
- iTF_00097702;
- 80% Identity
- -