Basic Information

Insect: Anopheles koliensis
Gene Symbol: -
Assembly: GCA_000956275.1
Location: JXXB01013340.1:4246-7733[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0021 0.18 12.3 3.6 1 20 142 161 142 164 0.93

2 17 3.8e-05 0.0033 17.8 1.8 2 23 229 250 228 250 0.97

3 17 0.73 62 4.3 4.7 1 23 257 280 257 280 0.79

4 17 2.8e-05 0.0024 18.2 2.6 1 23 294 316 294 316 0.97

5 17 0.032 2.8 8.6 2.8 1 23 322 345 322 345 0.96

6 17 3.6 3e+02 2.2 0.2 1 23 473 496 473 496 0.90

7 17 3.5e-06 0.0003 21.0 1.0 1 23 524 546 524 546 0.93

8 17 1.3e-05 0.0011 19.2 1.7 1 23 552 575 552 575 0.98

9 17 0.077 6.6 7.4 2.7 1 23 584 607 584 607 0.97

10 17 0.0006 0.051 14.0 2.1 1 23 769 791 769 791 0.95

11 17 0.018 1.5 9.4 2.8 1 23 797 820 797 820 0.95

12 17 0.0087 0.74 10.4 0.9 1 23 831 854 831 854 0.97

13 17 5.7 4.9e+02 1.5 2.1 1 14 880 893 880 903 0.76

14 17 2.3 2e+02 2.7 5.1 2 23 920 941 919 941 0.95

15 17 3.6e-06 0.0003 21.0 2.3 1 23 966 988 966 988 0.98

16 17 0.00042 0.035 14.5 0.2 1 23 994 1017 994 1017 0.96

17 17 0.0015 0.12 12.8 0.9 2 23 1033 1055 1032 1055 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0021	0.18	12.3	3.6	1	20	142	161	142	164	0.93
2	17	3.8e-05	0.0033	17.8	1.8	2	23	229	250	228	250	0.97
3	17	0.73	62	4.3	4.7	1	23	257	280	257	280	0.79
4	17	2.8e-05	0.0024	18.2	2.6	1	23	294	316	294	316	0.97
5	17	0.032	2.8	8.6	2.8	1	23	322	345	322	345	0.96
6	17	3.6	3e+02	2.2	0.2	1	23	473	496	473	496	0.90
7	17	3.5e-06	0.0003	21.0	1.0	1	23	524	546	524	546	0.93
8	17	1.3e-05	0.0011	19.2	1.7	1	23	552	575	552	575	0.98
9	17	0.077	6.6	7.4	2.7	1	23	584	607	584	607	0.97
10	17	0.0006	0.051	14.0	2.1	1	23	769	791	769	791	0.95
11	17	0.018	1.5	9.4	2.8	1	23	797	820	797	820	0.95
12	17	0.0087	0.74	10.4	0.9	1	23	831	854	831	854	0.97
13	17	5.7	4.9e+02	1.5	2.1	1	14	880	893	880	903	0.76
14	17	2.3	2e+02	2.7	5.1	2	23	920	941	919	941	0.95
15	17	3.6e-06	0.0003	21.0	2.3	1	23	966	988	966	988	0.98
16	17	0.00042	0.035	14.5	0.2	1	23	994	1017	994	1017	0.96
17	17	0.0015	0.12	12.8	0.9	2	23	1033	1055	1032	1055	0.94

Sequence Information

Coding Sequence: ATGAAGCCCGAGCAGGAACCCGAACCGGTCGTCGACGATGATCCGGTGGACGTCCCGAATCCGAACGCCGAATCGTACTGCCGGTTCTGTTTTTCGGAGAACGAAGTGGAACCACTCTTCTCGGCGAACGGCAGCCAGGCGAGCGCGGACCTGCTGGAACGCATCTACGACTGCATCGGCATAAGACTGACGAAGAAAGAATACTGCCCCAGCGCCATTTGCTGGTCGTGTACGCTGACGATGGAAGAGTTCCAGTGCTTTCGCAAACGCTGCCTCAAGTTCGATGCGCTGGTGCGCCGCCTACGGCCGACGGTGAAATCGGAACAGGGGTACAGCGGGTCGACGGACCACCACAAACCGTTCGGCCGGCAGCAAGATAAGGCAGCTAAAAAAGTGGCCAACGCGTCGTCTGAGGTGCGCTCGTTCCATTGCCAGTATTGCCCCCGGACCTTCAAGCAGCGAATGTATCTCGATCAGCACATGTGGAAGCATCGGGATCGGGTCGCCGCCGAAGCGGCCACCAGCGTCAATAAgcggtccggttcggtggcggtgaaCGGTAGCGGGAACGGTTCGATGGTGGTGATCAAAAAGGAACCGATCGTGGCGAGCAGTAGTACTCCGACGCCTCCGGCCCCACCGGTCGCCACCGCCCCGACCGGCTCGCAGGTGGATCGCCCGATAAGCTGCGAGTACTGTCCGCGAAAGTTCACACGCCGCATGTACTACATGCAGCACCTGCGCAGACACAAACCGGAAGAGCGTCTGTTCCGGTGTCGGCACTGTACGCGCAGTTTCACGTCGCACATGAGACGCGTCGGCCACGAGCGCAAAATACACGGGTACTTAAGCAATCCCAAGCTGGAGGAAAAGGATTCGTTCTCGTGTCCGaagtgtgcgcgcgtgttcaAGCATCGATCGTCGCTGCGGATGCATCTGCTCAACCACGACGGTCAGCTGCCGTATGCGTGCGACATCTGCAACTGTCGCTTCTACAGTGTAAGCTACCTGGGGCTGCATAAGAAGCGTTACCACGGCCCGAACGCGGCCCGGTCGGTGGCCAACGGGACCTCCATTCCGTGTCTGTACTGTACGCGCTGGTTTTTGCGCGAGTGTGACCGATCGAGTCACATCAAGCAGATGCACGCGGACATGCACGCGAGCAAGGCGTCGGCGGCCGGTTTCAACGAAATGCTCGCCGATTGCCCGCCGGCCGATAGCGAGGGCATGATCGACGATCCCGAGATGCTGCCGCCGAACGTACACGAACCGATGATGGTCATCAAGGAGGAGGAACCGGATACGGCTGTCGTTGCCGCCAGCGCGGCCGCCGTCGCCGAGGccgccgttggtggtggtggtgtcaaTGATTCTACCGCCTCGTTAGCTTCACTCGCAAATCCGGGCGCATTCCAGTTCTACTGCTACTCCTGCGCCATGCCTTTCGACACCGAGGACATGTACTCGGAGCACCTGGACGATCAGCATCCGTTCGGGGGCGAGCAGTTGATGGATCAGCTGCAACCGTCCTCGTCGCCGGTCGAGCTGGACGAAAATGGTACGAAGGTGTTCCGCTGTCCGTACTGCCCGAAAACGTTCACGCGCAAATGGAGCATGACGCAACACATTCCGACGCATCTCGGGCGGAAGGGCTACAAGTGCGAGTACTGTCCGGCCATCTTCACCCGCAACGAGTACCTGCGGACGCACCGGCAGCGGAAACATCCGACGCTCCCGGAAACGGGCACGTACAAGTGTAGCTACTGTCCGCGGTTGTTCCACAAGGCGCGCTACAAGAAGGTGCACGAGCGGATCGCTCACATCAAGAAGGGGGACGTGCTGCCGGACGGGGACGATACGGAGGAGAGCGAACTCGTCGCCCTGACCGGTGCACCGTCCGGTGAGAAGCTGGACGAAAGTAGCTGCAGCATCGCATTCGACCCACCGTCCCGTGCGTCGGACAGTTTCGATCAAACGTCGAACGATGCGCACAGTGTGGCTGGGTCCGGGTGTGGCCCGGTTCAGCCCAACTACTCCGATCTGGAAGCGTCGGCGCGACTCGTGGTCGTGCTGGAGCGAATGCCACCGGAGCTGGTGGAACAGTACCGTTGGCAGATGGAGCTGTACGCGAACATGACGCCGGAAGAGCTGACGGCGGCccattcgtcgtcgtcggcggatGAAACGTCCGCCGTGGATGATGCGCTTGACGATGATAAGCTCGAAGTGCGGGCCGATCTGGAACCGGCACCGACCGCCGCACCGGTGTTCAAGCGAAAGCGCAGCAAATTCGGTATCACGCTGCACCCGTGTCCGCATTGCTCGAAGTTGTTTAAAACGCGTGGCGCACTGCGATTGCATGCTCTCTACCACAGCGGCGAGCTGCCGCACCGTTGCGACGAGTGTGGCGTACAGTTCATGCGCTACAATCAGCTCGAGTATCACAAGACGCGCTACCACGGTGTGAACAGTGCGACGATGGCCGCGCGCTACAGCTGCGACTACTGTCCGCGGATCTTTCTGCGGAAGCAGGATCGCACCACGCACCAGATGATGGTGCACGCGCGCGATCATGCCGACGCGATCGACGTGTCGCCGGGACCGACGCGGGTGcactcgaaatcgaaacggaagGATTACGTGTGCCGAACGTGCGACGAAGAGTTCGACACGTACCGCATCTGCCAGCGGCACATCTTCGTGCAGCATCCCGCCGTCGAGGGCGGCCCGGCGGTGGACAAACCGATGAAGCTTTGCCACTGCAGCATATGCAATGGGATTTACAAGAAACGGGACGATTGGCACGAGCATCTGAACAACCACCCGAGCGTGCGGCCCCATCACTGCGAACAGTGCATCCGGAGGCGACGGAAGGCATCTAGCCGGAAGCAGGTGCACCGCTGCTCGTACTGTCCGAAAGCGTTCGAGCACAAGCCGAACCTGGCGTCGCATCTGCGCATCcacaagcagcagctgcgGTTCCCGTGCACCGAGTGCGGTGTTATGTACGATCGGTACCGCGATCTGTTGGCGCACCAGAGCCGATACCACTCGCAGGACCCAGCGGACGGTGGGGCGAACCGGGAGCCGCTGCAGAAGTGTAACTTCTGTCCGCGCGTCTTTACCCGTTTGCGGGACGTCAAGTACCATCAGGAGCAGGTGCATGCTGATCAAGCGATCCCGATCGAGCAACCCGTGCCGGAGGAAGATAATAATGACCGCGAGCAGCAGGCCATCggtgatgacgacgacgacgacaacgatgccGACAACGTCGAAGAGGAGGACGAACTGCCGAAGACGTTCGGGTTTGGACCGGAAATGTTCCCGGTAACGAATGATGGGCACGTGCCAGCAGGCGACAACGACCAACAGCCCAtcaaaccggaaccggaacgctCACCATAG
Protein Sequence: MKPEQEPEPVVDDDPVDVPNPNAESYCRFCFSENEVEPLFSANGSQASADLLERIYDCIGIRLTKKEYCPSAICWSCTLTMEEFQCFRKRCLKFDALVRRLRPTVKSEQGYSGSTDHHKPFGRQQDKAAKKVANASSEVRSFHCQYCPRTFKQRMYLDQHMWKHRDRVAAEAATSVNKRSGSVAVNGSGNGSMVVIKKEPIVASSSTPTPPAPPVATAPTGSQVDRPISCEYCPRKFTRRMYYMQHLRRHKPEERLFRCRHCTRSFTSHMRRVGHERKIHGYLSNPKLEEKDSFSCPKCARVFKHRSSLRMHLLNHDGQLPYACDICNCRFYSVSYLGLHKKRYHGPNAARSVANGTSIPCLYCTRWFLRECDRSSHIKQMHADMHASKASAAGFNEMLADCPPADSEGMIDDPEMLPPNVHEPMMVIKEEEPDTAVVAASAAAVAEAAVGGGGVNDSTASLASLANPGAFQFYCYSCAMPFDTEDMYSEHLDDQHPFGGEQLMDQLQPSSSPVELDENGTKVFRCPYCPKTFTRKWSMTQHIPTHLGRKGYKCEYCPAIFTRNEYLRTHRQRKHPTLPETGTYKCSYCPRLFHKARYKKVHERIAHIKKGDVLPDGDDTEESELVALTGAPSGEKLDESSCSIAFDPPSRASDSFDQTSNDAHSVAGSGCGPVQPNYSDLEASARLVVVLERMPPELVEQYRWQMELYANMTPEELTAAHSSSSADETSAVDDALDDDKLEVRADLEPAPTAAPVFKRKRSKFGITLHPCPHCSKLFKTRGALRLHALYHSGELPHRCDECGVQFMRYNQLEYHKTRYHGVNSATMAARYSCDYCPRIFLRKQDRTTHQMMVHARDHADAIDVSPGPTRVHSKSKRKDYVCRTCDEEFDTYRICQRHIFVQHPAVEGGPAVDKPMKLCHCSICNGIYKKRDDWHEHLNNHPSVRPHHCEQCIRRRRKASSRKQVHRCSYCPKAFEHKPNLASHLRIHKQQLRFPCTECGVMYDRYRDLLAHQSRYHSQDPADGGANREPLQKCNFCPRVFTRLRDVKYHQEQVHADQAIPIEQPVPEEDNNDREQQAIGDDDDDDNDADNVEEEDELPKTFGFGPEMFPVTNDGHVPAGDNDQQPIKPEPERSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00106537;
90% Identity: iTF_00100488; iTF_00106537;
80% Identity: -