Basic Information

Gene Symbol
RERE
Assembly
GCA_016920715.1
Location
NC:14060337-14236192[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.8e-11 5e-08 32.4 0.1 2 45 1656 1700 1655 1701 0.91

Sequence Information

Coding Sequence
ATGGCTGCTGTAAACTCGGTCCAGAACAGCATTCGGTTGCCGTTGGCCGGCCTGGCGCCTCCGCGCGTCCTCATGTGTAGTGCCTCGATGGGTGCGGAAGGTTCCGTCACACTTCAGCTCCGGGAAGCGGTACAGGCGCCCGATGCGGCCGGCTCGCTCGACGGAGCGCTCACGATCGGCTACCCGGATCCGGACATGCTAGCCGACATGCTGGGCACATTCCAGGGCGCATCGACCGGTGCGTCCGGCGATCCGGACGCGGGCAGCttcgagctgctgcaggaCAGCAATGGCAGTCCGGCCGGCGCTACCTTGCGCACGTCGGCAGCcgagcagctcgagcagctggcCGGTGCTATCCTGACCAAGGCGAACAGCAgtggtagcagtagcagcaacgcGACAACCGGTGCGACAACGGTGACGATAAAAACAGAACCGGGGCCGAAATCAACCGCGGAAAAAACGAGCACAACCACCAACCTGCACCCGACCAGCCTCACGCCCACCAGTagcatcggcagcagcaacctGTCTCCCTCGTCGACGGCCATCTTGCACCACGGCACCACGATGGTGACCGTGAAAAGCTCGCCCGGAGGAAGCGGCGGTACCATTGCGACCGCCGCCAGCCCAACCAGCCTCATCCTTACGACGGTCGGTCGGGCCGAGACGGCGTCGGGCGGTTTCGGtggaggcagcagcagcagcgcatcgTCGTCACCGTCGGCGGCTGCCTCCCCCGTCTCGCTGAGCGGACTGGCGAAGAAACCGCGACCCAAGACGGTATCACCGACCCGGCACGGACCGCAACAGTGTCAGGTCTGCAGCAAAGTGTTCGGCAATGCGTCCGCCCTCGCCAAACACAAGCTAACGCACAGCGACGAGCGGAAGTACGTGTGTGGCATGTGCTCGAAAGCGTTCAAGCGGCAGGATCACCTCAATGGCCATATGCTGACGCATCGTAACAAAAAACCGTACGAGTGCAAGGCGGACGGCTGCGGCAAATCGTACTGTGATGCGCGATCGCTCCGGCGCCACACCGAGAACCACCACAGTGCGCTCGGGCTGGCCAACTCGTCCGGCACGGCCAGCCCCGGCCCGGGTGGCAGCAATGCTGGACCGCCCGGGGGGCTCAGTCTGTCACCGGCGACGGCAAGTGGCGATGCGAGCTCACCGCACGGAGCAACACTGGTCCAGTACACGACCACGACCGGCAGCGGAAcgcccggcagcagcagctctaaCTGCAGTCTTTCGAGCAGCAGTTCGAGCAGTAGCTcgagtagtagcagcagcagcagcagcagcagtagcagtggaAACGTCAGCGACTCTAGCTCCAGCTGCAAATCGCCCTCGCCAAGCTCGCCGGCACCCGGCACAGGCAATGAGGGACTTACCCGCCAACAGCTCGATCTAATTTCCCAGATCATGCAGCAGACGAAGCAGGCGAATgcggcagctgctgcagccgccgccgccgccgccgctaccaccaccaccacgaacgGTAGCAGCTCGGTACAGTCCACCAGCCAGAAGGTCCCGGTACGACCCCGCACTTGGAATATGCAGCTGCAGCTCAGCCAGAACAAGCTATCCGCATCGACCACGGTGGCAGCGACGACAGCACCGACGGTCGTCAGCGCCGTCCCCGTGCCTTCAATGGCAGTCACAGCGACGACCACACTCTCCGCCTCGAACAGTGGCGCCACCATCGTGCACCAGAACGGAGGAACCCTTAgcggcaacggcagcagcatcatgaGCAAGGCGACAAACGCTGGCAGTGCTAGTGCCGATCCTAATGGACCGGTGACGGCAACCCTCACGGTGTCTTCGTCGTCTGCGGCCAGTACGTCCTCGCTCAGTGCGGTCAGTGCGGTTTCGGCGACCACGCTGACGGCTGGGACAGCAGGACCGGGTAGTGGCAgctcttctgctgctgctgctgctgctgctgctacccaACAAGCTGCCACCGGTACCACCGCTACCACaaataccaccaccaccactacgacCGCTACCAAGCTGGAGCAGAAGCCGGTCGAGTGTAATCTGTGCCACCGGAAGTTCAAAAATATTCCCGCCCTGAACGGGCACATGCGACTGCACGGCGGCTACTTCAAGAAGGACTCGGAGGCGAAGAAATGTGATAAGAAGGAAAACACGGGCCCCCCGCTACAGACGGCGAGCGTGGGCGTGCGGGCACTGATCGAGGAGAAGATTATCAACAAGCGCAGCAAGGATTTGAAGAATCTCTTGTTGAAGGGTTCGTTCGTGGTGCCGGCACCGCCGCTCACCGCCCGCCGGCTGATCGACGCCAACGAAGCATTCCTCTCGTCCAAACCGAGCACGGTCGCGATCGTCTCCACGTCGAACGGCACCACGCAGATCATCAACACCGCCACCCTGCACTCCAAGGCGACCGTGCTGAGCGTCAGCAGTGCGCCGCCGCCCTctaacaacaccaccacctccaccaccctCGCGCCCTCGATAACGATCAACGGGCTGGGGGCGGCGGGCGCAGCAACGGAGCTGAAGGATGCGACGCTCATCGAACTGCTCAAGCGCGGCACCAAGGTGGCCGTGAAGCGGGCGATGGCGAGCGGTGACACCTCCACCGTGCTCTCACTACAGCCACAAGCCACGCCCAACCCAACGGTGACGGTGGTTTCGACCGCGAGCAGCACCAACCCTGCCCAGCTGCTCACGTCCGCCAACACGCGCACGCTTACGGTTGTCCCGACCGGCCCAACGctttccaccagcaccaccaccggcaagcAGTCCGGTCAAACGATCGCCGGCCCAACCCTGCTGGCCAATGCCACCGCCAGCACCGAGCCGACGCCCCTGTCGCTAACCATATCGCAAGCGCCGGCCACGACCCCCGGCGACGTGTTCACCCTCGCCTACTCGACCGACTTCGGCGACGGCGATGTGTACAGCGTGAGCGACACCGCCATGCTGCTGCAGGCCGTCGATCCGATCCAGCTGCTGCACGACTCCAACTCGGCCGAGCCGCTCGACGAGATCGCCCTGTCCGACTACGGCTCGATCAGCGACCAGGGCTTCACCCCGTCCCGCCAAATCCAGGCCGTGCTCGACTCGCCCCTGCCCGAGGGATTGGCCGAGTTTAGCGCCCTGCACGGCAAGGACTTTAGCGTCCTGTACGGTGGCACCGGTGCGCCCTCCAGCGAAccgaacggcagcagcagcaccaccaacaccagcgCCCTACTACAATCATCCCCCTCGGGGGCGCATCTTTCCCCGCTACCCTCACCGCTAGCCTACCCAACGCCACCGGCATCGCACGAAGCGGTCGCTCAAGCGTCGCCCTTCCTGGACGACTCGCGCCACTTCACCGACGCGGGCTCCTTCTTCGACGACAAGCGCAGTGCGCAAAGCTTTCTGGACGATGGTTTCTtcaaaaccgaaccgaaggaCGGCGACTGCAAGGCGTCCGAGAGCGCGAAGATACTGGCGCTCAAGCACGAGCTGCTGGACGAAAACCACGACCTGTTCCGGGCGAACAAACACCACCTGCTGGACGAGCACTGCTCGGAGCTGTTCAAGACGGAGGACGGGTTCTTCGCCGAGTCGAAACCGTCGGCGGACGGGACGTCCAAGATGAACCTGGACTTTCTGGACGACGCGCAGGTGTTTATTGAGGAGACGCGCAACGCGTCCTCCCCGCTGTCGAATGCCTTCTTCTCCGCCACCATGTCGTCGGCGGCGGAGGTAAAGGAGGCGCTCGACGAGGTCCTGCcgaacgatgacgatgacgacatTGGCGTGTCCGAGGGCGACATCGACCTGTACTACCTGAACGGCCTTTCCTCGCTGCAGTCGCAGATGATGCCCAACTCGGACGATCCGCTGCTGTCCTCCTCGCCGAAGGACTTTGCCCACCGGCAGCACCAGAAGTTTCTGTTCGAGCAGAGCCAGgcggcccagcagcagcagctcgcccagcatcagcagcagctgcagcagcagcagcagcagcagcaacagcagcaactgcagcagcagcagcagcagcaacaagcgggtgttaccaccaccaccaccaaccaccactgTATGCCTCCCAGTGCCAAAAAGTCCAAACCTTCCGACGTGGAAGCGAGCGGCACGTTCGGGGCGGACGCCAGCAAAGCACCACTCACGGTCCAAACCGACCCGATGCCAAAGGATGCCGACAGCGTGTTTCTCAGCCCGAGCAGCCTGTCCTCGCACAGCTGCTCCTCCtcttcgtcctcctcctcgctaTCGCTCTCGTCCGTAGCTTCGCCCCGGCTGCAGCATGCACTGCTGGGCAGTGCCCACCCGGCCGCCGGTGGTGTCGTGTGGCCCCGCAAACGCTCCCAAACATCAGCGTCCTCACAGTCGCCCTCAGCCAACAGTGCCGCCGGGACCACCCCATCCCATCCCGCCGGTCAGCGCAAGCCGACGGTCTATCTGTCGAAGCTGCGACGCTCCACGGTGGCACTGCTGCCCGCCCTGCATTACACGCCCGCCCCAATGCTCAACCCGGAACGGTCCGGCACGGCCGGGCTGTACGCGAGCGCGGCCGGCGGCTCGGTCGTCGAGCCCGATCTCGACTCCACGATGGACAGCACGAGCGATATCTTTTCCGAGCCGCCGCTGCCGATCCGGCCGCGCATCAACCTCGGCCCCGACTATCAGGCGACCTTGCCGGACTGTACGCGCCCGGCCTACGCGGCGCCGTTCCAGCCGGGCGTCCCGCCGGTGCAGCGGCTCTGGGATCCGGCGCTCGCGCCAAACGACCGCCAGCTGCAGCGGTTCATCGAGCTGGCCCGTTCGTCCGCCGCACCGCTGGGTTGCCACTCGGAGGAGAATGCACTGCGCGCCCTGCTGGAGGCGAACGGTGAGATACACCAGGCGATACTGGGCATGCTGCAGGGCCCGCCCGCCACCATCCATCGCCGGTGGACGGCGGACGAGATCGAGCAGCTGATACAGGGGCTGGAAGAGTACGGCAAGGACTTCCACCGGATCGCTCGCGATCTGCTGCCCGGCAAGTCGACGGGCGATTGCGTGCAGATGTACTACTTCTGGAAGAAGCTCGGCATCGACTACGGCAAGGGTACGACGGCGCTGGCTGCCGGGCCGAAGTACGGTGGGCTGCATGGGGCGCTTTCGCCTACACCGTCACCACCGGCACCAACGCCCCCGGTAGAGGATCTGCTGCTCGATCATCTCGACTATACGGCCTCGGCAAGCGCGGGAGCGACGATGCCCCGGGGGCAACAGGCTGGCGGGTCAAACAGTGGCCATTTGCAGCCGAATGGGCACGGTAGTAGCACGGCCAGCGACGTCCGACCGCATGTGTGCGAGGTTCCTGACTGTTCAGCGAGCTTCTCGTCCAAAGCGGCCCTGCACGGGCACATTCGCATACACTGCATCGGGCGTAACCACAGCACAGTTCAAAATGGGTATTCAATAAGGTAA
Protein Sequence
MAAVNSVQNSIRLPLAGLAPPRVLMCSASMGAEGSVTLQLREAVQAPDAAGSLDGALTIGYPDPDMLADMLGTFQGASTGASGDPDAGSFELLQDSNGSPAGATLRTSAAEQLEQLAGAILTKANSSGSSSSNATTGATTVTIKTEPGPKSTAEKTSTTTNLHPTSLTPTSSIGSSNLSPSSTAILHHGTTMVTVKSSPGGSGGTIATAASPTSLILTTVGRAETASGGFGGGSSSSASSSPSAAASPVSLSGLAKKPRPKTVSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSALGLANSSGTASPGPGGSNAGPPGGLSLSPATASGDASSPHGATLVQYTTTTGSGTPGSSSSNCSLSSSSSSSSSSSSSSSSSSSSSGNVSDSSSSCKSPSPSSPAPGTGNEGLTRQQLDLISQIMQQTKQANAAAAAAAAAAAATTTTTNGSSSVQSTSQKVPVRPRTWNMQLQLSQNKLSASTTVAATTAPTVVSAVPVPSMAVTATTTLSASNSGATIVHQNGGTLSGNGSSIMSKATNAGSASADPNGPVTATLTVSSSSAASTSSLSAVSAVSATTLTAGTAGPGSGSSSAAAAAAAATQQAATGTTATTNTTTTTTTATKLEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSEAKKCDKKENTGPPLQTASVGVRALIEEKIINKRSKDLKNLLLKGSFVVPAPPLTARRLIDANEAFLSSKPSTVAIVSTSNGTTQIINTATLHSKATVLSVSSAPPPSNNTTTSTTLAPSITINGLGAAGAATELKDATLIELLKRGTKVAVKRAMASGDTSTVLSLQPQATPNPTVTVVSTASSTNPAQLLTSANTRTLTVVPTGPTLSTSTTTGKQSGQTIAGPTLLANATASTEPTPLSLTISQAPATTPGDVFTLAYSTDFGDGDVYSVSDTAMLLQAVDPIQLLHDSNSAEPLDEIALSDYGSISDQGFTPSRQIQAVLDSPLPEGLAEFSALHGKDFSVLYGGTGAPSSEPNGSSSTTNTSALLQSSPSGAHLSPLPSPLAYPTPPASHEAVAQASPFLDDSRHFTDAGSFFDDKRSAQSFLDDGFFKTEPKDGDCKASESAKILALKHELLDENHDLFRANKHHLLDEHCSELFKTEDGFFAESKPSADGTSKMNLDFLDDAQVFIEETRNASSPLSNAFFSATMSSAAEVKEALDEVLPNDDDDDIGVSEGDIDLYYLNGLSSLQSQMMPNSDDPLLSSSPKDFAHRQHQKFLFEQSQAAQQQQLAQHQQQLQQQQQQQQQQQLQQQQQQQQAGVTTTTTNHHCMPPSAKKSKPSDVEASGTFGADASKAPLTVQTDPMPKDADSVFLSPSSLSSHSCSSSSSSSSLSLSSVASPRLQHALLGSAHPAAGGVVWPRKRSQTSASSQSPSANSAAGTTPSHPAGQRKPTVYLSKLRRSTVALLPALHYTPAPMLNPERSGTAGLYASAAGGSVVEPDLDSTMDSTSDIFSEPPLPIRPRINLGPDYQATLPDCTRPAYAAPFQPGVPPVQRLWDPALAPNDRQLQRFIELARSSAAPLGCHSEENALRALLEANGEIHQAILGMLQGPPATIHRRWTADEIEQLIQGLEEYGKDFHRIARDLLPGKSTGDCVQMYYFWKKLGIDYGKGTTALAAGPKYGGLHGALSPTPSPPAPTPPVEDLLLDHLDYTASASAGATMPRGQQAGGSNSGHLQPNGHGSSTASDVRPHVCEVPDCSASFSSKAALHGHIRIHCIGRNHSTVQNGYSIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00093745;
80% Identity
iTF_00093745;