Afun011711.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- nfxl1
- Assembly
- None
- Location
- Contig0:43105639-43110358[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.92 6.8e+03 -3.0 1.4 14 19 218 223 218 223 0.86 2 14 0.095 7.1e+02 0.1 0.5 4 10 254 260 253 260 0.95 3 14 2.7e-08 0.0002 21.0 17.9 1 19 268 285 268 285 0.99 4 14 2.6e-05 0.2 11.5 16.6 1 19 321 340 321 340 0.97 5 14 1.2e-05 0.089 12.6 13.9 1 19 375 393 375 393 0.98 6 14 1.1 8.3e+03 -3.3 0.4 6 10 419 423 418 426 0.48 7 14 1.2e-05 0.087 12.6 15.2 1 18 429 446 429 447 0.92 8 14 3.7e-06 0.027 14.2 15.2 1 18 481 498 481 499 0.97 9 14 9.8e-10 7.3e-06 25.6 13.6 1 18 508 525 508 526 0.97 10 14 0.00026 1.9 8.3 5.3 9 19 572 582 570 582 0.89 11 14 0.091 6.8e+02 0.2 5.2 3 12 595 604 584 604 0.86 12 14 4.4e-05 0.33 10.8 5.1 1 12 675 686 675 686 0.97 13 14 0.0027 20 5.1 14.5 3 18 715 730 714 731 0.91 14 14 3.3e-06 0.024 14.4 10.4 1 16 788 802 788 808 0.92
Sequence Information
- Coding Sequence
- ATGGCATATCGTAATCGTAGCAAAATCGTCCCAAAAGAGCCAAACGCCTGGAATGTGCCCGTACAACCAAAGCCCGACCATGTCGGTGGAAAGACCCGCAAAACATCTACAGGCAGTACTTCCAAGTTAGCGCCACCCTCCGGAACACCGGAACAAAACGTTAGCGGGTCGAAAATCCCTTTACCTACCGCGTCGTCGAGTATGTTGAAAAAATCGCAGGACAAGTTTAATCAGGTGCAACGTCAGCACGCAGAAAAGGCAAAAAAGTATGCCGTCGAGTACGTGTCGAGCGACGATGACGAGGAGCAGGACGAAACCAACGGGGAAGATGGTGATGTGGCCACCCGAAATATACTTGGTGATGTACTGAAAAATTATCACGGTATCGACGCGGATGTGGGCAAAACGCAGGAATATTTGCAAAATCTGCTCGAATCGCGCAATGCCGTGTGCCTGATCTGCATCGAGACGGTGAAACGAGCGGACAGGATCTGGTCCTGCAGCGCGTGCTACACGTTCTTTCACCTCATGTGCATTCAGCGATGGGCTAATGATAGCATGTCCATGAAGCGCATTACCCACGAGCAGCAGGAGGGCTACTACAACAACCGCGGCGAATACATTCCGAAGCCAGCACTTAACGTGCAGTGGGACTGCCCGAAGTGTCGTCGGGAGTATTTGCCGGAGGAAATACCACGCCACTATGAGTGCTTCTGCGGTAAGGAGCGAGACCCAAGTGCGCACCCCTGGATGATACCGCACTCGTGCGGAGAACCGTGCGAAAAGAAGCTCGCTCCAGCCTGTGGTCACACGTGTCGGCTACTATGCCATCCAGGACCGTGTCCACCGTGTCCGCAGACGATTAATGTTTCATGTCGTTGCGGGTGTTCGCCGGTGAAAACAATTCGATGCGCACAAAAATCGTGGATATGTACCAAAAAGTGTAAACGGACGTTGAGCTGCGGAATACATGAATGTGGCACCCAATGTCACGATCCCGGCAGCTGTCCACCGTGTCAGAACCGTAGCGACCAACCGTGTCTTTGTGGGGCACTTACCAAAGAAGTCAACTGTCACGAATCACGCTGGCAGTGTGGTACAGTATGTAATAGACCATTATCATGTGGCCTACATCATTGCGATCGTGTTTGTCATGCTGATCCTTGTGGTGATTGCCCACTGGGATTGCCACGGTCATGCCCGTGCGGTAAATCGGAAACTAGAGCCGCATCCTGCGCCGAACGTATCGGAACATGTGGTGATACGTGCGAGAAATTGCTTGTCTGTGAACAACACCGCTGTCCGGAACGATGCCATCAAGGACCGTGTGGAAACTGCTTGGAGCTCGTCCCAAAAGTTTGCCGTTGCGGTTCAACAAAGAAGCCGATCGCATGTCACCGGGAGGCTATTTGCGAGGGCCGATGCAAGCGGATGCGTAACTGTGGAAAGCACCAGTGCAATCGGAAATGCTGCGATGGACAGTGTCAGCTATGTGATAGAGTGTGCGGTAAGACATTACCCTGCGGAAAGCATAAATGCAGTTCACTTTGTCATCAAGGTCCGTGTTATCCGTGTAATCAAAAATCGAGCGTAAAATGTCGTTGTGGCGGTACTACAGTCGAAGTGGCGTGTGGCCGTGAAAGAAAAGCGAATGCTCCTAAATGCAACCTACCTTGCCGGGTGGCTTCTAAGTGTCATCATCCTAATACCCACTCCTGCCACACTGGAGAATGCCCAGCTTGCACGCAGCCTTGCGGTGAGCGGAATGATACAACCAACTGTGAACATCCTTGCCGGGCAAAATGCCACGATGCCGTTAGGGTGGTGACACGGGACAAAAATTTTAAACCTGTTGGTCCATGGGATGTGCCGAAAGAGATTGTTGAAGTGAAAACTTTGCCACATCCAGCCTGTACCGAGAAGATCCCGGTCATGTGCCTTGGTGGTCATGAAACGGTTGATTGGCCGTGCTCCAACTCCAAACCTTCGTCTTGTGGTAGGCCATGCGATCGATTGCTCAAATGCGGCGTACATCGTTGTCCACTGCCTTGTCACAAAGTAACGCATCGTGCCAGTACAACGCAGGATTCACGCTGTGAGGCCTGCTCCGCCGGATGTACGCTTACCCGTCCGGCAGGATGCACTCATTCATGCACGCTTCCCTGTCATAAACCTCCATGCAATCCGTGCCTGGTGTCGATCAAAGCGCATTGCTATTGTGGTATCACGCAGGTGTTTTACAAATGTCATGAGTTTTATCCGTCCGGCATGGAGGACAAAGGATCGCAAGAGTTGGCCGAGCTGGATCGTCGTCGTGAATCTTTTCTGAGCTGTGGCCAAAAATGTATCAAAAATTTTCCTTGCGGGCATCGCTGCTTTTCTATCTGTCATCCGGGAAGATGTCCCAATCCGGAGCTGTGTTCCAAGAAGGTTAAGATAAGCTGCAAATGTACCCATCGTAAGGCAGAAGTAAGTTGTAAGATGGCGCGTAGCAATCCGACGCTCGACTGTGACCAGCAGTGTGAAGCCATCAGAGCTCAGAAGCAGGAGGAGCAGGACCGCAAGGAACGAGAGGCAAGGGCCCAGCAGGAGCTCGAGAATCAGCGCGAATTGGACGAGTACGAACGTAAATTTAACAAACGAAAATATCGTGAACGAAAGCGTCATCAGGTGCAGCAGGAGGAAACAGGAAGACATTGGGCTGTATACGTGCTGCCGGTTGTTGCTGTGTTGATAGGTGTAGCTGCATATATTTTGTTTACGGAATAA
- Protein Sequence
- MAYRNRSKIVPKEPNAWNVPVQPKPDHVGGKTRKTSTGSTSKLAPPSGTPEQNVSGSKIPLPTASSSMLKKSQDKFNQVQRQHAEKAKKYAVEYVSSDDDEEQDETNGEDGDVATRNILGDVLKNYHGIDADVGKTQEYLQNLLESRNAVCLICIETVKRADRIWSCSACYTFFHLMCIQRWANDSMSMKRITHEQQEGYYNNRGEYIPKPALNVQWDCPKCRREYLPEEIPRHYECFCGKERDPSAHPWMIPHSCGEPCEKKLAPACGHTCRLLCHPGPCPPCPQTINVSCRCGCSPVKTIRCAQKSWICTKKCKRTLSCGIHECGTQCHDPGSCPPCQNRSDQPCLCGALTKEVNCHESRWQCGTVCNRPLSCGLHHCDRVCHADPCGDCPLGLPRSCPCGKSETRAASCAERIGTCGDTCEKLLVCEQHRCPERCHQGPCGNCLELVPKVCRCGSTKKPIACHREAICEGRCKRMRNCGKHQCNRKCCDGQCQLCDRVCGKTLPCGKHKCSSLCHQGPCYPCNQKSSVKCRCGGTTVEVACGRERKANAPKCNLPCRVASKCHHPNTHSCHTGECPACTQPCGERNDTTNCEHPCRAKCHDAVRVVTRDKNFKPVGPWDVPKEIVEVKTLPHPACTEKIPVMCLGGHETVDWPCSNSKPSSCGRPCDRLLKCGVHRCPLPCHKVTHRASTTQDSRCEACSAGCTLTRPAGCTHSCTLPCHKPPCNPCLVSIKAHCYCGITQVFYKCHEFYPSGMEDKGSQELAELDRRRESFLSCGQKCIKNFPCGHRCFSICHPGRCPNPELCSKKVKISCKCTHRKAEVSCKMARSNPTLDCDQQCEAIRAQKQEEQDRKEREARAQQELENQRELDEYERKFNKRKYRERKRHQVQQEETGRHWAVYVLPVVAVLIGVAAYILFTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104083;
- 90% Identity
- -
- 80% Identity
- -