Basic Information

Gene Symbol
TRERF1
Assembly
GCF_000005575.2
Location
NT:14312602-14358238[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-11 5.5e-08 32.3 0.1 2 45 1657 1701 1656 1702 0.91

Sequence Information

Coding Sequence
ATGTGTAGTGCCTCGATGGGTGCGGAAGGTTCCGTCACACTTCAGCTCCGGGAAGCGGTACAGGCGCCCGATGCGGCCGGCTCCCTCGATGGAGCGCTCACGATCGGCTACCCGGATCCGGACATGCTAGCCGACATGCTGGGCACATTCCAGGGCGCATCGACCGGTGCGTCCGGCGACCCGGACGCGGGCAGcttcgagctgctgcaggaCAGCAATGGCAGTCCGGCCGGCGCTACCTTGCGCACGTCGGCAGCcgagcagctcgagcagctggcCGGTGCTATCCTGACCAAGGCGAACAGCAgtggtagcagtagcagcaacgcGACAACCGGTGCGACAACGGTGACGATAAAAACAGAACCGGGGCCGAAATCAACCGCGGAAAAAACGAGCACAACCACCAACCTGCACCCGACCGGCCTCACACCCACCAGtagcatcggcagcagcaacctGTCTCCCTCGTCGACGGCCATCCTGCACCACGGCACCACGATGGTGACCGTGAAAAGCTCGCCCGGAGGAAGCGGCGGTACCATTGCGACCGCCGCCAGCCCAACCAGCCTCATCCTTACGACGGTCGGGCGGGCCGAGACGGCGTCGGGCGGTTTCGGtggaggcagcagcagcagcgcatcgTCGTCACCGTCGGCGGCTGCCTCCCCCGTCTCGCTGAGCGGACTGGCGAAGAAACCGCGACCCAAGACGGTATCACCGACCCGGCACGGACCGCAACAGTGTCAGGTCTGCAGCAAAGTGTTCGGCAATGCGTCCGCCCTCGCCAAACACAAGCTAACGCACAGCGACGAGCGGAAGTACGTGTGTGGCATGTGCTCGAAAGCGTTCAAGCGGCAGGATCACCTCAATGGCCATATGCTGACGCATCGTAACAAAAAACCGTACGAGTGCAAGGCGGACGGCTGCGGCAAATCGTACTGTGATGCGCGATCGCTCCGGCGCCACACCGAGAACCACCACAGTGCGCTCGGGCTGGCGAACTCGTCCGGCACGGCCAGCCCCGGCCCGGGTGGCAGCAATGCTGGACCGCCCGGGGGGCTCAGTCTGTCACCGGCGACGGCAAGTGGCGATGCGAGCTCACCGCACGGAGCAACACTGGTCCAGTACACGACCACGACCGGCAGCGGAAcgcccggcagcagcagctccaacTGCAGTCTTTCGAGCAGCAGTTCGAGCAGTAGCTcgagtagtagcagcagcagcagcagcagcagtagcagtggaAACGTCAGCGACTCTAGCTCCAGCTGCAAATCGCCCTCGCCAAGCTCGCCGGCACCCGGCGCAGGCAATGAGGGACTTACCCGCCAACAGCTCGATCTAATTTCCCAGATCATGCAGCAGACGAAGCAGGCGAATgcggcagctgctgcagccgccgccgccgccgctacctccaccaccacgaaCGGTAGCAGCTCGGTACAGTCCACCAGCCAGAAGCTATCCGCATCGACCACGGTGGCAGCGACGACAGCACCGACGGTCGTCAGCGCCGTCCCCGTGCCTTCAATGGCAGTCACAGCGACGACCACACTCTCCGCCTCGAACAGTGGCGCCACCATCGTGTACCAGAACGGAGGAACCCTTAgcggcaacggcagcagcatcatcagcaagGCGACAAACGCTGGCAGTGCTAGTGCCGATCCTAATGGACCGGTGACGGCAACCCTCACGGTGTCATCGTCGTCTGCGGCCAGTACGTCCTCGCTCAGTGCGGTCAGTGCGGTTTCGGCGACCACGCTGACGGCTGGGACAGCAGGACCGGGTAGTGGCAgctcttctgctgctgctgctggtgctgctgctacccaACAACCTGCCACCGGTACCACCGCTACcacaactaccaccaccaccactacgacCGCTACCAAGCTGGAGCAGAAGCCGGTCGAGTGTAATCTGTGCCACCGGAAGTTCAAAAATATTCCCGCCCTGAACGGGCACATGCGACTGCACGGCGGCTACTTCAAGAAGGACTCGGAGGCGAAGAAATGTGATAAGAAGGAAAACACGGGCCCGCCGCTACAGACGGCGAGCGTGGGAGTGCGGGCACTGATCGAGGAGAAGATTATCAACAAGCGCAGCAAGGATTTGAAGtatgcaatttgttgCTTCGCCTGTCCAAAAGAGTTTTGGTGCATCATTTTAACGCTCCGAACGTCCCTTCTTAAACGATCCCTCACGCTGCATGCATCGATACACTTGTCGTCTCTTTCGTTGTctcttccgttccgttccctAATGTGTTgtggtatttttttactttatttttttttccattcggTGTACCAATTCCGTGCCACCCCCGCGGCATTTGCCACGGTCGCGATCGTCTCCACGTCGAACGGCACCACGCAGATCATCAACACCGCCACCCTGCACTCCAAGGCGACCGTGCTGAGCGTCAGCAGTGCGCCGCCGCCctccaacaacaccaccacctcgACCACCCTCGCGCCCTCGATAACGATCAACGGGCTGGGGGCGGCGGGCGCAGCAACGGAGCTGAAGGATGCGACGCTCATCGAACTGCTCAAGCGCGGCACCAAGGTGGCCGTCAAGCGGGCGATGGCGAGCGGTGACACCTCCACCGTGCTCTCACTACAGTCACAAGCAACGCCCAACCCAACGGTGACGGTGGTTTCGACCGCGAGCAGCACCAACCCTGCCCAGCTGCTCACGTCCGCCAACACGCGCACGCTTACGGTTGTCCCGACCGGGCCGACgctttccaccagcaccaccaccggcaagCAGTCCGGTCAAACGATCGCCGGCCCAACCCTGCTGGCCAATGCCACCGCCAGCACCGAGCCGACGCCACTGTCGCTAACCATATCGCAAGCGCCGGCCACGACCCCCGGCGACGTGTTCACCCTCGCCTACTCGACCGACTTCGGCGACGGCGATGTGTACAGCGTGAGCGACACGGCCATGCTGCTGCAGGCCGTCGATCCGATCCAGCTGCTGCACGACTCCAACTCGGCCGAGCCGCTCGACGAGATCGCCCTGTCCGACTACGGCTCGATCAGCGACCAGGGCTTCACCCCGTCCCGCCAAATCCAGGCCGTGCTCGACTCGCCCCTGCCCGAGGGATTGGCCGAGTTTAGCGCCCTGCACGGCAAGGACTTTAGCGTCCTGTACGGTGGCACCGGTGCGCCCTCCAGCGAAccgaacggcagcagcagcaccaccaacaccagcgCCCTACTACAATCATCCCCCTCGGGGGCGCATCTTTCCCCGCTACCCTCACCGCTAGCCTACCCAACGCCACCGGCATCGCACGAAGCGGTCGCTCAAGCGTCGCCCTTCCTGGACGACTCGCGCCACTTCACCGACGCGGGCTCCTTCTTCGACGACAAGCGCAGTGCGCAAAGCTTTCTGGACGATGGTTTCTtcaaaaccgaaccgaaggaCGGCGACTGCAAGGCGTCCGAGAGCGCGAAGATACTGGCGCTCAAGCACGAGCTGCTGGACGAAAACCACGACCTGTTCCGGGCGAACAAACACCACCTGCTGGACGAGCACTGCTCGGAGCTGTTCAAGACGGAGGACGGGTTCTTCGCCGAGTCGAAACCGTCGGCGGACGGGACGTCCAAGATGAACCTGGACTTTCTGGACGACGCGCAGGTGTTCATCGAGGAGACGCGCAACGCGTCCTCCCCGCTGTCGAATGCCTTCTTTTCCGCCACCATGTCGTCGGCGGCGGAGGTAAAGGAAGCGCTCGACGAGGTCCTGCcgaacgatgacgatgacgacatTGGCGTGTCCGAGGGCGACATCGACCTGTACTACCTGAACGGCCTTTCCTCGCTGCAGTCGCAGATGATGCCCAACTCGGACGATCCGCTGCTGTCCTCCTCGCCGAAGGACTTTGCCCACCGGCAGCACCAGAAGTTTCTGTTCGAGCAGAGCCAGgcggcccagcagcagcagctcgcccagcatcagcagcagctgcagcagcagcagcagcagcagcagcagcagcaacagcagcaacttcagcagcagcagcagcaacaagcgggtgttaccaccaccaccaccaaccaccactgTATGCCTCCCAGTGCCAAAAAGTCCAAACCTTCCGACGTGGAAGCGAGCGGCACGTTCGGGGCGGACGCCAGCAAAGCACCACTCACGGTCCAAACCGACCCGATGCCAAAGGATGCCGACAGCGTGTTTCTCAGCCCGAGCAGCCTGTCCTCGCACAGCTGCTCCTCCtcttcgtcctcctcctcctcgctgtCGCTCTCGTCCGTAGCGTCGCCCCGGCTGCAGCATGCACTGCTGGGCAGTGCCCACCCGGCCGCCGGTGGTGTCGTGTGGCCCCGCAAACGCTCCCAAACATCAGCGTCCTCACAGTCGCCCTCAGCCAACAGTGCCGCCGGGACCACCCCATCCCATCCCGCCGGTCAGCGCAAGCCGACCGTCTATCTGTCGAAGCTGCGACGATCCACGGCGTCACTGCTGCCCGCCCTGCACTACACGCCCGCCCCGATGCTCAACCCGGAACGGTGCGGCACGGCCGGGCTGTACGCGAGCGCGGCCGGCGGCTCGGTCGTCGAGCCCGATCTCGACTCCACGATGGACAGCACGAGCGATATCTTTTCCGAGCCGCCGCTGCCGATCCGGCCGCGCATCAACCTCGGCCCCGACTATCAGGCGACCTTGCCGGACTGTACGCGCCCGGCCTACGCGGCCCCGTTCCAGCCCGGCGTCCCGCCGGTGCAGCGGCTCTGGGATCCGGCGCTCGCGCCAAACGACCGCCAGCTGCAGCGGTTCATCGAGCTGGCCCGTTCGTCCGCCGCACCGCTGGGTTGCCACTCGGAGGAGAATGCACTGCGCGCCCTGCTGGAGGCGAACGGTGAGATACACCAGGCGATACTGGGCATGCTGCAGGGCCCGCCCGCCACCATCCATCGCCGGTGGACGGCGGACGAGATCGAGCAGCTGATACAGGGGCTGGAAGAGTACGGCAAGGACTTCCACCGGATCGCTCGCGATCTGCTGCCCGGCAAGTCGACGGGCGATTGCGTGCAGATGTACTACTTCTGGAAGAAGCTCGGCATCGACTACGGCAAGGGTACGACGGCGCTGGCTGCCGGGCCGAAGTACGGTGGGCTGCATGGGGCGCTTTCGCCTACACCGTCACCACCGGCACCAACGCCCCCGGTAGAGGATCTGCTGCTCGATCATCTCGACTATACGGCCTCGGCAAGCGCGGGAGCGACGATGCCCCGGGGGCAACAGGCTGGCGGGTCGAACAGTGGCCATTTGCAGCCGAATGGGCACGGTAGTAGCACGGCCAGCGACGTCCGACCGCATGTGTGCGAGGTTCCTGACTGTTCAGCGAGCTTCTCGTCCAAAGCGGCCCTTCACGGGCACATTCGCATACACTGCATCGGGCGTAACCACAGCACAGTTCAAAATGGTAATTTCTTGAGTGCCGCCGGTAACCCCATTAACCCTAACCACATACCGACAAAGGATGACTATCCCTGCAAGGTGTGCGGCAAGGTATTCAATAAGGTAAAAAGCCGAAGCGCTCACATGAAGTCACACCGGCCGCAGGATGCAAGCGATCAGCTGCAGCACCAGCTACAACTGCACCAGCAacagttgcagcagcagcagcagcaacagcagcagcaacagcagcagcaacagcagcagcaacaacggcagcagGATAGCGAAAGGCCAGAAGTGCCCGAAGAAGGCACGCAACTGCAGCTAACAGTGACCAAGTGA
Protein Sequence
MCSASMGAEGSVTLQLREAVQAPDAAGSLDGALTIGYPDPDMLADMLGTFQGASTGASGDPDAGSFELLQDSNGSPAGATLRTSAAEQLEQLAGAILTKANSSGSSSSNATTGATTVTIKTEPGPKSTAEKTSTTTNLHPTGLTPTSSIGSSNLSPSSTAILHHGTTMVTVKSSPGGSGGTIATAASPTSLILTTVGRAETASGGFGGGSSSSASSSPSAAASPVSLSGLAKKPRPKTVSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSALGLANSSGTASPGPGGSNAGPPGGLSLSPATASGDASSPHGATLVQYTTTTGSGTPGSSSSNCSLSSSSSSSSSSSSSSSSSSSSSGNVSDSSSSCKSPSPSSPAPGAGNEGLTRQQLDLISQIMQQTKQANAAAAAAAAAAATSTTTNGSSSVQSTSQKLSASTTVAATTAPTVVSAVPVPSMAVTATTTLSASNSGATIVYQNGGTLSGNGSSIISKATNAGSASADPNGPVTATLTVSSSSAASTSSLSAVSAVSATTLTAGTAGPGSGSSSAAAAGAAATQQPATGTTATTTTTTTTTTATKLEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSEAKKCDKKENTGPPLQTASVGVRALIEEKIINKRSKDLKYAICCFACPKEFWCIILTLRTSLLKRSLTLHASIHLSSLSLSLPFRSLMCCGIFLLYFFFHSVYQFRATPAAFATVAIVSTSNGTTQIINTATLHSKATVLSVSSAPPPSNNTTTSTTLAPSITINGLGAAGAATELKDATLIELLKRGTKVAVKRAMASGDTSTVLSLQSQATPNPTVTVVSTASSTNPAQLLTSANTRTLTVVPTGPTLSTSTTTGKQSGQTIAGPTLLANATASTEPTPLSLTISQAPATTPGDVFTLAYSTDFGDGDVYSVSDTAMLLQAVDPIQLLHDSNSAEPLDEIALSDYGSISDQGFTPSRQIQAVLDSPLPEGLAEFSALHGKDFSVLYGGTGAPSSEPNGSSSTTNTSALLQSSPSGAHLSPLPSPLAYPTPPASHEAVAQASPFLDDSRHFTDAGSFFDDKRSAQSFLDDGFFKTEPKDGDCKASESAKILALKHELLDENHDLFRANKHHLLDEHCSELFKTEDGFFAESKPSADGTSKMNLDFLDDAQVFIEETRNASSPLSNAFFSATMSSAAEVKEALDEVLPNDDDDDIGVSEGDIDLYYLNGLSSLQSQMMPNSDDPLLSSSPKDFAHRQHQKFLFEQSQAAQQQQLAQHQQQLQQQQQQQQQQQQQQLQQQQQQQAGVTTTTTNHHCMPPSAKKSKPSDVEASGTFGADASKAPLTVQTDPMPKDADSVFLSPSSLSSHSCSSSSSSSSSLSLSSVASPRLQHALLGSAHPAAGGVVWPRKRSQTSASSQSPSANSAAGTTPSHPAGQRKPTVYLSKLRRSTASLLPALHYTPAPMLNPERCGTAGLYASAAGGSVVEPDLDSTMDSTSDIFSEPPLPIRPRINLGPDYQATLPDCTRPAYAAPFQPGVPPVQRLWDPALAPNDRQLQRFIELARSSAAPLGCHSEENALRALLEANGEIHQAILGMLQGPPATIHRRWTADEIEQLIQGLEEYGKDFHRIARDLLPGKSTGDCVQMYYFWKKLGIDYGKGTTALAAGPKYGGLHGALSPTPSPPAPTPPVEDLLLDHLDYTASASAGATMPRGQQAGGSNSGHLQPNGHGSSTASDVRPHVCEVPDCSASFSSKAALHGHIRIHCIGRNHSTVQNGNFLSAAGNPINPNHIPTKDDYPCKVCGKVFNKVKSRSAHMKSHRPQDASDQLQHQLQLHQQQLQQQQQQQQQQQQQQQQQQQRQQDSERPEVPEEGTQLQLTVTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00093399;
90% Identity
iTF_00093745;
80% Identity
iTF_00102602;