Amac005594.1
Basic Information
- Insect
- Anopheles maculipalpis
- Gene Symbol
- Hr39
- Assembly
- GCA_943734865.1
- Location
- CALSEK010000084.1:451354-454597[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.57 3e+03 -2.9 3.3 117 150 56 89 44 146 0.65 2 5 0.79 4.2e+03 -3.4 1.1 141 141 229 229 109 279 0.60 3 5 0.48 2.5e+03 -2.7 1.1 59 131 371 392 326 427 0.46 4 5 5.3e-08 0.00028 20.2 0.1 1 21 578 598 578 610 0.92 5 5 1.6e-79 8.3e-76 255.8 0.0 157 408 679 940 667 940 0.91
Sequence Information
- Coding Sequence
- ATGAGAATAATGACATCGACAGAGGTAAACGGAGGCGGTGGCACGCCCACGGCCACACGCGGCGGAAACGTGTCCGTGACGACGATCAACTGTGACGATGGTGGTACGGGCGGCACAACGTTGGACGTTAGCAGCGGCGGTGTAGTGGCCGCGATCAAGCACAACAATAACAACAACAGCATCAGTAATAACAACAACAACACGACTAGTAGTAATAGTGTGAATAATAACACTAGCACTACTACTACCACGAGCAGCAGCACTGGTGGTAGCCCTGGTGGTATCTTTGGAAACGTGAGCGGTGGAATACGCATCACCGTGCCGAAGATGGAAGAGTCGGACGAGTCCGATACGGAGCTGTCGAACATCGAGAAGACGGCGGCAGCAGCACTGACGAACGGGGTGAATATGCGCGAGGAACGCAGCGCCAGTAAGAGCCTTCCTCGACCGATGTCCTGGGAGGGCGAACTTTCGGAGCCGGAGGAACCGATGCTGGTGGACAATGAGAATTCTAGCTCCAGCTCGACTGGTGGCAGTAACAAGCACGGGATAGCACCGATCGATCCTTCCCCGATCGCGATGATTGTACCGAAGCGTGAGGAAGATCTGGAAAACGATGTACCTACATCCGGGCCGGGTATTACGGAACCGCTGGCACTTACCGCTTCCAGTAGTAGTAGCAGCAGTAGCAGTAGTACCGGCGGATATAACCTTTCCTCCCATGGAAGTAGTCAGAGTGGTGGTACGATTCGGAATCCTCACAGTAGCAGCAATACCGGTAGTAGTAGCTCCAGTAACTCCCCATTGCCGAATCGGCTTATGATCAAACCGGAAGCGGGGCTTCCACTGATCAACCCCGGGCTAGCGTACAACGTGTCCGGTTTCGGGAACTCCTCCAACATTCCAACGTCTTCAGCGGCAGGTACGTCGTCATCCGGTGGGCTGAAGAAGGCCGGACTTCCGGATGTGATAAATCTTAAGTACGAGCTACCCCCCGGTGGTGATCCAAGCGGTGGTAGTGCATTGCCACCGAGTGCGATCCACTCACCGTTGTTGGTACGGTCGAAGACAACGCTGCTGCCCGCGAATCCCAGTCCCGACTCAGCCATCCACTCGGTGTACACGCACAGTTCGCCAAGCCAATCGCCACTCACATCCCGCCATGCACCGTACACGCCATCGCTCAGCCGGAACAACAGTGATGCGTCCCACAGTAGCTGCTACTCGTACAGTTCGGAGTTTAGTCCGACCCATTCACCGATCCAGGGTCGGCACAATATCTTTGCCGGTGGAGGTGGTGGTGGTGGAGGTGGCGGTGGAGGAGGAGGTAGTGCATCCTTCAATGGATCACCGTTGCATCACTCAGTATTATACAAACCGATGCTGGATAGCGAGCAGCAGCAACAACAAGCCCTGAAGCAGCTGGCTGCAGCGGCGGCGGCAGCGGCCCAAGAAGAACCGCTGTACGATGGGGAACATTTACCTTCGCCCGGGATATCTCGGCAGCAGCTTATCAACAGTCCAtgtccgatctgtggcgataagatatccggcttccattatggcattttctcgtgtgagtcgtgcaagggcttcttcaagcgtacggtccagaaccgtaagaactacgtgtgccttaggggggcggcctgtccggtgacgatagcgacacgcaaaaagtgtcccgcctgccggttcgagaagtgccttcagaaggggatgaagttggaagCTATACGGGAGGATCGAACACGTGGAGGACGCTCAACGTACCAGTGCTCGTACACCTTGCCGGGACCGTTGGTAAACGCGGGCGGTGGAATGCAAGCAGGTGACTCACCAGGAGCGGGATCATTCCAGTACGGTGGTACGGTACGATCACCGTACGTTGGAGGAGGTTCTGGTCTTGGTGGTGTTGGAGGACAACAGATGAAGATGGAACCACCGGACGGTGGTATGATGATGGTTGGATCGGGATCCATCGGTGGTGGAGGTATGAATGGAATAGGCAATGGACCCGGTTCTGAAGGTGGTAGTAGCTCCAGTGGAGCTAATCACATGCAACCAGGCATTCCAGTTCTGTTACAGGAAATTATGGACGTTGAGCCACTGTGGCAGTATAATGCACAGGAGCTTGCCCGACTCAACCAACCTCCAACGAACGTAAGCAGCACAACGATCGCCAACAATCCGATCCTGTCGAGTGCAGGGATCTCGTCCGATAGTAGTCCCGATCTGATCGCTAACCTCTGTAACATTGCCGACCACCGACTGTACAAGATCGTCAAGTGGTGCAAAAGTCTACCACTCTTCAAGCACATTTCCATCGACGATCAGATCTGTCTCTTAATAAACTCTTGGTGTGAGCTGTTACTGTTTTCGTGCTGCTACCGTTCAATCTCGACACCGGGCGAGATTAAGATTTCCCAGGGCAAATCGATCACGCTGGATCAGGTGAAGAATAGTGGTTTGCAGACGTGTATTGAGCGAATGTTAAATCTAACCGACCATCTGCGACGATTGCGCGTCGATCGGTACGAGTACGTGGCGATGAAGGTGATCGTATTGCTCTCTTCGGACACATCCGAACTGAAGGAATCGGAAAAGGTGCGGACGAGCCAGGAAAAGGCGCTCCAAGCGTTGCAAGCCTACACACTGGCCCACTATCCCAAATCGCCTGCCAAGTTTGGGGAGTTGCTGCTGCGTATTCCCGAGCTACAGCGCACCTGTCAGGTCGGCAAGGAAATGCTCACAATCAAGCCGAAAGATGGCGAAGAGCCATCGTTTAACCTGCTAATGGAACTGCTCCGTGGCGAGCACTGA
- Protein Sequence
- MRIMTSTEVNGGGGTPTATRGGNVSVTTINCDDGGTGGTTLDVSSGGVVAAIKHNNNNNSISNNNNNTTSSNSVNNNTSTTTTTSSSTGGSPGGIFGNVSGGIRITVPKMEESDESDTELSNIEKTAAAALTNGVNMREERSASKSLPRPMSWEGELSEPEEPMLVDNENSSSSSTGGSNKHGIAPIDPSPIAMIVPKREEDLENDVPTSGPGITEPLALTASSSSSSSSSSTGGYNLSSHGSSQSGGTIRNPHSSSNTGSSSSSNSPLPNRLMIKPEAGLPLINPGLAYNVSGFGNSSNIPTSSAAGTSSSGGLKKAGLPDVINLKYELPPGGDPSGGSALPPSAIHSPLLVRSKTTLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNIFAGGGGGGGGGGGGGGSASFNGSPLHHSVLYKPMLDSEQQQQQALKQLAAAAAAAAQEEPLYDGEHLPSPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTIATRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPGPLVNAGGGMQAGDSPGAGSFQYGGTVRSPYVGGGSGLGGVGGQQMKMEPPDGGMMMVGSGSIGGGGMNGIGNGPGSEGGSSSSGANHMQPGIPVLLQEIMDVEPLWQYNAQELARLNQPPTNVSSTTIANNPILSSAGISSDSSPDLIANLCNIADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCYRSISTPGEIKISQGKSITLDQVKNSGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLSSDTSELKESEKVRTSQEKALQALQAYTLAHYPKSPAKFGELLLRIPELQRTCQVGKEMLTIKPKDGEEPSFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00097815;
- 90% Identity
- iTF_00097815;
- 80% Identity
- iTF_00103734;